Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:21:31 (1583389): wrapper (7.7.26015): starting
16:21:31 (1583389): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:21:31] Arguments: --nthreads 8
[2025-11-26 16:21:31] Threads: 8
[2025-11-26 16:21:31] Checking for CVMFS
[2025-11-26 16:21:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:21:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:21:32] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:21:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:21:32] 2.13.3.0 17216 30448 458916 153335 0 407 20004684 32935936 68434 16776704 0 538169576 99.679 425027566 48107 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:21:32] CVMFS is ok
[2025-11-26 16:21:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:21:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:21:33] Further information can be found at the LHC@home message board.
[2025-11-26 16:21:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:21:33] Checking for apptainer binary...
[2025-11-26 16:21:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:21:33] Running /usr/bin/apptainer --version
[2025-11-26 16:21:33] apptainer version 1.4.4-1.el9
[2025-11-26 16:21:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:21:33] c7-9-14.aglt2.org
[2025-11-26 16:21:33] apptainer works
[2025-11-26 16:21:33] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:21:33] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:21:33] Starting ATLAS job with PandaID=6896296927
[2025-11-26 16:21:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:00:19]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:00:19] 2025-11-27 03:59:29,106 | INFO     | sum of square deviations: 18113584269.492287
[2025-11-26 23:00:19] 2025-11-27 03:59:29,109 | INFO     | sum of deviations: 374966603833.6602
[2025-11-26 23:00:19] 2025-11-27 03:59:29,109 | INFO     | mean x: 1764204073.7242267
[2025-11-26 23:00:19] 2025-11-27 03:59:29,109 | INFO     | mean y: 2821950.8659793814
[2025-11-26 23:00:19] 2025-11-27 03:59:29,109 | INFO     | intersect: -36517703205.93798
[2025-11-26 23:00:19] 2025-11-27 03:59:29,109 | INFO     | chi2: 11.812480118608578
[2025-11-26 23:00:19] 2025-11-27 03:59:29,110 | INFO     | sum of square deviations: 17422497571.90083
[2025-11-26 23:00:19] 2025-11-27 03:59:29,112 | INFO     | sum of deviations: 509196514203.9767
[2025-11-26 23:00:19] 2025-11-27 03:59:29,112 | INFO     | mean x: 1764203921.2402089
[2025-11-26 23:00:19] 2025-11-27 03:59:29,112 | INFO     | mean y: 2851579.7937336816
[2025-11-26 23:00:19] 2025-11-27 03:59:29,112 | INFO     | intersect: -51558440556.03247
[2025-11-26 23:00:19] 2025-11-27 03:59:29,112 | INFO     | chi2: 8.47145919512825
[2025-11-26 23:00:19] 2025-11-27 03:59:29,112 | INFO     | current chi2=8.47145919512825 (change=28.283822617547607 %)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,112 | INFO     | sum of square deviations: 16749155321.124361
[2025-11-26 23:00:19] 2025-11-27 03:59:29,114 | INFO     | sum of deviations: 533131126285.1377
[2025-11-26 23:00:19] 2025-11-27 03:59:29,115 | INFO     | mean x: 1764203768.7486773
[2025-11-26 23:00:19] 2025-11-27 03:59:29,115 | INFO     | mean y: 2856955.275132275
[2025-11-26 23:00:19] 2025-11-27 03:59:29,115 | INFO     | intersect: -56152329631.550804
[2025-11-26 23:00:19] 2025-11-27 03:59:29,115 | INFO     | chi2: 8.155890972635747
[2025-11-26 23:00:19] 2025-11-27 03:59:29,115 | INFO     | current chi2=8.155890972635747 (change=3.7250751638393034 %)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,115 | INFO     | right removable region: 377
