Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:45:47 (2869215): wrapper (7.7.26015): starting
16:45:47 (2869215): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:45:47] Arguments: --nthreads 8
[2025-11-26 16:45:47] Threads: 8
[2025-11-26 16:45:47] Checking for CVMFS
[2025-11-26 16:45:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:45:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:45:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:45:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:45:48] 2.13.3.0 12846 30561 262360 153335 2 690 29724799 32935936 36477 16776704 0 161413515 99.493 202537525 38235 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:45:48] CVMFS is ok
[2025-11-26 16:45:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:45:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:45:48] Further information can be found at the LHC@home message board.
[2025-11-26 16:45:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:45:48] Checking for apptainer binary...
[2025-11-26 16:45:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:45:48] Running /usr/bin/apptainer --version
[2025-11-26 16:45:48] apptainer version 1.4.4-1.el9
[2025-11-26 16:45:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:45:48] c7-16-9.aglt2.org
[2025-11-26 16:45:48] apptainer works
[2025-11-26 16:45:48] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:45:48] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:45:48] Starting ATLAS job with PandaID=6892534825
[2025-11-26 16:45:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:05:53]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:05:53] 2025-11-27 13:05:05,491 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6892534825/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 08:05:53] 2025-11-27 13:05:05,495 | INFO     | extracted standard info from prmon json
[2025-11-27 08:05:53] 2025-11-27 13:05:05,495 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:05:53] 2025-11-27 13:05:05,495 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:05:53] 2025-11-27 13:05:05,529 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:05:53] 2025-11-27 13:05:05,530 | INFO     | sum of square deviations: 228312568102.55334
[2025-11-27 08:05:53] 2025-11-27 13:05:05,549 | INFO     | sum of deviations: 2259750463574.5576
[2025-11-27 08:05:53] 2025-11-27 13:05:05,549 | INFO     | mean x: 1764221130.0908084
[2025-11-27 08:05:53] 2025-11-27 13:05:05,549 | INFO     | mean y: 2961049.1395348837
[2025-11-27 08:05:53] 2025-11-27 13:05:05,549 | INFO     | intersect: -17458624835.96159
[2025-11-27 08:05:53] 2025-11-27 13:05:05,559 | INFO     | chi2: 5.244038973104986
[2025-11-27 08:05:53] 2025-11-27 13:05:05,560 | INFO     | sum of square deviations: 224541160594.06995
[2025-11-27 08:05:53] 2025-11-27 13:05:05,609 | INFO     | sum of deviations: 2552928569080.2505
[2025-11-27 08:05:53] 2025-11-27 13:05:05,629 | INFO     | mean x: 1764220977.5968819
[2025-11-27 08:05:53] 2025-11-27 13:05:05,630 | INFO     | mean y: 2972900.732739421
[2025-11-27 08:05:53] 2025-11-27 13:05:05,630 | INFO     | intersect: -20055399132.09052
[2025-11-27 08:05:53] 2025-11-27 13:05:05,631 | INFO     | chi2: 2.300411389715138
[2025-11-27 08:05:53] 2025-11-27 13:05:05,631 | INFO     | current chi2=2.300411389715138 (change=56.13283193520836 %)
[2025-11-27 08:05:53] 2025-11-27 13:05:05,632 | INFO     | sum of square deviations: 220811521310.52362
[2025-11-27 08:05:53] 2025-11-27 13:05:05,708 | INFO     | sum of deviations: 2568626901512.435
[2025-11-27 08:05:53] 2025-11-27 13:05:05,708 | INFO     | mean x: 1764220825.1030235
