Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:41:58 (28903): wrapper (7.7.26015): starting
01:41:58 (28903): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:41:58] Arguments: --nthreads 8
[2025-11-27 01:41:58] Threads: 8
[2025-11-27 01:41:58] Checking for CVMFS
[2025-11-27 01:41:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:41:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:41:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:41:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:41:58] 2.11.0.0 4351 66547 113508 153341 0 18 2705251 4096000 917 130560 2 4002832 99.294 4945671 545 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-11-27 01:41:58] CVMFS is ok
[2025-11-27 01:41:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:41:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:41:58] Further information can be found at the LHC@home message board.
[2025-11-27 01:41:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:41:58] Checking for apptainer binary...
[2025-11-27 01:41:58] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-11-27 01:41:58] apptainer is not installed, using version from CVMFS
[2025-11-27 01:41:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:41:58] WARNING: Environment variable TMPDIR already has value [/tmp/job_10928169/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node096
[2025-11-27 01:41:58] apptainer works
[2025-11-27 01:41:58] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:41:58] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:41:58] Starting ATLAS job with PandaID=6896296926
[2025-11-27 01:41:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10928169/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:09:35]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:09:35] 2025-11-27 05:09:04,123 | INFO     | executing command: lscpu
[2025-11-27 06:09:35] 2025-11-27 05:09:04,155 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 06:09:35] 2025-11-27 05:09:05,933 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 06:09:35] 2025-11-27 05:09:05,938 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2521.4928281250004
[2025-11-27 06:09:35] 2025-11-27 05:09:05,943 | INFO     | using path: /tmp/job_10928169/atlas/pilot/slots/0/PanDA_Pilot-6896296926/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:09:35] 2025-11-27 05:09:05,943 | INFO     | extracted standard info from prmon json
[2025-11-27 06:09:35] 2025-11-27 05:09:05,943 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:09:35] 2025-11-27 05:09:05,943 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:09:35] 2025-11-27 05:09:05,946 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:09:35] 2025-11-27 05:09:05,946 | INFO     | sum of square deviations: 5576683165.5
[2025-11-27 06:09:35] 2025-11-27 05:09:05,947 | INFO     | sum of deviations: 794807440613.9985
[2025-11-27 06:09:35] 2025-11-27 05:09:05,947 | INFO     | mean x: 1764212137.5
[2025-11-27 06:09:35] 2025-11-27 05:09:05,947 | INFO     | mean y: 3443543.679389313
[2025-11-27 06:09:35] 2025-11-27 05:09:05,947 | INFO     | intersect: -251437940535.88507
[2025-11-27 06:09:35] 2025-11-27 05:09:05,947 | INFO     | chi2: 5.7284310099983795
[2025-11-27 06:09:35] 2025-11-27 05:09:05,947 | INFO     | sum of square deviations: 5263458688.0
[2025-11-27 06:09:35] 2025-11-27 05:09:05,948 | INFO     | sum of deviations: 834093591778.9998