[2025-11-26 23:00:19] 2025-11-27 03:59:29,116 | INFO     | sum of square deviations: 17422207821.900818
[2025-11-26 23:00:19] 2025-11-27 03:59:29,118 | INFO     | sum of deviations: 226484942738.18298
[2025-11-26 23:00:19] 2025-11-27 03:59:29,118 | INFO     | mean x: 1764204226.2402089
[2025-11-26 23:00:19] 2025-11-27 03:59:29,118 | INFO     | mean y: 2854684.7154046996
[2025-11-26 23:00:19] 2025-11-27 03:59:29,118 | INFO     | intersect: -22931419618.693764
[2025-11-26 23:00:19] 2025-11-27 03:59:29,118 | INFO     | chi2: 7.603302428918557
[2025-11-26 23:00:19] 2025-11-27 03:59:29,118 | INFO     | current chi2=7.603302428918557 (change=35.633310256828864 %)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,118 | INFO     | sum of square deviations: 16748645661.60835
[2025-11-26 23:00:19] 2025-11-27 03:59:29,120 | INFO     | sum of deviations: 87969694032.14297
[2025-11-26 23:00:19] 2025-11-27 03:59:29,121 | INFO     | mean x: 1764204378.7566137
[2025-11-26 23:00:19] 2025-11-27 03:59:29,121 | INFO     | mean y: 2886028.6428571427
[2025-11-26 23:00:19] 2025-11-27 03:59:29,121 | INFO     | intersect: -9263327045.834644
[2025-11-26 23:00:19] 2025-11-27 03:59:29,121 | INFO     | chi2: 4.164431171192205
[2025-11-26 23:00:19] 2025-11-27 03:59:29,121 | INFO     | current chi2=4.164431171192205 (change=45.22865281074285 %)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,121 | INFO     | sum of square deviations: 16092665226.10723
[2025-11-26 23:00:19] 2025-11-27 03:59:29,123 | INFO     | sum of deviations: 53662412446.814964
[2025-11-26 23:00:19] 2025-11-27 03:59:29,123 | INFO     | mean x: 1764204531.2734585
[2025-11-26 23:00:19] 2025-11-27 03:59:29,123 | INFO     | mean y: 2893970.678284182
[2025-11-26 23:00:19] 2025-11-27 03:59:29,123 | INFO     | intersect: -5880001737.867873
[2025-11-26 23:00:19] 2025-11-27 03:59:29,124 | INFO     | chi2: 3.8993991344711527
[2025-11-26 23:00:19] 2025-11-27 03:59:29,124 | INFO     | current chi2=3.8993991344711527 (change=6.3641833860632175 %)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,124 | INFO     | left removable region: 30
[2025-11-26 23:00:19] 2025-11-27 03:59:29,124 | INFO     | sum of square deviations: 12956582357.106731
[2025-11-26 23:00:19] 2025-11-27 03:59:29,126 | INFO     | sum of deviations: 178632923830.48126
[2025-11-26 23:00:19] 2025-11-27 03:59:29,126 | INFO     | mean x: 1764204653.351585
[2025-11-26 23:00:19] 2025-11-27 03:59:29,126 | INFO     | mean y: 2940949.3976945244
[2025-11-26 23:00:19] 2025-11-27 03:59:29,126 | INFO     | intersect: -24320219802.224133
[2025-11-26 23:00:19] 2025-11-27 03:59:29,126 | INFO     | chi2: 0.015607880523063887
[2025-11-26 23:00:19] 2025-11-27 03:59:29,126 | INFO     | current memory leak: 13.79 B/s (using 347 data points, chi2=0.02)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | could have reported an average CPU frequency of 3800 MHz (16 samples)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | ..............................
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | . Timing measurements:
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | . get job = 0 s
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | . initial setup = 3 s
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | . payload setup = 32 s
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | . stage-in = 0 s
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | . payload execution = 23691 s
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | . stage-out = 4 s
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | . log creation = 1 s
[2025-11-26 23:00:19] 2025-11-27 03:59:29,127 | INFO     | ..............................
