Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:08:02 (630037): wrapper (7.7.26015): starting
16:08:02 (630037): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:08:02] Arguments: --nthreads 8
[2025-11-26 16:08:02] Threads: 8
[2025-11-26 16:08:02] Checking for CVMFS
[2025-11-26 16:08:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:08:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:08:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:08:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:08:03] 2.13.3.0 16090 30521 432820 153334 2 860 19114755 32935936 65033 16776704 0 432158442 99.628 388658377 52275 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:08:03] CVMFS is ok
[2025-11-26 16:08:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:08:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:08:04] Further information can be found at the LHC@home message board.
[2025-11-26 16:08:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:08:04] Checking for apptainer binary...
[2025-11-26 16:08:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:08:04] Running /usr/bin/apptainer --version
[2025-11-26 16:08:04] apptainer version 1.4.4-1.el9
[2025-11-26 16:08:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:08:04] c7-9-15.aglt2.org
[2025-11-26 16:08:04] apptainer works
[2025-11-26 16:08:04] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:08:04] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:08:04] Starting ATLAS job with PandaID=6891583742
[2025-11-26 16:08:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:37:56]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:37:56] 2025-11-27 07:36:55,313 | INFO     | time since job start (37652s) is within the limit (172800.0s)
[2025-11-27 02:37:56] 2025-11-27 07:36:56,785 | INFO     | monitor loop #2317: job 0:6891583742 is in state 'finished'
[2025-11-27 02:37:56] 2025-11-27 07:36:56,785 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:37:56] 2025-11-27 07:36:57,332 | INFO     | time since job start (37654s) is within the limit (172800.0s)
[2025-11-27 02:37:56] 2025-11-27 07:36:59,293 | INFO     | monitor loop #2318: job 0:6891583742 is in state 'finished'
[2025-11-27 02:37:56] 2025-11-27 07:36:59,293 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:37:56] 2025-11-27 07:36:59,341 | INFO     | time since job start (37656s) is within the limit (172800.0s)
[2025-11-27 02:37:56] 2025-11-27 07:37:01,349 | INFO     | time since job start (37658s) is within the limit (172800.0s)
[2025-11-27 02:37:56] 2025-11-27 07:37:01,803 | INFO     | monitor loop #2319: job 0:6891583742 is in state 'finished'
[2025-11-27 02:37:56] 2025-11-27 07:37:01,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:37:56] 2025-11-27 07:37:03,357 | INFO     | time since job start (37660s) is within the limit (172800.0s)
[2025-11-27 02:37:56] 2025-11-27 07:37:04,311 | INFO     | monitor loop #2320: job 0:6891583742 is in state 'finished'
[2025-11-27 02:37:56] 2025-11-27 07:37:04,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:37:56] 2025-11-27 07:37:05,376 | INFO     | time since job start (37662s) is within the limit (172800.0s)
[2025-11-27 02:37:56] 2025-11-27 07:37:05,626 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 02:37:56] 2025-11-27 07:37:05,635 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2383593749996
[2025-11-27 02:37:56] 2025-11-27 07:37:05,670 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6891583742/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:37:56] 2025-11-27 07:37:05,671 | INFO     | extracted standard info from prmon json