[2025-11-27 08:05:53] 2025-11-27 13:05:05,708 | INFO     | mean y: 2973535.875699888
[2025-11-27 08:05:53] 2025-11-27 13:05:05,709 | INFO     | intersect: -20519619871.718018
[2025-11-27 08:05:53] 2025-11-27 13:05:05,709 | INFO     | chi2: 2.144561945250351
[2025-11-27 08:05:53] 2025-11-27 13:05:05,722 | INFO     | current chi2=2.144561945250351 (change=6.774851018455706 %)
[2025-11-27 08:05:53] 2025-11-27 13:05:05,722 | INFO     | right removable region: 892
[2025-11-27 08:05:53] 2025-11-27 13:05:05,723 | INFO     | sum of square deviations: 224540669546.45422
[2025-11-27 08:05:53] 2025-11-27 13:05:05,787 | INFO     | sum of deviations: 2031189609135.2156
[2025-11-27 08:05:53] 2025-11-27 13:05:05,799 | INFO     | mean x: 1764221282.5946548
[2025-11-27 08:05:53] 2025-11-27 13:05:05,799 | INFO     | mean y: 2970273.0445434297
[2025-11-27 08:05:53] 2025-11-27 13:05:05,799 | INFO     | intersect: -15956133904.651415
[2025-11-27 08:05:53] 2025-11-27 13:05:05,800 | INFO     | chi2: 3.2198320706221795
[2025-11-27 08:05:53] 2025-11-27 13:05:05,800 | INFO     | current chi2=3.2198320706221795 (change=38.60014986281227 %)
[2025-11-27 08:05:53] 2025-11-27 13:05:05,801 | INFO     | sum of square deviations: 220810593994.52444
[2025-11-27 08:05:53] 2025-11-27 13:05:05,821 | INFO     | monitor loop #3416: job 0:6892534825 is in state 'finished'
[2025-11-27 08:05:53] 2025-11-27 13:05:05,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:05:53] 2025-11-27 13:05:05,852 | INFO     | sum of deviations: 1979436211655.374
[2025-11-27 08:05:53] 2025-11-27 13:05:05,852 | INFO     | mean x: 1764221435.0974245
[2025-11-27 08:05:53] 2025-11-27 13:05:05,852 | INFO     | mean y: 2972387.4669652856
[2025-11-27 08:05:53] 2025-11-27 13:05:05,852 | INFO     | intersect: -15812228010.467974
[2025-11-27 08:05:53] 2025-11-27 13:05:05,861 | INFO     | chi2: 3.206710276842429
[2025-11-27 08:05:53] 2025-11-27 13:05:05,861 | INFO     | current chi2=3.206710276842429 (change=0.4075303771110877 %)
[2025-11-27 08:05:53] 2025-11-27 13:05:05,861 | INFO     | left removable region: 20
[2025-11-27 08:05:53] 2025-11-27 13:05:05,862 | INFO     | sum of square deviations: 205596252325.21054
[2025-11-27 08:05:53] 2025-11-27 13:05:05,917 | INFO     | sum of deviations: 2194288118302.5867
[2025-11-27 08:05:53] 2025-11-27 13:05:05,917 | INFO     | mean x: 1764221404.6112385
[2025-11-27 08:05:53] 2025-11-27 13:05:05,917 | INFO     | mean y: 2988581.756880734
[2025-11-27 08:05:53] 2025-11-27 13:05:05,917 | INFO     | intersect: -18826197370.864914
[2025-11-27 08:05:53] 2025-11-27 13:05:05,918 | INFO     | chi2: 0.0810073098348477
[2025-11-27 08:05:53] 2025-11-27 13:05:05,918 | INFO     | current memory leak: 10.67 B/s (using 872 data points, chi2=0.08)
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | could have reported an average CPU frequency of 3107 MHz (34 samples)
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | ..............................
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | . Timing measurements:
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | . get job = 0 s
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | . initial setup = 2 s
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | . payload setup = 13 s
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | . stage-in = 0 s
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | . payload execution = 55074 s
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | . stage-out = 5 s
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | . log creation = 1 s
[2025-11-27 08:05:53] 2025-11-27 13:05:05,919 | INFO     | ..............................