[2025-11-27 06:09:35] 2025-11-27 05:09:05,948 | INFO     | mean x: 1764211985.0
[2025-11-27 06:09:35] 2025-11-27 05:09:05,948 | INFO     | mean y: 3462343.4980544746
[2025-11-27 06:09:35] 2025-11-27 05:09:05,948 | INFO     | intersect: -279568963024.4597
[2025-11-27 06:09:35] 2025-11-27 05:09:05,949 | INFO     | chi2: 4.056013191053821
[2025-11-27 06:09:35] 2025-11-27 05:09:05,949 | INFO     | current chi2=4.056013191053821 (change=29.195041644483936 %)
[2025-11-27 06:09:35] 2025-11-27 05:09:05,949 | INFO     | sum of square deviations: 4962187923.0
[2025-11-27 06:09:35] 2025-11-27 05:09:05,950 | INFO     | sum of deviations: 788784323611.0
[2025-11-27 06:09:35] 2025-11-27 05:09:05,950 | INFO     | mean x: 1764211832.5
[2025-11-27 06:09:35] 2025-11-27 05:09:05,950 | INFO     | mean y: 3439405.9285714286
[2025-11-27 06:09:35] 2025-11-27 05:09:05,950 | INFO     | intersect: -280433871433.3037
[2025-11-27 06:09:35] 2025-11-27 05:09:05,950 | INFO     | chi2: 4.060276740662484
[2025-11-27 06:09:35] 2025-11-27 05:09:05,950 | INFO     | current chi2=4.060276740662484 (change=-0.1051167589412014 %)
[2025-11-27 06:09:35] 2025-11-27 05:09:05,950 | INFO     | right removable region: 251
[2025-11-27 06:09:35] 2025-11-27 05:09:05,950 | INFO     | sum of square deviations: 5263458688.0
[2025-11-27 06:09:35] 2025-11-27 05:09:05,951 | INFO     | sum of deviations: 676269644820.0002
[2025-11-27 06:09:35] 2025-11-27 05:09:05,951 | INFO     | mean x: 1764212290.0
[2025-11-27 06:09:35] 2025-11-27 05:09:05,951 | INFO     | mean y: 3501188.241245136
[2025-11-27 06:09:35] 2025-11-27 05:09:05,951 | INFO     | intersect: -226669355856.39624
[2025-11-27 06:09:35] 2025-11-27 05:09:05,951 | INFO     | chi2: 2.3270014638682914
[2025-11-27 06:09:35] 2025-11-27 05:09:05,952 | INFO     | current chi2=2.3270014638682914 (change=59.37803109076896 %)
[2025-11-27 06:09:35] 2025-11-27 05:09:05,952 | INFO     | sum of square deviations: 4962187923.0
[2025-11-27 06:09:35] 2025-11-27 05:09:05,953 | INFO     | sum of deviations: 627010946230.9999
[2025-11-27 06:09:35] 2025-11-27 05:09:05,953 | INFO     | mean x: 1764212442.5
[2025-11-27 06:09:35] 2025-11-27 05:09:05,953 | INFO     | mean y: 3526042.0793650793
[2025-11-27 06:09:35] 2025-11-27 05:09:05,953 | INFO     | intersect: -222918404785.4945
[2025-11-27 06:09:35] 2025-11-27 05:09:05,953 | INFO     | chi2: 2.107181745723432
[2025-11-27 06:09:35] 2025-11-27 05:09:05,953 | INFO     | current chi2=2.107181745723432 (change=9.446479581471426 %)
[2025-11-27 06:09:35] 2025-11-27 05:09:05,953 | INFO     | left removable region: 20
[2025-11-27 06:09:35] 2025-11-27 05:09:05,953 | INFO     | sum of square deviations: 3822136780.0
[2025-11-27 06:09:35] 2025-11-27 05:09:05,954 | INFO     | sum of deviations: 557817005087.0
[2025-11-27 06:09:35] 2025-11-27 05:09:05,954 | INFO     | mean x: 1764212412.0
[2025-11-27 06:09:35] 2025-11-27 05:09:05,954 | INFO     | mean y: 3556998.8571428573
[2025-11-27 06:09:35] 2025-11-27 05:09:05,954 | INFO     | intersect: -257472232237.3283
[2025-11-27 06:09:35] 2025-11-27 05:09:05,954 | INFO     | chi2: 0.2951828420836146
[2025-11-27 06:09:35] 2025-11-27 05:09:05,954 | INFO     | current memory leak: 145.94 B/s (using 231 data points, chi2=0.30)
[2025-11-27 06:09:35] 2025-11-27 05:09:05,954 | INFO     | could have reported an average CPU frequency of 2751 MHz (12 samples)
[2025-11-27 06:09:35] 2025-11-27 05:09:05,954 | INFO     | ..............................