[2025-11-27 02:37:56] 2025-11-27 07:37:05,671 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:37:56] 2025-11-27 07:37:05,671 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:37:56] 2025-11-27 07:37:05,681 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:37:56] 2025-11-27 07:37:05,682 | INFO     | sum of square deviations: 72128126142.86847
[2025-11-27 02:37:56] 2025-11-27 07:37:05,691 | INFO     | sum of deviations: -164931403204.5903
[2025-11-27 02:37:56] 2025-11-27 07:37:05,691 | INFO     | mean x: 1764210242.0146341
[2025-11-27 02:37:56] 2025-11-27 07:37:05,691 | INFO     | mean y: 2838453.954471545
[2025-11-27 02:37:56] 2025-11-27 07:37:05,691 | INFO     | intersect: 4036960596.3630323
[2025-11-27 02:37:56] 2025-11-27 07:37:05,695 | INFO     | chi2: 20.795267092060893
[2025-11-27 02:37:56] 2025-11-27 07:37:05,696 | INFO     | sum of square deviations: 70383362810.17882
[2025-11-27 02:37:56] 2025-11-27 07:37:05,704 | INFO     | sum of deviations: 41453245051.35881
[2025-11-27 02:37:56] 2025-11-27 07:37:05,705 | INFO     | mean x: 1764210089.522951
[2025-11-27 02:37:56] 2025-11-27 07:37:05,705 | INFO     | mean y: 2856487.8672131146
[2025-11-27 02:37:56] 2025-11-27 07:37:05,705 | INFO     | intersect: -1036199195.7935596
[2025-11-27 02:37:56] 2025-11-27 07:37:05,705 | INFO     | chi2: 17.166022899376884
[2025-11-27 02:37:56] 2025-11-27 07:37:05,705 | INFO     | current chi2=17.166022899376884 (change=17.45226053898371 %)
[2025-11-27 02:37:56] 2025-11-27 07:37:05,705 | INFO     | right removable region: 609
[2025-11-27 02:37:56] 2025-11-27 07:37:05,705 | INFO     | sum of square deviations: 70382982170.17882
[2025-11-27 02:37:56] 2025-11-27 07:37:05,714 | INFO     | sum of deviations: -396108981984.6594
[2025-11-27 02:37:56] 2025-11-27 07:37:05,714 | INFO     | mean x: 1764210394.522951
[2025-11-27 02:37:56] 2025-11-27 07:37:05,714 | INFO     | mean y: 2858647.832786885
[2025-11-27 02:37:56] 2025-11-27 07:37:05,714 | INFO     | intersect: 9931673282.19378
[2025-11-27 02:37:56] 2025-11-27 07:37:05,715 | INFO     | chi2: 17.206695316027478
[2025-11-27 02:37:56] 2025-11-27 07:37:05,715 | INFO     | current chi2=17.206695316027478 (change=17.256675570199533 %)
[2025-11-27 02:37:56] 2025-11-27 07:37:05,715 | INFO     | left removable region: 10
[2025-11-27 02:37:56] 2025-11-27 07:37:05,715 | INFO     | sum of square deviations: 66643776925.19274
[2025-11-27 02:37:56] 2025-11-27 07:37:05,728 | INFO     | sum of deviations: -200708186969.47757
[2025-11-27 02:37:56] 2025-11-27 07:37:05,728 | INFO     | mean x: 1764210364.036728
[2025-11-27 02:37:56] 2025-11-27 07:37:05,728 | INFO     | mean y: 2885888.021702838
[2025-11-27 02:37:56] 2025-11-27 07:37:05,728 | INFO     | intersect: 5316082107.318207
[2025-11-27 02:37:56] 2025-11-27 07:37:05,728 | INFO     | chi2: 12.449903803851779
[2025-11-27 02:37:56] 2025-11-27 07:37:05,728 | INFO     | current memory leak: -3.01 B/s (using 599 data points, chi2=12.45)
[2025-11-27 02:37:56] 2025-11-27 07:37:05,729 | INFO     | could have reported an average CPU frequency of 3796 MHz (24 samples)
[2025-11-27 02:37:56] 2025-11-27 07:37:05,729 | INFO     | ..............................
[2025-11-27 02:37:56] 2025-11-27 07:37:05,729 | INFO     | . Timing measurements:
[2025-11-27 02:37:56] 2025-11-27 07:37:05,729 | INFO     | . get job = 0 s
[2025-11-27 02:37:56] 2025-11-27 07:37:05,729 | INFO     | . initial setup = 3 s
[2025-11-27 02:37:56] 2025-11-27 07:37:05,730 | INFO     | . payload setup = 43 s
[2025-11-27 02:37:56] 2025-11-27 07:37:05,730 | INFO     | . stage-in = 0 s
[2025-11-27 02:37:56] 2025-11-27 07:37:05,730 | INFO     | . payload execution = 37485 s
[2025-11-27 02:37:56] 2025-11-27 07:37:05,730 | INFO     | . stage-out = 8 s
[2025-11-27 02:37:56] 2025-11-27 07:37:05,730 | INFO     | . log creation = 1 s
[2025-11-27 02:37:56] 2025-11-27 07:37:05,730 | INFO     | ..............................
