Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
22:18:27 (954409): wrapper (7.7.26015): starting
22:18:27 (954409): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 22:18:27] Arguments: --nthreads 3
[2025-11-26 22:18:27] Threads: 3
[2025-11-26 22:18:27] Checking for CVMFS
[2025-11-26 22:18:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 22:18:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 22:18:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 22:18:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 22:18:28] 2.9.2.0 828885 36 54200 153335 4 1 35749168 36864001 0 130560 0 375620 99.999 2657 2958 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 22:18:28] CVMFS is ok
[2025-11-26 22:18:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 22:18:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 22:18:28] Further information can be found at the LHC@home message board.
[2025-11-26 22:18:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:18:28] Checking for apptainer binary...
[2025-11-26 22:18:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 22:18:28] Running /usr/bin/apptainer --version
[2025-11-26 22:18:28] apptainer version 1.4.1-1.1
[2025-11-26 22:18:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:18:28] thA335
[2025-11-26 22:18:28] apptainer works
[2025-11-26 22:18:28] Set ATHENA_PROC_NUMBER=3
[2025-11-26 22:18:28] Set ATHENA_CORE_NUMBER=3
[2025-11-26 22:18:28] Starting ATLAS job with PandaID=6896922938
[2025-11-26 22:18:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:22:42]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:22:42] 2025-11-26 21:21:53,265 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:22:42] 2025-11-26 21:21:53,265 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:22:42] 2025-11-26 21:21:53,265 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:22:42] 2025-11-26 21:21:53,352 | INFO     | all data control threads have been joined
[2025-11-26 22:22:42] 2025-11-26 21:21:53,490 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 22:22:42] 2025-11-26 21:21:53,490 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 22:22:42] 2025-11-26 21:21:53,491 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:22:42] 2025-11-26 21:21:53,491 | INFO     | will abort loop
[2025-11-26 22:22:42] 2025-11-26 21:21:53,738 | INFO     | all job control threads have been joined
[2025-11-26 22:22:42] 2025-11-26 21:21:54,270 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:54,271 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:54,358 | INFO     | [data] control thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:54,458 | INFO     | all payload control threads have been joined
[2025-11-26 22:22:42] 2025-11-26 21:21:54,497 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:54,501 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:54,745 | INFO     | [job] control thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:54,987 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:55,271 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:55,284 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:55,313 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:55,458 | INFO     | [job] validate thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:55,464 | INFO     | [payload] control thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:55,544 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:55,599 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:55,635 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:21:57,272 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:22:42] 2025-11-26 21:22:35,710 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:22:42] 2025-11-26 21:22:37,335 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139698465662784)>', '<ExcThread(monitor, started 139697686828800)>']
[2025-11-26 22:22:42] 2025-11-26 21:22:37,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:22:42] 2025-11-26 21:22:37,499 | INFO     | [monitor] control thread has ended
[2025-11-26 22:22:42] 2025-11-26 21:22:42,360 | INFO     | all workflow threads have been joined
[2025-11-26 22:22:42] 2025-11-26 21:22:42,361 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:22:42] 2025-11-26 21:22:42,361 | INFO     | traces error code: 0
[2025-11-26 22:22:42] 2025-11-26 21:22:42,362 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:22:42] 2025-11-26 21:22:42,406 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:22:42] 2025-11-26 21:22:42,410 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:22:42] 2025-11-26 21:22:42,413 [wrapper] pilotpid: 958130