[2025-11-27 06:09:35] 2025-11-27 05:09:05,954 | INFO     | . Timing measurements:
[2025-11-27 06:09:35] 2025-11-27 05:09:05,955 | INFO     | . get job = 0 s
[2025-11-27 06:09:35] 2025-11-27 05:09:05,955 | INFO     | . initial setup = 1 s
[2025-11-27 06:09:35] 2025-11-27 05:09:05,955 | INFO     | . payload setup = 38 s
[2025-11-27 06:09:35] 2025-11-27 05:09:05,955 | INFO     | . stage-in = 0 s
[2025-11-27 06:09:35] 2025-11-27 05:09:05,955 | INFO     | . payload execution = 15961 s
[2025-11-27 06:09:35] 2025-11-27 05:09:05,955 | INFO     | . stage-out = 1 s
[2025-11-27 06:09:35] 2025-11-27 05:09:05,955 | INFO     | . log creation = 0 s
[2025-11-27 06:09:35] 2025-11-27 05:09:05,955 | INFO     | ..............................
[2025-11-27 06:09:35] 2025-11-27 05:09:06,098 | INFO     | time since job start (16023s) is within the limit (172800.0s)
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | 
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | job summary report
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | --------------------------------------------------
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | PanDA job id: 6896296926
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | task id: 47556161
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | errors: (none)
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | pilot state: finished 
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | transexitcode: 0
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | exeerrorcode: 0
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | exeerrordiag: 
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | exitcode: 0
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | exitmsg: OK
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | cpuconsumptiontime: 120143 s
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | nevents: 1000
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | neventsw: 0
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | pid: 23074
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | pgrp: 23074
[2025-11-27 06:09:35] 2025-11-27 05:09:06,126 | INFO     | corecount: 8
[2025-11-27 06:09:35] 2025-11-27 05:09:06,127 | INFO     | event service: False
[2025-11-27 06:09:35] 2025-11-27 05:09:06,127 | INFO     | sizes: {0: 2284156, 1: 2284466, 2: 2284728, 11: 2284756, 16003: 2316908, 16005: 2325932, 16006: 2326116, 16010: 2326362}
[2025-11-27 06:09:35] 2025-11-27 05:09:06,127 | INFO     | --------------------------------------------------
[2025-11-27 06:09:35] 2025-11-27 05:09:06,127 | INFO     | 
[2025-11-27 06:09:35] 2025-11-27 05:09:06,127 | INFO     | executing command: ls -lF /tmp/job_10928169/atlas/pilot/slots/0
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | job 6896296926 has completed (purged errors)
[2025-11-27 06:09:35] 2025-11-27 05:09:06,136 | INFO     | overall cleanup function is called
[2025-11-27 06:09:35] 2025-11-27 05:09:07,144 | INFO     | --- collectZombieJob: --- 10, [23074]
[2025-11-27 06:09:35] 2025-11-27 05:09:07,144 | INFO     | zombie collector waiting for pid 23074
[2025-11-27 06:09:35] 2025-11-27 05:09:07,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:09:35] 2025-11-27 05:09:07,144 | INFO     | collected zombie processes
[2025-11-27 06:09:35] 2025-11-27 05:09:07,144 | INFO     | will attempt to kill all subprocesses of pid=23074
[2025-11-27 06:09:35] 2025-11-27 05:09:07,247 | INFO     | process IDs to be killed: [23074] (in reverse order)
[2025-11-27 06:09:35] 2025-11-27 05:09:07,286 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:09:35] 2025-11-27 05:09:07,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:09:35] 2025-11-27 05:09:07,290 | INFO     | did not find any defunct processes belonging to 23074
[2025-11-27 06:09:35] 2025-11-27 05:09:07,293 | INFO     | did not find any defunct processes belonging to 23074
[2025-11-27 06:09:35] 2025-11-27 05:09:07,294 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:09:35] 2025-11-27 05:09:07,294 | INFO     | ready for new job
[2025-11-27 06:09:35] 2025-11-27 05:09:07,294 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:09:35] 2025-11-27 05:09:07,295 | INFO     | ***************************************
[2025-11-27 06:09:35] 2025-11-27 05:09:07,295 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:09:35] 2025-11-27 05:09:07,295 | INFO     | ***************************************
[2025-11-27 06:09:35] 2025-11-27 05:09:07,295 | INFO     | 
[2025-11-27 06:09:35] 2025-11-27 05:09:07,309 | INFO     | architecture information:
[2025-11-27 06:09:35] 2025-11-27 05:09:07,309 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:09:35] 2025-11-27 05:09:07,315 | INFO     | cat /etc/os-release:
[2025-11-27 06:09:35] NAME="CentOS Linux"
