Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:42:05 (3216039): wrapper (7.7.26015): starting
16:42:05 (3216039): wrapper: running run_atlas (--nthreads 11)
[2025-11-26 16:42:05] Arguments: --nthreads 11
[2025-11-26 16:42:05] Threads: 11
[2025-11-26 16:42:05] Checking for CVMFS
[2025-11-26 16:42:05] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:42:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:42:05] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:42:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:42:06] 2.13.3.0 6673 8132 285008 153335 3 859 24106595 32935937 57773 16776704 0 77360969 99.751 50084006 30439 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:42:06] CVMFS is ok
[2025-11-26 16:42:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:42:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:42:06] Further information can be found at the LHC@home message board.
[2025-11-26 16:42:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:42:06] Checking for apptainer binary...
[2025-11-26 16:42:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:42:06] Running /usr/bin/apptainer --version
[2025-11-26 16:42:06] apptainer version 1.4.4-1.el9
[2025-11-26 16:42:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:42:06] lc-10-9.aglt2.org
[2025-11-26 16:42:06] apptainer works
[2025-11-26 16:42:06] Set ATHENA_PROC_NUMBER=11
[2025-11-26 16:42:06] Set ATHENA_CORE_NUMBER=11
[2025-11-26 16:42:06] Starting ATLAS job with PandaID=6894239175
[2025-11-26 16:42:06] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:13:08]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:13:08] 2025-11-27 03:12:08,477 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2717.9599791666665
[2025-11-26 22:13:08] 2025-11-27 03:12:08,578 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6894239175/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,580 | INFO     | extracted standard info from prmon json
[2025-11-26 22:13:08] 2025-11-27 03:12:08,580 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 22:13:08] 2025-11-27 03:12:08,580 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:13:08] 2025-11-27 03:12:08,580 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 22:13:08] 2025-11-27 03:12:08,580 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 22:13:08] 2025-11-27 03:12:08,612 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:13:08] 2025-11-27 03:12:08,613 | INFO     | sum of square deviations: 10450018915.064966
[2025-11-26 22:13:08] 2025-11-27 03:12:08,616 | INFO     | sum of deviations: -38593610540.40248
[2025-11-26 22:13:08] 2025-11-27 03:12:08,616 | INFO     | mean x: 1764203203.393189
[2025-11-26 22:13:08] 2025-11-27 03:12:08,616 | INFO     | mean y: 2748628.0897832816
[2025-11-26 22:13:08] 2025-11-27 03:12:08,616 | INFO     | intersect: 6518236485.028645
[2025-11-26 22:13:08] 2025-11-27 03:12:08,617 | INFO     | chi2: 3.3530165635654328
[2025-11-26 22:13:08] 2025-11-27 03:12:08,617 | INFO     | sum of square deviations: 9972213081.147804
[2025-11-26 22:13:08] 2025-11-27 03:12:08,620 | INFO     | sum of deviations: 8771409475.911938
[2025-11-26 22:13:08] 2025-11-27 03:12:08,620 | INFO     | mean x: 1764203050.8899372
[2025-11-26 22:13:08] 2025-11-27 03:12:08,620 | INFO     | mean y: 2763602.5974842766
[2025-11-26 22:13:08] 2025-11-27 03:12:08,620 | INFO     | intersect: -1549003014.5101018
[2025-11-26 22:13:08] 2025-11-27 03:12:08,621 | INFO     | chi2: 1.810421305494573
[2025-11-26 22:13:08] 2025-11-27 03:12:08,621 | INFO     | current chi2=1.810421305494573 (change=46.00619259782421 %)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,622 | INFO     | sum of square deviations: 9509236652.664526