[2025-11-27 08:05:53] 2025-11-27 13:05:05,951 | INFO     | time since job start (55134s) is within the limit (172800.0s)
[2025-11-27 08:05:53] 2025-11-27 13:05:06,367 | INFO     | 
[2025-11-27 08:05:53] 2025-11-27 13:05:06,367 | INFO     | job summary report
[2025-11-27 08:05:53] 2025-11-27 13:05:06,367 | INFO     | --------------------------------------------------
[2025-11-27 08:05:53] 2025-11-27 13:05:06,367 | INFO     | PanDA job id: 6892534825
[2025-11-27 08:05:53] 2025-11-27 13:05:06,367 | INFO     | task id: 47493029
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | errors: (none)
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | pilot state: finished 
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | transexitcode: 0
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | exeerrorcode: 0
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | exeerrordiag: 
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | exitcode: 0
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | exitmsg: OK
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | cpuconsumptiontime: 205921 s
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | nevents: 1000
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | neventsw: 0
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | pid: 2882444
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | pgrp: 2882444
[2025-11-27 08:05:53] 2025-11-27 13:05:06,368 | INFO     | corecount: 8
[2025-11-27 08:05:53] 2025-11-27 13:05:06,373 | INFO     | event service: False
[2025-11-27 08:05:53] 2025-11-27 13:05:06,373 | INFO     | sizes: {0: 2284304, 1: 2284304, 8: 2284594, 11: 2284622, 55093: 2335851, 55094: 2335850, 55099: 2345028, 55102: 2345084, 55112: 2345330}
[2025-11-27 08:05:53] 2025-11-27 13:05:06,373 | INFO     | --------------------------------------------------
[2025-11-27 08:05:53] 2025-11-27 13:05:06,373 | INFO     | 
[2025-11-27 08:05:53] 2025-11-27 13:05:06,373 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 08:05:53] 2025-11-27 13:05:06,426 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,426 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,426 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,426 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,427 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:05:53] 2025-11-27 13:05:06,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:05:53] 2025-11-27 13:05:06,428 | INFO     | job 6892534825 has completed (purged errors)
[2025-11-27 08:05:53] 2025-11-27 13:05:06,428 | INFO     | overall cleanup function is called
[2025-11-27 08:05:53] 2025-11-27 13:05:07,448 | INFO     | --- collectZombieJob: --- 10, [2882444]
[2025-11-27 08:05:53] 2025-11-27 13:05:07,448 | INFO     | zombie collector waiting for pid 2882444
[2025-11-27 08:05:53] 2025-11-27 13:05:07,448 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:05:53] 2025-11-27 13:05:07,448 | INFO     | collected zombie processes
[2025-11-27 08:05:53] 2025-11-27 13:05:07,448 | INFO     | will attempt to kill all subprocesses of pid=2882444
[2025-11-27 08:05:53] 2025-11-27 13:05:09,659 | INFO     | process IDs to be killed: [2882444] (in reverse order)
[2025-11-27 08:05:53] 2025-11-27 13:05:09,914 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:05:53] 2025-11-27 13:05:09,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:05:53] 2025-11-27 13:05:10,016 | INFO     | did not find any defunct processes belonging to 2882444
[2025-11-27 08:05:53] 2025-11-27 13:05:10,128 | INFO     | did not find any defunct processes belonging to 2882444
[2025-11-27 08:05:53] 2025-11-27 13:05:10,137 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:05:53] 2025-11-27 13:05:10,137 | INFO     | ready for new job
[2025-11-27 08:05:53] 2025-11-27 13:05:10,138 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:05:53] 2025-11-27 13:05:10,149 | INFO     | ***************************************
[2025-11-27 08:05:53] 2025-11-27 13:05:10,149 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:05:53] 2025-11-27 13:05:10,149 | INFO     | ***************************************
[2025-11-27 08:05:53] 2025-11-27 13:05:10,149 | INFO     | 
[2025-11-27 08:05:53] 2025-11-27 13:05:10,171 | INFO     | architecture information:
[2025-11-27 08:05:53] 2025-11-27 13:05:10,198 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:05:53] 2025-11-27 13:05:10,255 | INFO     | cat /etc/os-release:
[2025-11-27 08:05:53] NAME="CentOS Linux"
[2025-11-27 08:05:53] VERSION="7 (Core)"
[2025-11-27 08:05:53] ID="centos"
[2025-11-27 08:05:53] ID_LIKE="rhel fedora"
[2025-11-27 08:05:53] VERSION_ID="7"
[2025-11-27 08:05:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:05:53] ANSI_COLOR="0;31"