[2025-11-27 06:09:35] VERSION="7 (Core)"
[2025-11-27 06:09:35] ID="centos"
[2025-11-27 06:09:35] ID_LIKE="rhel fedora"
[2025-11-27 06:09:35] VERSION_ID="7"
[2025-11-27 06:09:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:09:35] ANSI_COLOR="0;31"
[2025-11-27 06:09:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:09:35] HOME_URL="https://www.centos.org/"
[2025-11-27 06:09:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:09:35] 
[2025-11-27 06:09:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:09:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:09:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:09:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:09:35] 
[2025-11-27 06:09:35] 2025-11-27 05:09:07,315 | INFO     | ***************************************
[2025-11-27 06:09:35] 2025-11-27 05:09:07,818 | INFO     | executing command: df -mP /tmp/job_10928169/atlas/pilot/slots/0
[2025-11-27 06:09:35] 2025-11-27 05:09:07,825 | INFO     | sufficient remaining disk space (221510631424 B)
[2025-11-27 06:09:35] 2025-11-27 05:09:07,825 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:09:35] 2025-11-27 05:09:07,825 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:09:35] 2025-11-27 05:09:07,825 | INFO     | update_server=False
[2025-11-27 06:09:35] 2025-11-27 05:09:07,825 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:09:35] 2025-11-27 05:09:07,825 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:09:35] 2025-11-27 05:09:07,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:09:35] 2025-11-27 05:09:07,825 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:09:35] 2025-11-27 05:09:07,825 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 06:09:35] 2025-11-27 05:09:07,826 | INFO     | aborting loop
[2025-11-27 06:09:35] 2025-11-27 05:09:07,826 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:09:35] 2025-11-27 05:09:07,826 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:09:35] 2025-11-27 05:09:07,826 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:09:35] 2025-11-27 05:09:08,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:09:35] 2025-11-27 05:09:08,285 | INFO     | all payload control threads have been joined
[2025-11-27 06:09:35] 2025-11-27 05:09:08,377 | INFO     | all data control threads have been joined
[2025-11-27 06:09:35] 2025-11-27 05:09:08,830 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:08,831 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:08,831 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:08,944 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:09,059 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:09,135 | INFO     | all job control threads have been joined
[2025-11-27 06:09:35] 2025-11-27 05:09:09,187 | INFO     | [job] validate thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:09,290 | INFO     | [payload] control thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:09,382 | INFO     | [data] control thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:09,427 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:09,455 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:09,595 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:09,831 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:10,065 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:10,140 | INFO     | [job] control thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:12,056 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:18,382 | INFO     | job.realtimelogging is not enabled
[2025-11-27 06:09:35] 2025-11-27 05:09:19,388 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:09:35] 2025-11-27 05:09:29,582 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:09:35] 2025-11-27 05:09:30,091 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456060819200)>']
[2025-11-27 06:09:35] 2025-11-27 05:09:30,939 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:09:35] 2025-11-27 05:09:30,939 | INFO     | [monitor] control thread has ended
[2025-11-27 06:09:35] 2025-11-27 05:09:35,116 | INFO     | all workflow threads have been joined
[2025-11-27 06:09:35] 2025-11-27 05:09:35,116 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:09:35] 2025-11-27 05:09:35,116 | INFO     | traces error code: 0
[2025-11-27 06:09:35] 2025-11-27 05:09:35,116 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:09:35] 2025-11-27 05:09:35,168 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:09:35] 2025-11-27 05:09:35,170 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:09:35] 2025-11-27 05:09:35,171 [wrapper] pilotpid: 569
[2025-11-27 06:09:35] 2025-11-27 05:09:35,172 [wrapper] Pilot exit status: 0
[2025-11-27 06:09:35] 2025-11-27 05:09:35,176 [wrapper] pandaids: 6896296926
