Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:47:56 (3617908): wrapper (7.7.26015): starting
16:47:56 (3617908): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:47:56] Arguments: --nthreads 8
[2025-11-26 16:47:56] Threads: 8
[2025-11-26 16:47:56] Checking for CVMFS
[2025-11-26 16:47:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:47:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:47:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:47:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:47:57] 2.13.3.0 12388 30563 245568 153335 1 777 29056171 32935937 36158 16776704 0 126453479 99.494 149766045 36225 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:47:57] CVMFS is ok
[2025-11-26 16:47:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:47:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:47:57] Further information can be found at the LHC@home message board.
[2025-11-26 16:47:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:47:57] Checking for apptainer binary...
[2025-11-26 16:47:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:47:57] Running /usr/bin/apptainer --version
[2025-11-26 16:47:57] apptainer version 1.4.4-1.el9
[2025-11-26 16:47:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:47:57] c7-4-31.aglt2.org
[2025-11-26 16:47:57] apptainer works
[2025-11-26 16:47:57] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:47:57] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:47:57] Starting ATLAS job with PandaID=6896297585
[2025-11-26 16:47:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:53:58]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:53:58] 2025-11-27 09:53:21,001 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:53:58] 2025-11-27 09:53:21,002 | INFO     | sum of square deviations: 112396990742.24963
[2025-11-27 04:53:58] 2025-11-27 09:53:21,053 | INFO     | sum of deviations: 451279714368.46063
[2025-11-27 04:53:58] 2025-11-27 09:53:21,053 | INFO     | mean x: 1764215445.4992988
[2025-11-27 04:53:58] 2025-11-27 09:53:21,053 | INFO     | mean y: 2870191.92286115
[2025-11-27 04:53:58] 2025-11-27 09:53:21,053 | INFO     | intersect: -7080545805.887108
[2025-11-27 04:53:58] 2025-11-27 09:53:21,054 | INFO     | chi2: 7.867007099229517
[2025-11-27 04:53:58] 2025-11-27 09:53:21,055 | INFO     | sum of square deviations: 110049092505.99538
[2025-11-27 04:53:58] 2025-11-27 09:53:21,189 | INFO     | sum of deviations: 703338531831.8722
[2025-11-27 04:53:58] 2025-11-27 09:53:21,189 | INFO     | mean x: 1764215293.0028248
[2025-11-27 04:53:58] 2025-11-27 09:53:21,189 | INFO     | mean y: 2886564.563559322
[2025-11-27 04:53:58] 2025-11-27 09:53:21,190 | INFO     | intersect: -11272450339.721619
[2025-11-27 04:53:58] 2025-11-27 09:53:21,190 | INFO     | chi2: 4.3570336429400935
[2025-11-27 04:53:58] 2025-11-27 09:53:21,212 | INFO     | current chi2=4.3570336429400935 (change=44.616375859546196 %)
[2025-11-27 04:53:58] 2025-11-27 09:53:21,213 | INFO     | sum of square deviations: 107734125119.71953
[2025-11-27 04:53:58] 2025-11-27 09:53:21,293 | INFO     | sum of deviations: 879244080851.942
[2025-11-27 04:53:58] 2025-11-27 09:53:21,294 | INFO     | mean x: 1764215140.506401
[2025-11-27 04:53:58] 2025-11-27 09:53:21,294 | INFO     | mean y: 2898132.9018492177
[2025-11-27 04:53:58] 2025-11-27 09:53:21,294 | INFO     | intersect: -14395285524.466572
[2025-11-27 04:53:58] 2025-11-27 09:53:21,303 | INFO     | chi2: 2.264794443775893
[2025-11-27 04:53:58] 2025-11-27 09:53:21,303 | INFO     | current chi2=2.264794443775893 (change=48.01980821411269 %)
[2025-11-27 04:53:58] 2025-11-27 09:53:21,303 | INFO     | sum of square deviations: 105451684240.98694