[2025-11-26 23:00:19] 2025-11-27 03:59:29,259 | INFO     | 
[2025-11-26 23:00:19] 2025-11-27 03:59:29,259 | INFO     | job summary report
[2025-11-26 23:00:19] 2025-11-27 03:59:29,259 | INFO     | --------------------------------------------------
[2025-11-26 23:00:19] 2025-11-27 03:59:29,259 | INFO     | PanDA job id: 6896296927
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | task id: 47556161
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | errors: (none)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | pilot state: finished 
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | transexitcode: 0
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | exeerrorcode: 0
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | exeerrordiag: 
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | exitcode: 0
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | exitmsg: OK
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | cpuconsumptiontime: 132994 s
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | nevents: 1000
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | neventsw: 0
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | pid: 1651903
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | pgrp: 1651903
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | corecount: 8
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | event service: False
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | sizes: {0: 2284141, 1: 2284340, 11: 2284340, 22: 2284368, 27: 2284658, 33: 2284686, 23728: 2320775, 23734: 2329825, 23762: 2330015}
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | --------------------------------------------------
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | 
[2025-11-26 23:00:19] 2025-11-27 03:59:29,260 | INFO     | executing command: ls -lF /tmp/boinchome/slots/7
[2025-11-26 23:00:19] 2025-11-27 03:59:29,293 | INFO     | time since job start (23818s) is within the limit (172800.0s)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,335 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:00:19] 2025-11-27 03:59:29,336 | INFO     | job 6896296927 has completed (purged errors)
[2025-11-26 23:00:19] 2025-11-27 03:59:29,337 | INFO     | overall cleanup function is called
[2025-11-26 23:00:19] 2025-11-27 03:59:30,370 | INFO     | --- collectZombieJob: --- 10, [1651903]
[2025-11-26 23:00:19] 2025-11-27 03:59:30,370 | INFO     | zombie collector waiting for pid 1651903
[2025-11-26 23:00:19] 2025-11-27 03:59:30,371 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:00:19] 2025-11-27 03:59:30,371 | INFO     | collected zombie processes
[2025-11-26 23:00:19] 2025-11-27 03:59:30,371 | INFO     | will attempt to kill all subprocesses of pid=1651903
[2025-11-26 23:00:19] 2025-11-27 03:59:31,575 | INFO     | process IDs to be killed: [1651903] (in reverse order)
[2025-11-26 23:00:19] 2025-11-27 03:59:31,884 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:00:19] 2025-11-27 03:59:31,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:00:19] 2025-11-27 03:59:31,937 | INFO     | did not find any defunct processes belonging to 1651903
[2025-11-26 23:00:19] 2025-11-27 03:59:32,009 | INFO     | did not find any defunct processes belonging to 1651903
[2025-11-26 23:00:19] 2025-11-27 03:59:32,017 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:00:19] 2025-11-27 03:59:32,017 | INFO     | ready for new job
[2025-11-26 23:00:19] 2025-11-27 03:59:32,017 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:00:19] 2025-11-27 03:59:32,019 | INFO     | ***************************************
[2025-11-26 23:00:19] 2025-11-27 03:59:32,019 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:00:19] 2025-11-27 03:59:32,019 | INFO     | ***************************************
[2025-11-26 23:00:19] 2025-11-27 03:59:32,019 | INFO     | 
[2025-11-26 23:00:19] 2025-11-27 03:59:32,028 | INFO     | architecture information:
[2025-11-26 23:00:19] 2025-11-27 03:59:32,028 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:00:19] 2025-11-27 03:59:32,068 | INFO     | cat /etc/os-release:
[2025-11-26 23:00:19] NAME="CentOS Linux"
[2025-11-26 23:00:19] VERSION="7 (Core)"
[2025-11-26 23:00:19] ID="centos"
[2025-11-26 23:00:19] ID_LIKE="rhel fedora"
[2025-11-26 23:00:19] VERSION_ID="7"
[2025-11-26 23:00:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:00:19] ANSI_COLOR="0;31"
[2025-11-26 23:00:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:00:19] HOME_URL="https://www.centos.org/"
[2025-11-26 23:00:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:00:19] 