[2025-11-27 08:05:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:05:53] HOME_URL="https://www.centos.org/"
[2025-11-27 08:05:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:05:53] 
[2025-11-27 08:05:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:05:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:05:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:05:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:05:53] 
[2025-11-27 08:05:53] 2025-11-27 13:05:10,255 | INFO     | ***************************************
[2025-11-27 08:05:53] 2025-11-27 13:05:10,771 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 08:05:53] 2025-11-27 13:05:10,825 | INFO     | sufficient remaining disk space (66800582656 B)
[2025-11-27 08:05:53] 2025-11-27 13:05:10,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:05:53] 2025-11-27 13:05:10,826 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:05:53] 2025-11-27 13:05:10,826 | INFO     | update_server=False
[2025-11-27 08:05:53] 2025-11-27 13:05:10,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:05:53] 2025-11-27 13:05:10,858 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:05:53] 2025-11-27 13:05:10,883 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 08:05:53] 2025-11-27 13:05:10,883 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 08:05:53] 2025-11-27 13:05:10,883 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:05:53] 2025-11-27 13:05:10,883 | INFO     | will abort loop
[2025-11-27 08:05:53] 2025-11-27 13:05:11,286 | INFO     | all payload control threads have been joined
[2025-11-27 08:05:53] 2025-11-27 13:05:11,403 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:05:53] 2025-11-27 13:05:11,523 | INFO     | all data control threads have been joined
[2025-11-27 08:05:53] 2025-11-27 13:05:11,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:05:53] 2025-11-27 13:05:11,836 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:11,890 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:11,894 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:12,292 | INFO     | [payload] control thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:12,324 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:12,412 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:12,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:12,570 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:12,572 | INFO     | all job control threads have been joined
[2025-11-27 08:05:53] 2025-11-27 13:05:12,580 | INFO     | [data] control thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:12,890 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:12,958 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:12,996 | INFO     | [job] validate thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:13,303 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:13,579 | INFO     | [job] control thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:13,588 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:14,873 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:05:53] 2025-11-27 13:05:40,817 | INFO     | PID=2874194 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 08:05:53] 2025-11-27 13:05:40,818 | INFO     | .. there are 53 such processes running
[2025-11-27 08:05:53] 2025-11-27 13:05:40,819 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:05:53] 2025-11-27 13:05:40,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:05:53] 2025-11-27 13:05:40,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:05:53] 2025-11-27 13:05:47,160 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:05:53] 2025-11-27 13:05:47,635 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140606800103232)>', '<ExcThread(monitor, started 140606441494272)>']
[2025-11-27 08:05:53] 2025-11-27 13:05:47,860 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:05:53] 2025-11-27 13:05:47,861 | INFO     | [monitor] control thread has ended
[2025-11-27 08:05:53] 2025-11-27 13:05:52,661 | INFO     | all workflow threads have been joined
[2025-11-27 08:05:53] 2025-11-27 13:05:52,661 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:05:53] 2025-11-27 13:05:52,665 | INFO     | traces error code: 0
[2025-11-27 08:05:53] 2025-11-27 13:05:52,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:05:53] 2025-11-27 13:05:53,316 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:05:53] 2025-11-27 13:05:53,326 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:05:53] 2025-11-27 13:05:53,331 [wrapper] pilotpid: 2874194
[2025-11-27 08:05:53] 2025-11-27 13:05:53,342 [wrapper] Pilot exit status: 0