[2025-11-26 22:13:08] 2025-11-27 03:12:08,624 | INFO     | sum of deviations: 8398787032.076681
[2025-11-26 22:13:08] 2025-11-27 03:12:08,624 | INFO     | mean x: 1764202898.3929713
[2025-11-26 22:13:08] 2025-11-27 03:12:08,625 | INFO     | mean y: 2763479.8530351436
[2025-11-26 22:13:08] 2025-11-27 03:12:08,625 | INFO     | intersect: -1555423046.173021
[2025-11-26 22:13:08] 2025-11-27 03:12:08,625 | INFO     | chi2: 1.8104500817547422
[2025-11-26 22:13:08] 2025-11-27 03:12:08,625 | INFO     | current chi2=1.8104500817547422 (change=-0.0015894786523908582 %)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,625 | INFO     | right removable region: 312
[2025-11-26 22:13:08] 2025-11-27 03:12:08,626 | INFO     | sum of square deviations: 9972194476.77986
[2025-11-26 22:13:08] 2025-11-27 03:12:08,628 | INFO     | sum of deviations: -93498707915.05031
[2025-11-26 22:13:08] 2025-11-27 03:12:08,629 | INFO     | mean x: 1764203355.8993711
[2025-11-26 22:13:08] 2025-11-27 03:12:08,629 | INFO     | mean y: 2766027.748427673
[2025-11-26 22:13:08] 2025-11-27 03:12:08,629 | INFO     | intersect: 16543832756.849304
[2025-11-26 22:13:08] 2025-11-27 03:12:08,629 | INFO     | chi2: 1.8827916439926584
[2025-11-26 22:13:08] 2025-11-27 03:12:08,629 | INFO     | current chi2=1.8827916439926584 (change=43.84782752189597 %)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,630 | INFO     | sum of square deviations: 9509161013.469666
[2025-11-26 22:13:08] 2025-11-27 03:12:08,632 | INFO     | sum of deviations: -100636634933.15335
[2025-11-26 22:13:08] 2025-11-27 03:12:08,633 | INFO     | mean x: 1764203508.4057508
[2025-11-26 22:13:08] 2025-11-27 03:12:08,633 | INFO     | mean y: 2768378.4185303515
[2025-11-26 22:13:08] 2025-11-27 03:12:08,633 | INFO     | intersect: 18673553758.08858
[2025-11-26 22:13:08] 2025-11-27 03:12:08,633 | INFO     | chi2: 1.8529137071137127
[2025-11-26 22:13:08] 2025-11-27 03:12:08,633 | INFO     | current chi2=1.8529137071137127 (change=1.586895553433962 %)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,633 | INFO     | left removable region: 20
[2025-11-26 22:13:08] 2025-11-27 03:12:08,634 | INFO     | sum of square deviations: 7720785213.188341
[2025-11-26 22:13:08] 2025-11-27 03:12:08,636 | INFO     | sum of deviations: -25178850816.16438
[2025-11-26 22:13:08] 2025-11-27 03:12:08,636 | INFO     | mean x: 1764203477.921233
[2025-11-26 22:13:08] 2025-11-27 03:12:08,636 | INFO     | mean y: 2774029.1232876712
[2025-11-26 22:13:08] 2025-11-27 03:12:08,637 | INFO     | intersect: 5756154670.260606
[2025-11-26 22:13:08] 2025-11-27 03:12:08,637 | INFO     | chi2: 0.1931028745599833
[2025-11-26 22:13:08] 2025-11-27 03:12:08,637 | INFO     | current memory leak: -3.26 B/s (using 292 data points, chi2=0.19)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,638 | INFO     | could have reported an average CPU frequency of 2704 MHz (14 samples)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,638 | INFO     | ..............................
[2025-11-26 22:13:08] 2025-11-27 03:12:08,638 | INFO     | . Timing measurements:
[2025-11-26 22:13:08] 2025-11-27 03:12:08,638 | INFO     | . get job = 0 s
[2025-11-26 22:13:08] 2025-11-27 03:12:08,638 | INFO     | . initial setup = 3 s
[2025-11-26 22:13:08] 2025-11-27 03:12:08,638 | INFO     | . payload setup = 10 s
[2025-11-26 22:13:08] 2025-11-27 03:12:08,639 | INFO     | . stage-in = 0 s
[2025-11-26 22:13:08] 2025-11-27 03:12:08,639 | INFO     | . payload execution = 19703 s
[2025-11-26 22:13:08] 2025-11-27 03:12:08,639 | INFO     | . stage-out = 8 s
[2025-11-26 22:13:08] 2025-11-27 03:12:08,639 | INFO     | . log creation = 0 s
[2025-11-26 22:13:08] 2025-11-27 03:12:08,639 | INFO     | ..............................