[2025-11-27 04:53:58] 2025-11-27 09:53:21,346 | INFO     | sum of deviations: 877537170019.2855
[2025-11-27 04:53:58] 2025-11-27 09:53:21,346 | INFO     | mean x: 1764214988.004298
[2025-11-27 04:53:58] 2025-11-27 09:53:21,347 | INFO     | mean y: 2898014.571633238
[2025-11-27 04:53:58] 2025-11-27 09:53:21,347 | INFO     | intersect: -14678367998.599916
[2025-11-27 04:53:58] 2025-11-27 09:53:21,370 | INFO     | chi2: 2.2294714215294027
[2025-11-27 04:53:58] 2025-11-27 09:53:21,371 | INFO     | current chi2=2.2294714215294027 (change=1.5596568749788808 %)
[2025-11-27 04:53:58] 2025-11-27 09:53:21,371 | INFO     | right removable region: 697
[2025-11-27 04:53:58] 2025-11-27 09:53:21,380 | INFO     | sum of square deviations: 110048875345.99522
[2025-11-27 04:53:58] 2025-11-27 09:53:21,436 | INFO     | sum of deviations: 278253006932.9712
[2025-11-27 04:53:58] 2025-11-27 09:53:21,436 | INFO     | mean x: 1764215598.0028248
[2025-11-27 04:53:58] 2025-11-27 09:53:21,436 | INFO     | mean y: 2881403.514124294
[2025-11-27 04:53:58] 2025-11-27 09:53:21,436 | INFO     | intersect: -4457848372.041916
[2025-11-27 04:53:58] 2025-11-27 09:53:21,437 | INFO     | chi2: 5.859053805482997
[2025-11-27 04:53:58] 2025-11-27 09:53:21,437 | INFO     | current chi2=5.859053805482997 (change=25.523725457717916 %)
[2025-11-27 04:53:58] 2025-11-27 09:53:21,458 | INFO     | sum of square deviations: 107733734109.73251
[2025-11-27 04:53:58] 2025-11-27 09:53:21,502 | INFO     | sum of deviations: 237057736955.44907
[2025-11-27 04:53:58] 2025-11-27 09:53:21,503 | INFO     | mean x: 1764215750.5049787
[2025-11-27 04:53:58] 2025-11-27 09:53:21,503 | INFO     | mean y: 2884115.3001422477
[2025-11-27 04:53:58] 2025-11-27 09:53:21,503 | INFO     | intersect: -3879103237.796606
[2025-11-27 04:53:58] 2025-11-27 09:53:21,504 | INFO     | chi2: 5.804731782764351
[2025-11-27 04:53:58] 2025-11-27 09:53:21,504 | INFO     | current chi2=5.804731782764351 (change=0.9271466779808403 %)
[2025-11-27 04:53:58] 2025-11-27 09:53:21,504 | INFO     | left removable region: 20
[2025-11-27 04:53:58] 2025-11-27 09:53:21,525 | INFO     | sum of square deviations: 96217067077.08705
[2025-11-27 04:53:58] 2025-11-27 09:53:21,555 | INFO     | sum of deviations: 607828337811.5128
[2025-11-27 04:53:58] 2025-11-27 09:53:21,555 | INFO     | mean x: 1764215567.5155096
[2025-11-27 04:53:58] 2025-11-27 09:53:21,555 | INFO     | mean y: 2916148.7607090105
[2025-11-27 04:53:58] 2025-11-27 09:53:21,555 | INFO     | intersect: -11142094279.430902
[2025-11-27 04:53:58] 2025-11-27 09:53:21,556 | INFO     | chi2: 0.10684531294569474
[2025-11-27 04:53:58] 2025-11-27 09:53:21,556 | INFO     | current memory leak: 6.32 B/s (using 677 data points, chi2=0.11)
[2025-11-27 04:53:58] 2025-11-27 09:53:21,570 | INFO     | could have reported an average CPU frequency of 3106 MHz (27 samples)
[2025-11-27 04:53:58] 2025-11-27 09:53:21,570 | INFO     | ..............................
[2025-11-27 04:53:58] 2025-11-27 09:53:21,570 | INFO     | . Timing measurements:
[2025-11-27 04:53:58] 2025-11-27 09:53:21,570 | INFO     | . get job = 0 s
[2025-11-27 04:53:58] 2025-11-27 09:53:21,570 | INFO     | . initial setup = 2 s
[2025-11-27 04:53:58] 2025-11-27 09:53:21,570 | INFO     | . payload setup = 11 s
[2025-11-27 04:53:58] 2025-11-27 09:53:21,570 | INFO     | . stage-in = 0 s
[2025-11-27 04:53:58] 2025-11-27 09:53:21,570 | INFO     | . payload execution = 43453 s
[2025-11-27 04:53:58] 2025-11-27 09:53:21,570 | INFO     | . stage-out = 5 s
[2025-11-27 04:53:58] 2025-11-27 09:53:21,570 | INFO     | . log creation = 0 s
[2025-11-27 04:53:58] 2025-11-27 09:53:21,571 | INFO     | ..............................