[2025-11-27 08:05:53] 2025-11-27 13:05:53,390 [wrapper] pandaids: 6892534825
[2025-11-27 08:05:53] 2025-11-27 13:05:53,530 [wrapper] cleanup supervisor_pilot 3620974 2874195
[2025-11-27 08:05:53] 2025-11-27 13:05:53,535 [wrapper] Test setup, not cleaning
[2025-11-27 08:05:53] 2025-11-27 13:05:53,538 [wrapper] apfmon messages muted
[2025-11-27 08:05:53] 2025-11-27 13:05:53,542 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:05:53] 2025-11-27 13:05:53,545 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:05:53]  *** Error codes and diagnostics ***
[2025-11-27 08:05:53]     "exeErrorCode": 0,
[2025-11-27 08:05:53]     "exeErrorDiag": "",
[2025-11-27 08:05:53]     "pilotErrorCode": 0,
[2025-11-27 08:05:53]     "pilotErrorDiag": "",
[2025-11-27 08:05:53]  *** Listing of results directory ***
[2025-11-27 08:05:53] total 1312908
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas      5112 Nov 19 02:27 queuedata.json
[2025-11-27 08:05:53] -rwx------. 1 boincer umatlas     36292 Nov 19 02:27 runpilot2-wrapper.sh
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas    576529 Nov 19 02:27 pilot3.tar.gz
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:05:53] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:45 run_atlas
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:45 job.xml
[2025-11-27 08:05:53] -rw-r--r--. 2 boincer umatlas 411934408 Nov 26 16:45 EVNT.47493027._000181.pool.root.1
[2025-11-27 08:05:53] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 16:45 start_atlas.sh
[2025-11-27 08:05:53] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:45 shared
[2025-11-27 08:05:53] -rw-r--r--. 2 boincer umatlas    590085 Nov 26 16:45 input.tar.gz
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:45 boinc_lockfile
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 16:45 pandaJob.out
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas    991538 Nov 26 16:46 agis_schedconf.cvmfs.json
[2025-11-27 08:05:53] drwx------. 5 boincer umatlas      4096 Nov 26 16:46 pilot3
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas       532 Nov 27 07:56 boinc_task_state.xml
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 08:01 init_data.xml
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas 910256349 Nov 27 08:04 HITS.47493029._001762.pool.root.1
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas      1069 Nov 27 08:04 memory_monitor_summary.json
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas   1516240 Nov 27 08:04 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas   2069528 Nov 27 08:04 log.47493029._001762.job.log.tgz.1
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas      8625 Nov 27 08:05 heartbeat.json
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas        95 Nov 27 08:05 pilot_heartbeat.json
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas        29 Nov 27 08:05 wrapper_checkpoint.txt
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 08:05 boinc_mmap_file
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas      5010 Nov 27 08:05 pilotlog.txt
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas   7083573 Nov 27 08:05 log.47493029._001762.job.log.1
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas       353 Nov 27 08:05 output.list
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas       620 Nov 27 08:05 runtime_log
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas   9175040 Nov 27 08:05 result.tar.gz
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas      8699 Nov 27 08:05 runtime_log.err
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas       663 Nov 27 08:05 3VBLDmhmrf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvpGKDmZtelwm.diag
[2025-11-27 08:05:53] -rw-r--r--. 1 boincer umatlas     21361 Nov 27 08:05 stderr.txt
[2025-11-27 08:05:53] HITS file was successfully produced:
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas 910256349 Nov 27 08:04 shared/HITS.pool.root.1
[2025-11-27 08:05:53]  *** Contents of shared directory: ***
[2025-11-27 08:05:53] total 1300768
[2025-11-27 08:05:53] -rw-r--r--. 2 boincer umatlas 411934408 Nov 26 16:45 ATLAS.root_0
[2025-11-27 08:05:53] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 16:45 start_atlas.sh
[2025-11-27 08:05:53] -rw-r--r--. 2 boincer umatlas    590085 Nov 26 16:45 input.tar.gz
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas 910256349 Nov 27 08:04 HITS.pool.root.1
[2025-11-27 08:05:53] -rw-------. 1 boincer umatlas   9175040 Nov 27 08:05 result.tar.gz
08:05:55 (2869215): run_atlas exited; CPU time 207550.622182
08:05:55 (2869215): called boinc_finish(0)

</stderr_txt>
]]>

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