[2025-11-26 22:13:08] 2025-11-27 03:12:08,750 | INFO     | 
[2025-11-26 22:13:08] 2025-11-27 03:12:08,750 | INFO     | job summary report
[2025-11-26 22:13:08] 2025-11-27 03:12:08,750 | INFO     | --------------------------------------------------
[2025-11-26 22:13:08] 2025-11-27 03:12:08,750 | INFO     | PanDA job id: 6894239175
[2025-11-26 22:13:08] 2025-11-27 03:12:08,750 | INFO     | task id: 47523939
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | errors: (none)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | pilot state: finished 
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | transexitcode: 0
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | exeerrorcode: 0
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | exeerrordiag: 
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | exitcode: 0
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | exitmsg: OK
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | cpuconsumptiontime: 117831 s
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | nevents: 400
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | neventsw: 0
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | pid: 3227109
[2025-11-26 22:13:08] 2025-11-27 03:12:08,751 | INFO     | pgrp: 3227109
[2025-11-26 22:13:08] 2025-11-27 03:12:08,752 | INFO     | corecount: 11
[2025-11-26 22:13:08] 2025-11-27 03:12:08,752 | INFO     | event service: False
[2025-11-26 22:13:08] 2025-11-27 03:12:08,752 | INFO     | sizes: {0: 2283068, 1: 2283924, 8: 2284186, 12: 2284214, 19716: 2317225, 19725: 2326223, 19726: 2326407, 19764: 2326601}
[2025-11-26 22:13:08] 2025-11-27 03:12:08,752 | INFO     | --------------------------------------------------
[2025-11-26 22:13:08] 2025-11-27 03:12:08,752 | INFO     | 
[2025-11-26 22:13:08] 2025-11-27 03:12:08,752 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 22:13:08] 2025-11-27 03:12:08,799 | INFO     | time since job start (19783s) is within the limit (172800.0s)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,833 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,833 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,833 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,833 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,833 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,833 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,833 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,834 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,835 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,835 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:13:08] 2025-11-27 03:12:08,835 | INFO     | job 6894239175 has completed (purged errors)
[2025-11-26 22:13:08] 2025-11-27 03:12:08,835 | INFO     | overall cleanup function is called
[2025-11-26 22:13:08] 2025-11-27 03:12:09,857 | INFO     | --- collectZombieJob: --- 10, [3227109]
[2025-11-26 22:13:08] 2025-11-27 03:12:09,857 | INFO     | zombie collector waiting for pid 3227109
[2025-11-26 22:13:08] 2025-11-27 03:12:09,857 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:13:08] 2025-11-27 03:12:09,858 | INFO     | collected zombie processes
[2025-11-26 22:13:08] 2025-11-27 03:12:09,858 | INFO     | will attempt to kill all subprocesses of pid=3227109
[2025-11-26 22:13:08] 2025-11-27 03:12:11,689 | INFO     | process IDs to be killed: [3227109] (in reverse order)
[2025-11-26 22:13:08] 2025-11-27 03:12:12,107 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:13:08] 2025-11-27 03:12:12,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:13:08] 2025-11-27 03:12:12,142 | INFO     | did not find any defunct processes belonging to 3227109
[2025-11-26 22:13:08] 2025-11-27 03:12:12,173 | INFO     | did not find any defunct processes belonging to 3227109
[2025-11-26 22:13:08] 2025-11-27 03:12:12,177 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:13:08] 2025-11-27 03:12:12,178 | INFO     | ready for new job
[2025-11-26 22:13:08] 2025-11-27 03:12:12,178 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:13:08] 2025-11-27 03:12:12,180 | INFO     | ***************************************
[2025-11-26 22:13:08] 2025-11-27 03:12:12,180 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:13:08] 2025-11-27 03:12:12,180 | INFO     | ***************************************
[2025-11-26 22:13:08] 2025-11-27 03:12:12,180 | INFO     | 
[2025-11-26 22:13:08] 2025-11-27 03:12:12,193 | INFO     | architecture information:
[2025-11-26 22:13:08] 2025-11-27 03:12:12,201 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:13:08] 2025-11-27 03:12:12,259 | INFO     | cat /etc/os-release:
[2025-11-26 22:13:08] NAME="CentOS Linux"
[2025-11-26 22:13:08] VERSION="7 (Core)"
[2025-11-26 22:13:08] ID="centos"