[2025-11-26 23:00:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:00:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:00:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:00:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:00:19] 
[2025-11-26 23:00:19] 2025-11-27 03:59:32,068 | INFO     | ***************************************
[2025-11-26 23:00:19] 2025-11-27 03:59:32,571 | INFO     | executing command: df -mP /tmp/boinchome/slots/7
[2025-11-26 23:00:19] 2025-11-27 03:59:32,622 | INFO     | sufficient remaining disk space (61098426368 B)
[2025-11-26 23:00:19] 2025-11-27 03:59:32,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:00:19] 2025-11-27 03:59:32,622 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:00:19] 2025-11-27 03:59:32,622 | INFO     | update_server=False
[2025-11-26 23:00:19] 2025-11-27 03:59:32,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:00:19] 2025-11-27 03:59:32,642 | INFO     | all data control threads have been joined
[2025-11-26 23:00:19] 2025-11-27 03:59:32,697 | INFO     | all payload control threads have been joined
[2025-11-26 23:00:19] 2025-11-27 03:59:32,915 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 23:00:19] 2025-11-27 03:59:32,916 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 23:00:19] 2025-11-27 03:59:32,916 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:00:19] 2025-11-27 03:59:32,916 | INFO     | will abort loop
[2025-11-26 23:00:19] 2025-11-27 03:59:33,628 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:33,648 | INFO     | [data] control thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:33,702 | INFO     | [payload] control thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:33,827 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:00:19] 2025-11-27 03:59:33,924 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:33,935 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:34,092 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:34,140 | INFO     | all job control threads have been joined
[2025-11-26 23:00:19] 2025-11-27 03:59:34,264 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:00:19] 2025-11-27 03:59:34,279 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:34,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:00:19] 2025-11-27 03:59:34,533 | INFO     | [job] validate thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:34,771 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:35,006 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:35,009 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:35,142 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:35,146 | INFO     | [job] control thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:35,292 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:35,834 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:00:19] 2025-11-27 03:59:38,273 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:00:19] 2025-11-27 04:00:03,460 | INFO     | PID=1599886 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:00:19] 2025-11-27 04:00:03,460 | INFO     | .. there are 105 such processes running
[2025-11-26 23:00:19] 2025-11-27 04:00:03,460 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:00:19] 2025-11-27 04:00:03,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:00:19] 2025-11-27 04:00:03,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:00:19] 2025-11-27 04:00:11,721 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:00:19] 2025-11-27 04:00:12,990 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140316450408256)>', '<ExcThread(monitor, started 140315944007424)>']
[2025-11-26 23:00:19] 2025-11-27 04:00:13,560 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:00:19] 2025-11-27 04:00:13,560 | INFO     | [monitor] control thread has ended
[2025-11-26 23:00:19] 2025-11-27 04:00:18,016 | INFO     | all workflow threads have been joined
[2025-11-26 23:00:19] 2025-11-27 04:00:18,016 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:00:19] 2025-11-27 04:00:18,017 | INFO     | traces error code: 0
[2025-11-26 23:00:19] 2025-11-27 04:00:18,017 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:00:19] 2025-11-27 04:00:18,290 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:00:19] 2025-11-27 04:00:18,312 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:00:19] 2025-11-27 04:00:18,327 [wrapper] pilotpid: 1599886
[2025-11-26 23:00:19] 2025-11-27 04:00:18,344 [wrapper] Pilot exit status: 0
[2025-11-26 23:00:19] 2025-11-27 04:00:18,371 [wrapper] pandaids: 6896296927