[2025-11-27 02:37:56] 2025-11-27 07:37:06,229 | INFO     | 
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | job summary report
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | --------------------------------------------------
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | PanDA job id: 6891583742
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | task id: 47493068
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | errors: (none)
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | pilot state: finished 
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | transexitcode: 0
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | exeerrorcode: 0
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | exeerrordiag: 
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | exitcode: 0
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | exitmsg: OK
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | cpuconsumptiontime: 138117 s
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | nevents: 1000
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | neventsw: 0
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | pid: 690126
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | pgrp: 690126
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | corecount: 8
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | event service: False
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | sizes: {0: 2284304, 1: 2284304, 11: 2284332, 22: 2284360, 33: 2284388, 36: 2284706, 44: 2284862, 37533: 2327384, 37541: 2336378, 37544: 2336434, 37586: 2336680}
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | --------------------------------------------------
[2025-11-27 02:37:56] 2025-11-27 07:37:06,230 | INFO     | 
[2025-11-27 02:37:56] 2025-11-27 07:37:06,231 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,355 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,356 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:37:56] 2025-11-27 07:37:06,356 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,356 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:37:56] 2025-11-27 07:37:06,356 | INFO     | job 6891583742 has completed (purged errors)
[2025-11-27 02:37:56] 2025-11-27 07:37:06,356 | INFO     | overall cleanup function is called
[2025-11-27 02:37:56] 2025-11-27 07:37:07,390 | INFO     | --- collectZombieJob: --- 10, [690126]
[2025-11-27 02:37:56] 2025-11-27 07:37:07,391 | INFO     | zombie collector waiting for pid 690126
[2025-11-27 02:37:56] 2025-11-27 07:37:07,391 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:37:56] 2025-11-27 07:37:07,391 | INFO     | collected zombie processes
[2025-11-27 02:37:56] 2025-11-27 07:37:07,391 | INFO     | will attempt to kill all subprocesses of pid=690126
[2025-11-27 02:37:56] 2025-11-27 07:37:09,843 | INFO     | process IDs to be killed: [690126] (in reverse order)
[2025-11-27 02:37:56] 2025-11-27 07:37:10,556 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:37:56] 2025-11-27 07:37:10,557 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:37:56] 2025-11-27 07:37:10,630 | INFO     | did not find any defunct processes belonging to 690126
[2025-11-27 02:37:56] 2025-11-27 07:37:10,931 | INFO     | did not find any defunct processes belonging to 690126
[2025-11-27 02:37:56] 2025-11-27 07:37:10,971 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:37:56] 2025-11-27 07:37:10,972 | INFO     | ready for new job
[2025-11-27 02:37:56] 2025-11-27 07:37:10,972 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:37:56] 2025-11-27 07:37:10,981 | INFO     | ***************************************
[2025-11-27 02:37:56] 2025-11-27 07:37:10,981 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:37:56] 2025-11-27 07:37:10,981 | INFO     | ***************************************
[2025-11-27 02:37:56] 2025-11-27 07:37:10,981 | INFO     | 
[2025-11-27 02:37:56] 2025-11-27 07:37:11,008 | INFO     | architecture information:
[2025-11-27 02:37:56] 2025-11-27 07:37:11,038 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:37:56] 2025-11-27 07:37:11,103 | INFO     | cat /etc/os-release:
[2025-11-27 02:37:56] NAME="CentOS Linux"
[2025-11-27 02:37:56] VERSION="7 (Core)"
[2025-11-27 02:37:56] ID="centos"
[2025-11-27 02:37:56] ID_LIKE="rhel fedora"
[2025-11-27 02:37:56] VERSION_ID="7"
[2025-11-27 02:37:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:37:56] ANSI_COLOR="0;31"
[2025-11-27 02:37:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:37:56] HOME_URL="https://www.centos.org/"
[2025-11-27 02:37:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:37:56] 
[2025-11-27 02:37:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:37:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:37:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:37:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:37:56] 
[2025-11-27 02:37:56] 2025-11-27 07:37:11,103 | INFO     | ***************************************
[2025-11-27 02:37:56] 2025-11-27 07:37:11,606 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 02:37:56] 2025-11-27 07:37:11,694 | INFO     | sufficient remaining disk space (55789486080 B)
[2025-11-27 02:37:56] 2025-11-27 07:37:11,694 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:37:56] 2025-11-27 07:37:11,694 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:37:56] 2025-11-27 07:37:11,698 | INFO     | update_server=False
[2025-11-27 02:37:56] 2025-11-27 07:37:11,698 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:37:56] 2025-11-27 07:37:11,698 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:37:56] 2025-11-27 07:37:11,782 | INFO     | all job control threads have been joined
[2025-11-27 02:37:56] 2025-11-27 07:37:11,783 | INFO     | all data control threads have been joined
[2025-11-27 02:37:56] 2025-11-27 07:37:11,861 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 02:37:56] 2025-11-27 07:37:11,862 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 02:37:56] 2025-11-27 07:37:11,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:37:56] 2025-11-27 07:37:11,862 | INFO     | will abort loop
[2025-11-27 02:37:56] 2025-11-27 07:37:12,195 | INFO     | all payload control threads have been joined