[2025-11-27 04:53:58] 2025-11-27 09:53:22,307 | INFO     | 
[2025-11-27 04:53:58] 2025-11-27 09:53:22,308 | INFO     | job summary report
[2025-11-27 04:53:58] 2025-11-27 09:53:22,308 | INFO     | --------------------------------------------------
[2025-11-27 04:53:58] 2025-11-27 09:53:22,308 | INFO     | PanDA job id: 6896297585
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | task id: 47556161
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | errors: (none)
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | pilot state: finished 
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | transexitcode: 0
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | exeerrorcode: 0
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | exeerrordiag: 
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | exitcode: 0
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | exitmsg: OK
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | cpuconsumptiontime: 197550 s
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | nevents: 1000
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | neventsw: 0
[2025-11-27 04:53:58] 2025-11-27 09:53:22,315 | INFO     | pid: 3635473
[2025-11-27 04:53:58] 2025-11-27 09:53:22,316 | INFO     | pgrp: 3635473
[2025-11-27 04:53:58] 2025-11-27 09:53:22,316 | INFO     | corecount: 8
[2025-11-27 04:53:58] 2025-11-27 09:53:22,316 | INFO     | event service: False
[2025-11-27 04:53:58] 2025-11-27 09:53:22,316 | INFO     | sizes: {0: 2284141, 1: 2284340, 8: 2284602, 11: 2284630, 43469: 2330540, 43476: 2339562, 43478: 2339746, 43493: 2339992}
[2025-11-27 04:53:58] 2025-11-27 09:53:22,316 | INFO     | --------------------------------------------------
[2025-11-27 04:53:58] 2025-11-27 09:53:22,316 | INFO     | 
[2025-11-27 04:53:58] 2025-11-27 09:53:22,316 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 04:53:58] 2025-11-27 09:53:22,414 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,414 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,415 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,416 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,416 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,416 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:53:58] 2025-11-27 09:53:22,416 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,416 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:53:58] 2025-11-27 09:53:22,416 | INFO     | job 6896297585 has completed (purged errors)
[2025-11-27 04:53:58] 2025-11-27 09:53:22,416 | INFO     | overall cleanup function is called
[2025-11-27 04:53:58] 2025-11-27 09:53:23,520 | INFO     | --- collectZombieJob: --- 10, [3635473]
[2025-11-27 04:53:58] 2025-11-27 09:53:23,522 | INFO     | zombie collector waiting for pid 3635473
[2025-11-27 04:53:58] 2025-11-27 09:53:23,522 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:53:58] 2025-11-27 09:53:23,522 | INFO     | collected zombie processes
[2025-11-27 04:53:58] 2025-11-27 09:53:23,523 | INFO     | will attempt to kill all subprocesses of pid=3635473
[2025-11-27 04:53:58] 2025-11-27 09:53:23,773 | INFO     | PID=3625023 has CPU usage=16.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 04:53:58] 2025-11-27 09:53:23,773 | INFO     | .. there are 46 such processes running
[2025-11-27 04:53:58] 2025-11-27 09:53:25,016 | INFO     | process IDs to be killed: [3635473] (in reverse order)
[2025-11-27 04:53:58] 2025-11-27 09:53:25,311 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:53:58] 2025-11-27 09:53:25,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:53:58] 2025-11-27 09:53:25,346 | INFO     | did not find any defunct processes belonging to 3635473
[2025-11-27 04:53:58] 2025-11-27 09:53:25,372 | INFO     | did not find any defunct processes belonging to 3635473
[2025-11-27 04:53:58] 2025-11-27 09:53:25,374 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:53:58] 2025-11-27 09:53:25,374 | INFO     | ready for new job
[2025-11-27 04:53:58] 2025-11-27 09:53:25,374 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:53:58] 2025-11-27 09:53:25,377 | INFO     | ***************************************
[2025-11-27 04:53:58] 2025-11-27 09:53:25,378 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:53:58] 2025-11-27 09:53:25,378 | INFO     | ***************************************
[2025-11-27 04:53:58] 2025-11-27 09:53:25,378 | INFO     | 
[2025-11-27 04:53:58] 2025-11-27 09:53:25,383 | INFO     | architecture information:
[2025-11-27 04:53:58] 2025-11-27 09:53:25,387 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:53:58] 2025-11-27 09:53:25,417 | INFO     | cat /etc/os-release:
[2025-11-27 04:53:58] NAME="CentOS Linux"
[2025-11-27 04:53:58] VERSION="7 (Core)"