[2025-11-26 23:00:19] 2025-11-27 04:00:18,567 [wrapper] cleanup supervisor_pilot 2008602 1599887
[2025-11-26 23:00:19] 2025-11-27 04:00:18,570 [wrapper] Test setup, not cleaning
[2025-11-26 23:00:19] 2025-11-27 04:00:18,572 [wrapper] apfmon messages muted
[2025-11-26 23:00:19] 2025-11-27 04:00:18,575 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:00:19] 2025-11-27 04:00:18,578 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:00:19]  *** Error codes and diagnostics ***
[2025-11-26 23:00:19]     "exeErrorCode": 0,
[2025-11-26 23:00:19]     "exeErrorDiag": "",
[2025-11-26 23:00:19]     "pilotErrorCode": 0,
[2025-11-26 23:00:19]     "pilotErrorDiag": "",
[2025-11-26 23:00:19]  *** Listing of results directory ***
[2025-11-26 23:00:19] total 1315920
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas    576529 Nov 24 19:10 pilot3.tar.gz
[2025-11-26 23:00:19] -rwx------. 1 boincer umatlas     36292 Nov 24 19:40 runpilot2-wrapper.sh
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 19:41 queuedata.json
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:00:19] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:21 run_atlas
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:21 job.xml
[2025-11-26 23:00:19] -rw-r--r--. 2 boincer umatlas 409090692 Nov 26 16:21 EVNT.47483658._002071.pool.root.1
[2025-11-26 23:00:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:21 start_atlas.sh
[2025-11-26 23:00:19] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:21 shared
[2025-11-26 23:00:19] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 16:21 input.tar.gz
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:21 boinc_lockfile
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 16:21 pandaJob.out
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas        57 Nov 26 16:21 setup.sh.local
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas    991538 Nov 26 16:22 agis_schedconf.cvmfs.json
[2025-11-26 23:00:19] drwx------. 5 boincer umatlas      4096 Nov 26 16:22 pilot3
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:49 boinc_task_state.xml
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas      7171 Nov 26 22:55 init_data.xml
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas 924925307 Nov 26 22:58 HITS.47556161._000550.pool.root.1
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas      1052 Nov 26 22:58 memory_monitor_summary.json
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:58 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas   1672314 Nov 26 22:58 log.47556161._000550.job.log.tgz.1
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas      8580 Nov 26 22:59 heartbeat.json
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas        95 Nov 26 23:00 pilot_heartbeat.json
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas        29 Nov 26 23:00 wrapper_checkpoint.txt
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:00 boinc_mmap_file
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas      5011 Nov 26 23:00 pilotlog.txt
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas   3107729 Nov 26 23:00 log.47556161._000550.job.log.1
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas       353 Nov 26 23:00 output.list
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:00 runtime_log
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas   4802560 Nov 26 23:00 result.tar.gz
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 23:00 runtime_log.err
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas       658 Nov 26 23:00 d2xLDm6Hwh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmz0LKDmie49tn.diag
[2025-11-26 23:00:19] -rw-r--r--. 1 boincer umatlas     21209 Nov 26 23:00 stderr.txt
[2025-11-26 23:00:19] HITS file was successfully produced:
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas 924925307 Nov 26 22:58 shared/HITS.pool.root.1
[2025-11-26 23:00:19]  *** Contents of shared directory: ***
[2025-11-26 23:00:19] total 1308048
[2025-11-26 23:00:19] -rw-r--r--. 2 boincer umatlas 409090692 Nov 26 16:21 ATLAS.root_0
[2025-11-26 23:00:19] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:21 start_atlas.sh
[2025-11-26 23:00:19] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 16:21 input.tar.gz
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas 924925307 Nov 26 22:58 HITS.pool.root.1
[2025-11-26 23:00:19] -rw-------. 1 boincer umatlas   4802560 Nov 26 23:00 result.tar.gz
23:00:21 (1583389): run_atlas exited; CPU time 133510.533187
23:00:21 (1583389): called boinc_finish(0)

</stderr_txt>
]]>

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