[2025-11-26 22:22:42] 2025-11-26 21:22:42,416 [wrapper] Pilot exit status: 0
[2025-11-26 22:22:42] 2025-11-26 21:22:42,423 [wrapper] pandaids: 6896922938
[2025-11-26 22:22:42] 2025-11-26 21:22:42,439 [wrapper] cleanup supervisor_pilot  958136 958131
[2025-11-26 22:22:42] 2025-11-26 21:22:42,442 [wrapper] Test setup, not cleaning
[2025-11-26 22:22:42] 2025-11-26 21:22:42,445 [wrapper] apfmon messages muted
[2025-11-26 22:22:42] 2025-11-26 21:22:42,448 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:22:42] 2025-11-26 21:22:42,451 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:22:42]  *** Error codes and diagnostics ***
[2025-11-26 22:22:42]     "exeErrorCode": 65,
[2025-11-26 22:22:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 22:22:42]     "pilotErrorCode": 1305,
[2025-11-26 22:22:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 22:22:42]  *** Listing of results directory ***
[2025-11-26 22:22:42] total 403576
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc    576529 Nov 25 11:51 pilot3.tar.gz
[2025-11-26 22:22:42] -rwx------ 1 boinc boinc     36292 Nov 25 12:16 runpilot2-wrapper.sh
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc      5112 Nov 25 12:16 queuedata.json
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc       100 Nov 26 22:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:22:42] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 22:18 run_atlas
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc       105 Nov 26 22:18 job.xml
[2025-11-26 22:22:42] -rw-r--r-- 2 boinc boinc 409062201 Nov 26 22:18 EVNT.47483658._003075.pool.root.1
[2025-11-26 22:22:42] -rw-r--r-- 2 boinc boinc    590102 Nov 26 22:18 input.tar.gz
[2025-11-26 22:22:42] -rw-r--r-- 2 boinc boinc     15847 Nov 26 22:18 start_atlas.sh
[2025-11-26 22:22:42] drwxrwx--x 2 boinc boinc      4096 Nov 26 22:18 shared
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc         0 Nov 26 22:18 boinc_setup_complete
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc      6196 Nov 26 22:18 init_data.xml
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc         0 Nov 26 22:18 boinc_lockfile
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc      2785 Nov 26 22:18 pandaJob.out
[2025-11-26 22:22:42] -rw------- 1 boinc boinc    991538 Nov 26 22:18 agis_schedconf.cvmfs.json
[2025-11-26 22:22:42] -rw------- 1 boinc boinc   1516240 Nov 26 22:18 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:22:42] drwx------ 5 boinc boinc      4096 Nov 26 22:18 pilot3
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc       523 Nov 26 22:19 boinc_task_state.xml
[2025-11-26 22:22:42] -rw------- 1 boinc boinc       960 Nov 26 22:19 memory_monitor_summary.json
[2025-11-26 22:22:42] -rw------- 1 boinc boinc     55821 Nov 26 22:19 log.47556173._000577.job.log.tgz.1
[2025-11-26 22:22:42] -rw------- 1 boinc boinc        95 Nov 26 22:21 pilot_heartbeat.json
[2025-11-26 22:22:42] -rw------- 1 boinc boinc      8411 Nov 26 22:21 heartbeat.json
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc      8192 Nov 26 22:22 boinc_mmap_file
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc        23 Nov 26 22:22 wrapper_checkpoint.txt
[2025-11-26 22:22:42] -rw------- 1 boinc boinc      4742 Nov 26 22:22 pilotlog.txt
[2025-11-26 22:22:42] -rw------- 1 boinc boinc     93812 Nov 26 22:22 log.47556173._000577.job.log.1
[2025-11-26 22:22:42] -rw------- 1 boinc boinc       186 Nov 26 22:22 output.list
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc       620 Nov 26 22:22 runtime_log
[2025-11-26 22:22:42] -rw------- 1 boinc boinc    174080 Nov 26 22:22 result.tar.gz
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc      8744 Nov 26 22:22 runtime_log.err
[2025-11-26 22:22:42] -rw------- 1 boinc boinc       649 Nov 26 22:22 0rfNDmUD6h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmhRJKDmlC8epm.diag
[2025-11-26 22:22:42] -rw-r--r-- 1 boinc boinc      7176 Nov 26 22:22 stderr.txt
[2025-11-26 22:22:42] No HITS result produced
[2025-11-26 22:22:42]  *** Contents of shared directory: ***
[2025-11-26 22:22:42] total 400248
[2025-11-26 22:22:42] -rw-r--r-- 2 boinc boinc 409062201 Nov 26 22:18 ATLAS.root_0
[2025-11-26 22:22:42] -rw-r--r-- 2 boinc boinc    590102 Nov 26 22:18 input.tar.gz
[2025-11-26 22:22:42] -rw-r--r-- 2 boinc boinc     15847 Nov 26 22:18 start_atlas.sh
[2025-11-26 22:22:42] -rw------- 1 boinc boinc    174080 Nov 26 22:22 result.tar.gz
22:22:43 (954409): run_atlas exited; CPU time 30.663073
22:22:43 (954409): called boinc_finish(0)

</stderr_txt>
]]>

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