[2025-11-27 04:53:58] ID="centos"
[2025-11-27 04:53:58] ID_LIKE="rhel fedora"
[2025-11-27 04:53:58] VERSION_ID="7"
[2025-11-27 04:53:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:53:58] ANSI_COLOR="0;31"
[2025-11-27 04:53:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:53:58] HOME_URL="https://www.centos.org/"
[2025-11-27 04:53:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:53:58] 
[2025-11-27 04:53:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:53:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:53:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:53:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:53:58] 
[2025-11-27 04:53:58] 2025-11-27 09:53:25,417 | INFO     | ***************************************
[2025-11-27 04:53:58] 2025-11-27 09:53:25,920 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 04:53:58] 2025-11-27 09:53:26,010 | INFO     | sufficient remaining disk space (67008200704 B)
[2025-11-27 04:53:58] 2025-11-27 09:53:26,010 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:53:58] 2025-11-27 09:53:26,011 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:53:58] 2025-11-27 09:53:26,011 | INFO     | update_server=False
[2025-11-27 04:53:58] 2025-11-27 09:53:26,011 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:53:58] 2025-11-27 09:53:26,011 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:53:58] 2025-11-27 09:53:26,205 | INFO     | all job control threads have been joined
[2025-11-27 04:53:58] 2025-11-27 09:53:26,218 | INFO     | all data control threads have been joined
[2025-11-27 04:53:58] 2025-11-27 09:53:26,279 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:53:58] 2025-11-27 09:53:26,423 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:53:58] 2025-11-27 09:53:26,424 | INFO     | aborting loop
[2025-11-27 04:53:58] 2025-11-27 09:53:26,919 | INFO     | all payload control threads have been joined
[2025-11-27 04:53:58] 2025-11-27 09:53:27,016 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:27,212 | INFO     | [job] control thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:27,227 | INFO     | [data] control thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:27,345 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:53:58] 2025-11-27 09:53:27,407 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:53:58] 2025-11-27 09:53:27,429 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:27,474 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:27,680 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:27,924 | INFO     | [payload] control thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:27,927 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:27,944 | INFO     | [job] validate thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:27,994 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:28,038 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:28,351 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:28,356 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:28,406 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:28,570 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:30,288 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:53:58] 2025-11-27 09:53:32,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139825429620544)>', '<ExcThread(monitor, started 139824774231808)>']
[2025-11-27 04:53:58] 2025-11-27 09:53:37,216 | INFO     | all workflow threads have been joined
[2025-11-27 04:53:58] 2025-11-27 09:53:37,219 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:53:58] 2025-11-27 09:53:37,220 | INFO     | traces error code: 0
[2025-11-27 04:53:58] 2025-11-27 09:53:37,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:53:58] 2025-11-27 09:53:57,096 | INFO     | PID=3625023 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:53:58] 2025-11-27 09:53:57,096 | INFO     | .. there are 46 such processes running
[2025-11-27 04:53:58] 2025-11-27 09:53:57,097 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:53:58] 2025-11-27 09:53:57,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:53:58] 2025-11-27 09:53:57,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:53:58] 2025-11-27 09:53:57,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:53:58] 2025-11-27 09:53:57,097 | INFO     | [monitor] control thread has ended
[2025-11-27 04:53:58] 2025-11-27 09:53:57,339 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:53:58] 2025-11-27 09:53:57,365 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:53:58] 2025-11-27 09:53:57,394 [wrapper] pilotpid: 3625023
[2025-11-27 04:53:58] 2025-11-27 09:53:57,427 [wrapper] Pilot exit status: 0
[2025-11-27 04:53:58] 2025-11-27 09:53:57,446 [wrapper] pandaids: 6896297585