[2025-11-26 22:13:08] ID_LIKE="rhel fedora"
[2025-11-26 22:13:08] VERSION_ID="7"
[2025-11-26 22:13:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:13:08] ANSI_COLOR="0;31"
[2025-11-26 22:13:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:13:08] HOME_URL="https://www.centos.org/"
[2025-11-26 22:13:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:13:08] 
[2025-11-26 22:13:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:13:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:13:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:13:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:13:08] 
[2025-11-26 22:13:08] 2025-11-27 03:12:12,260 | INFO     | ***************************************
[2025-11-26 22:13:08] 2025-11-27 03:12:12,763 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 22:13:08] 2025-11-27 03:12:12,914 | INFO     | sufficient remaining disk space (87370498048 B)
[2025-11-26 22:13:08] 2025-11-27 03:12:12,915 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:13:08] 2025-11-27 03:12:12,915 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:13:08] 2025-11-27 03:12:12,915 | INFO     | update_server=False
[2025-11-26 22:13:08] 2025-11-27 03:12:12,915 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:13:08] 2025-11-27 03:12:12,916 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:13:08] 2025-11-27 03:12:13,009 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:13:08] 2025-11-27 03:12:13,009 | INFO     | aborting loop
[2025-11-26 22:13:08] 2025-11-27 03:12:13,232 | INFO     | all job control threads have been joined
[2025-11-26 22:13:08] 2025-11-27 03:12:13,549 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:13:08] 2025-11-27 03:12:13,828 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:13:08] 2025-11-27 03:12:13,921 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:13,989 | INFO     | all data control threads have been joined
[2025-11-26 22:13:08] 2025-11-27 03:12:14,015 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:14,238 | INFO     | [job] control thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:14,295 | INFO     | all payload control threads have been joined
[2025-11-26 22:13:08] 2025-11-27 03:12:14,421 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:14,449 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:14,709 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:14,726 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:14,840 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:14,892 | INFO     | [job] validate thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:14,995 | INFO     | [data] control thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:15,160 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:15,167 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:15,168 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:15,301 | INFO     | [payload] control thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:15,556 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:16,925 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:13:08] 2025-11-27 03:12:23,352 [wrapper] supervise_pilot (15 min periods counter: 23)
[2025-11-26 22:13:08] 2025-11-27 03:12:44,354 | INFO     | PID=3220113 has CPU usage=4.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:13:08] 2025-11-27 03:12:44,356 | INFO     | .. there are 96 such processes running
[2025-11-26 22:13:08] 2025-11-27 03:12:44,357 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:13:08] 2025-11-27 03:12:44,357 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:13:08] 2025-11-27 03:12:44,357 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:13:08] 2025-11-27 03:13:00,623 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:13:08] 2025-11-27 03:13:02,540 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140079225182016)>', '<ExcThread(monitor, started 140078588348160)>']
[2025-11-26 22:13:08] 2025-11-27 03:13:03,500 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:13:08] 2025-11-27 03:13:03,500 | INFO     | [monitor] control thread has ended
[2025-11-26 22:13:08] 2025-11-27 03:13:07,587 | INFO     | all workflow threads have been joined
[2025-11-26 22:13:08] 2025-11-27 03:13:07,588 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:13:08] 2025-11-27 03:13:07,588 | INFO     | traces error code: 0
[2025-11-26 22:13:08] 2025-11-27 03:13:07,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:13:08] 2025-11-27 03:13:07,931 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:13:08] 2025-11-27 03:13:07,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:13:08] 2025-11-27 03:13:07,943 [wrapper] pilotpid: 3220113
[2025-11-26 22:13:08] 2025-11-27 03:13:07,964 [wrapper] Pilot exit status: 0