[2025-11-27 06:09:35] 2025-11-27 05:09:35,201 [wrapper] cleanup supervisor_pilot  6768 570
[2025-11-27 06:09:35] 2025-11-27 05:09:35,202 [wrapper] Test setup, not cleaning
[2025-11-27 06:09:35] 2025-11-27 05:09:35,203 [wrapper] apfmon messages muted
[2025-11-27 06:09:35] 2025-11-27 05:09:35,205 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:09:35] 2025-11-27 05:09:35,206 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:09:35]  *** Error codes and diagnostics ***
[2025-11-27 06:09:35]     "exeErrorCode": 0,
[2025-11-27 06:09:35]     "exeErrorDiag": "",
[2025-11-27 06:09:35]     "pilotErrorCode": 0,
[2025-11-27 06:09:35]     "pilotErrorDiag": "",
[2025-11-27 06:09:35]  *** Listing of results directory ***
[2025-11-27 06:09:35] total 1303420
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user    576529 Nov 25 01:10 pilot3.tar.gz
[2025-11-27 06:09:35] -rwx------ 1 mf493845 unix-user     36292 Nov 25 01:40 runpilot2-wrapper.sh
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user      5112 Nov 25 01:41 queuedata.json
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user       100 Nov 26 23:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:09:35] -rwxr-xr-x 1 mf493845 unix-user      7986 Nov 26 23:57 run_atlas
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user       105 Nov 26 23:57 job.xml
[2025-11-27 06:09:35] -rw-r--r-- 2 mf493845 unix-user 409090692 Nov 27 01:41 EVNT.47483658._002071.pool.root.1
[2025-11-27 06:09:35] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 27 01:41 start_atlas.sh
[2025-11-27 06:09:35] drwxrwx--x 2 mf493845 unix-user       100 Nov 27 01:41 shared
[2025-11-27 06:09:35] -rw-r--r-- 2 mf493845 unix-user    590097 Nov 27 01:41 input.tar.gz
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user      6390 Nov 27 01:41 init_data.xml
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user         0 Nov 27 01:41 boinc_setup_complete
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user      8192 Nov 27 01:41 boinc_mmap_file
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user         0 Nov 27 01:41 boinc_lockfile
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user      2784 Nov 27 01:41 pandaJob.out
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user    991546 Nov 27 01:42 agis_schedconf.cvmfs.json
[2025-11-27 06:09:35] drwx------ 5 mf493845 unix-user       440 Nov 27 01:42 pilot3
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user 913978042 Nov 27 06:08 HITS.47556161._000549.pool.root.1
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user        95 Nov 27 06:08 pilot_heartbeat.json
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user      1025 Nov 27 06:08 memory_monitor_summary.json
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user   1516240 Nov 27 06:09 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user   1565330 Nov 27 06:09 log.47556161._000549.job.log.tgz.1
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user      8578 Nov 27 06:09 heartbeat.json
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user      4638 Nov 27 06:09 pilotlog.txt
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user   2305306 Nov 27 06:09 log.47556161._000549.job.log.1
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user       353 Nov 27 06:09 output.list
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user       620 Nov 27 06:09 runtime_log
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user   3891200 Nov 27 06:09 result.tar.gz
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user      9221 Nov 27 06:09 runtime_log.err
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user       650 Nov 27 06:09 8iwLDm6Hwh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmy0LKDmyZZBkm.diag
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user     21687 Nov 27 06:09 stderr.txt
[2025-11-27 06:09:35] HITS file was successfully produced:
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user 913978042 Nov 27 06:08 shared/HITS.pool.root.1
[2025-11-27 06:09:35]  *** Contents of shared directory: ***
[2025-11-27 06:09:35] total 1296460
[2025-11-27 06:09:35] -rw-r--r-- 2 mf493845 unix-user 409090692 Nov 27 01:41 ATLAS.root_0
[2025-11-27 06:09:35] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 27 01:41 start_atlas.sh
[2025-11-27 06:09:35] -rw-r--r-- 2 mf493845 unix-user    590097 Nov 27 01:41 input.tar.gz
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user 913978042 Nov 27 06:08 HITS.pool.root.1
[2025-11-27 06:09:35] -rw------- 1 mf493845 unix-user   3891200 Nov 27 06:09 result.tar.gz
06:09:37 (28903): run_atlas exited; CPU time 120320.397600
06:09:37 (28903): called boinc_finish(0)

</stderr_txt>
]]>

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