[2025-11-27 04:53:58] 2025-11-27 09:53:57,590 [wrapper] cleanup supervisor_pilot 3165110 3625024
[2025-11-27 04:53:58] 2025-11-27 09:53:57,612 [wrapper] Test setup, not cleaning
[2025-11-27 04:53:58] 2025-11-27 09:53:57,629 [wrapper] apfmon messages muted
[2025-11-27 04:53:58] 2025-11-27 09:53:57,632 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:53:58] 2025-11-27 09:53:57,635 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:53:58]  *** Error codes and diagnostics ***
[2025-11-27 04:53:58]     "exeErrorCode": 0,
[2025-11-27 04:53:58]     "exeErrorDiag": "",
[2025-11-27 04:53:58]     "pilotErrorCode": 0,
[2025-11-27 04:53:58]     "pilotErrorDiag": "",
[2025-11-27 04:53:58]  *** Listing of results directory ***
[2025-11-27 04:53:58] total 1317872
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas    598293 Nov  6 03:41 pilot3.tar.gz
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas      5112 Nov 24 20:06 queuedata.json
[2025-11-27 04:53:58] -rwx------. 1 boincer umatlas     36292 Nov 24 20:09 runpilot2-wrapper.sh
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:53:58] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:47 run_atlas
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:47 job.xml
[2025-11-27 04:53:58] -rw-r--r--. 2 boincer umatlas 409805499 Nov 26 16:47 EVNT.47483658._002073.pool.root.1
[2025-11-27 04:53:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:47 start_atlas.sh
[2025-11-27 04:53:58] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:47 shared
[2025-11-27 04:53:58] -rw-r--r--. 2 boincer umatlas    611272 Nov 26 16:47 input.tar.gz
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:47 boinc_lockfile
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 16:47 pandaJob.out
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas        57 Nov 26 16:47 setup.sh.local
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas    991538 Nov 26 16:48 agis_schedconf.cvmfs.json
[2025-11-27 04:53:58] drwx------. 7 boincer umatlas      4096 Nov 26 16:48 pilot3
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas       532 Nov 27 04:41 boinc_task_state.xml
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 04:46 init_data.xml
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas 920490618 Nov 27 04:52 HITS.47556161._000562.pool.root.1
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas      1074 Nov 27 04:52 memory_monitor_summary.json
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas   1516240 Nov 27 04:53 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas   1930737 Nov 27 04:53 log.47556161._000562.job.log.tgz.1
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas      8633 Nov 27 04:53 heartbeat.json
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas       823 Nov 27 04:53 pilotlog.txt
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas        95 Nov 27 04:53 pilot_heartbeat.json
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 04:53 boinc_mmap_file
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas   5688034 Nov 27 04:53 log.47556161._000562.job.log.1
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas        29 Nov 27 04:53 wrapper_checkpoint.txt
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas       353 Nov 27 04:53 output.list
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas       620 Nov 27 04:53 runtime_log
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas   7639040 Nov 27 04:53 result.tar.gz
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 04:53 runtime_log.err
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas       665 Nov 27 04:53 6m9MDmFkwh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm71LKDmaSK6hm.diag
[2025-11-27 04:53:58] -rw-r--r--. 1 boincer umatlas     21249 Nov 27 04:53 stderr.txt
[2025-11-27 04:53:58] HITS file was successfully produced:
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas 920490618 Nov 27 04:52 shared/HITS.pool.root.1
[2025-11-27 04:53:58]  *** Contents of shared directory: ***
[2025-11-27 04:53:58] total 1307208
[2025-11-27 04:53:58] -rw-r--r--. 2 boincer umatlas 409805499 Nov 26 16:47 ATLAS.root_0
[2025-11-27 04:53:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:47 start_atlas.sh
[2025-11-27 04:53:58] -rw-r--r--. 2 boincer umatlas    611272 Nov 26 16:47 input.tar.gz
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas 920490618 Nov 27 04:52 HITS.pool.root.1
[2025-11-27 04:53:58] -rw-------. 1 boincer umatlas   7639040 Nov 27 04:53 result.tar.gz
04:53:59 (3617908): run_atlas exited; CPU time 198493.226704
04:53:59 (3617908): called boinc_finish(0)

</stderr_txt>
]]>

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