[2025-11-26 22:13:08] 2025-11-27 03:13:08,019 [wrapper] pandaids: 6894239175
[2025-11-26 22:13:08] 2025-11-27 03:13:08,163 [wrapper] cleanup supervisor_pilot 1694726 3220114
[2025-11-26 22:13:08] 2025-11-27 03:13:08,167 [wrapper] Test setup, not cleaning
[2025-11-26 22:13:08] 2025-11-27 03:13:08,170 [wrapper] apfmon messages muted
[2025-11-26 22:13:08] 2025-11-27 03:13:08,173 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:13:08] 2025-11-27 03:13:08,176 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:13:08]  *** Error codes and diagnostics ***
[2025-11-26 22:13:08]     "exeErrorCode": 0,
[2025-11-26 22:13:08]     "exeErrorDiag": "",
[2025-11-26 22:13:08]     "pilotErrorCode": 0,
[2025-11-26 22:13:08]     "pilotErrorDiag": "",
[2025-11-26 22:13:08]  *** Listing of results directory ***
[2025-11-26 22:13:08] total 625296
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 04:44 pilot3.tar.gz
[2025-11-26 22:13:08] -rwx------. 1 boincer umatlas     36292 Nov 25 05:21 runpilot2-wrapper.sh
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 05:21 queuedata.json
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:13:08] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:42 run_atlas
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:42 job.xml
[2025-11-26 22:13:08] -rw-r--r--. 2 boincer umatlas 297259225 Nov 26 16:42 EVNT.47523935._000002.pool.root.1
[2025-11-26 22:13:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:42 start_atlas.sh
[2025-11-26 22:13:08] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:42 shared
[2025-11-26 22:13:08] -rw-r--r--. 2 boincer umatlas    589939 Nov 26 16:42 input.tar.gz
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:42 boinc_lockfile
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas      2609 Nov 26 16:42 pandaJob.out
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas        57 Nov 26 16:42 setup.sh.local
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas    991538 Nov 26 16:42 agis_schedconf.cvmfs.json
[2025-11-26 22:13:08] drwx------. 5 boincer umatlas      4096 Nov 26 16:42 pilot3
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas 333227734 Nov 26 22:08 HITS.47523939._000049.pool.root.1
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas       532 Nov 26 22:08 boinc_task_state.xml
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas      1062 Nov 26 22:11 memory_monitor_summary.json
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:11 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas    575096 Nov 26 22:11 log.47523939._000049.job.log.tgz.1
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas      7826 Nov 26 22:12 heartbeat.json
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas      6887 Nov 26 22:12 init_data.xml
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas        95 Nov 26 22:12 pilot_heartbeat.json
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas      4824 Nov 26 22:13 pilotlog.txt
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 22:13 boinc_mmap_file
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas        29 Nov 26 22:13 wrapper_checkpoint.txt
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas   2372511 Nov 26 22:13 log.47523939._000049.job.log.1
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas       357 Nov 26 22:13 output.list
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas       620 Nov 26 22:13 runtime_log
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas   2969600 Nov 26 22:13 result.tar.gz
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas      9340 Nov 26 22:13 runtime_log.err
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas       658 Nov 26 22:13 AbBMDmOM5h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCKMKDmIW0cMm.diag
[2025-11-26 22:13:08] -rw-r--r--. 1 boincer umatlas     21298 Nov 26 22:13 stderr.txt
[2025-11-26 22:13:08] HITS file was successfully produced:
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas 333227734 Nov 26 22:08 shared/HITS.pool.root.1
[2025-11-26 22:13:08]  *** Contents of shared directory: ***
[2025-11-26 22:13:08] total 619216
[2025-11-26 22:13:08] -rw-r--r--. 2 boincer umatlas 297259225 Nov 26 16:42 ATLAS.root_0
[2025-11-26 22:13:08] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:42 start_atlas.sh
[2025-11-26 22:13:08] -rw-r--r--. 2 boincer umatlas    589939 Nov 26 16:42 input.tar.gz
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas 333227734 Nov 26 22:08 HITS.pool.root.1
[2025-11-26 22:13:08] -rw-------. 1 boincer umatlas   2969600 Nov 26 22:13 result.tar.gz
22:13:09 (3216039): run_atlas exited; CPU time 119221.979325
22:13:09 (3216039): called boinc_finish(0)

</stderr_txt>
]]>

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