[2025-11-27 02:37:56] 2025-11-27 07:37:12,262 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:37:56] 2025-11-27 07:37:12,704 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:12,705 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:12,788 | INFO     | [job] control thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:12,789 | INFO     | [data] control thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:12,867 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:12,913 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:12,962 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:13,201 | INFO     | [payload] control thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:13,860 | INFO     | [job] validate thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:13,921 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:13,982 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:14,003 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:14,004 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:14,011 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:14,277 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:15,051 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:37:56] 2025-11-27 07:37:19,063 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:37:56] 2025-11-27 07:37:29,157 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:37:56] 2025-11-27 07:37:30,109 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139738631903040)>', '<ExcThread(monitor, started 139738145081088)>']
[2025-11-27 02:37:56] 2025-11-27 07:37:35,134 | INFO     | all workflow threads have been joined
[2025-11-27 02:37:56] 2025-11-27 07:37:35,134 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:37:56] 2025-11-27 07:37:35,135 | INFO     | traces error code: 0
[2025-11-27 02:37:56] 2025-11-27 07:37:35,135 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:37:56] 2025-11-27 07:37:37,444 | INFO     | 37667s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 02:37:56] 2025-11-27 07:37:40,252 | INFO     | PID=652354 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 02:37:56] 2025-11-27 07:37:40,252 | INFO     | .. there are 102 such processes running
[2025-11-27 02:37:56] 2025-11-27 07:37:40,253 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:37:56] 2025-11-27 07:37:40,253 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:37:56] 2025-11-27 07:37:40,253 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:37:56] 2025-11-27 07:37:40,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:37:56] 2025-11-27 07:37:40,260 | INFO     | [monitor] control thread has ended
[2025-11-27 02:37:56] 2025-11-27 07:37:40,812 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:37:56] 2025-11-27 07:37:40,848 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:37:56] 2025-11-27 07:37:40,874 [wrapper] pilotpid: 652354
[2025-11-27 02:37:56] 2025-11-27 07:37:40,889 [wrapper] Pilot exit status: 0
[2025-11-27 02:37:56] 2025-11-27 07:37:40,953 [wrapper] pandaids: 6891583742
[2025-11-27 02:37:56] 2025-11-27 07:37:41,137 [wrapper] cleanup supervisor_pilot 2587567 652355
[2025-11-27 02:37:56] 2025-11-27 07:37:41,140 [wrapper] Test setup, not cleaning
[2025-11-27 02:37:56] 2025-11-27 07:37:41,142 [wrapper] apfmon messages muted
[2025-11-27 02:37:56] 2025-11-27 07:37:41,144 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:37:56] 2025-11-27 07:37:41,146 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:37:56]  *** Error codes and diagnostics ***
[2025-11-27 02:37:56]     "exeErrorCode": 0,
[2025-11-27 02:37:56]     "exeErrorDiag": "",
[2025-11-27 02:37:56]     "pilotErrorCode": 0,
[2025-11-27 02:37:56]     "pilotErrorDiag": "",
[2025-11-27 02:37:56]  *** Listing of results directory ***
[2025-11-27 02:37:56] total 1311092
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 11:45 pilot3.tar.gz
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 12:10 queuedata.json
[2025-11-27 02:37:56] -rwx------. 1 boincer umatlas     36292 Nov 18 12:10 runpilot2-wrapper.sh
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:37:56] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:08 run_atlas
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:08 job.xml
[2025-11-27 02:37:56] -rw-r--r--. 2 boincer umatlas 411116564 Nov 26 16:08 EVNT.47493065._000441.pool.root.1
[2025-11-27 02:37:56] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 16:08 start_atlas.sh
[2025-11-27 02:37:56] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:08 shared
[2025-11-27 02:37:56] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 16:08 input.tar.gz
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:08 boinc_lockfile
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 16:08 pandaJob.out
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas    991538 Nov 26 16:09 agis_schedconf.cvmfs.json
[2025-11-27 02:37:56] drwx------. 5 boincer umatlas      4096 Nov 26 16:09 pilot3
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:12 boinc_task_state.xml
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas 914202481 Nov 27 02:35 HITS.47493068._004403.pool.root.1
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas      7171 Nov 27 02:36 init_data.xml
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas      1053 Nov 27 02:36 memory_monitor_summary.json
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:36 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas   1834852 Nov 27 02:36 log.47493068._004403.job.log.tgz.1
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas      8595 Nov 27 02:37 heartbeat.json
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas        95 Nov 27 02:37 pilot_heartbeat.json
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas       939 Nov 27 02:37 pilotlog.txt
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas   4827984 Nov 27 02:37 log.47493068._004403.job.log.1
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas       353 Nov 27 02:37 output.list
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:37 runtime_log
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas   6686720 Nov 27 02:37 result.tar.gz
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas       659 Nov 27 02:37 uBCLDmEPef8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdXFKDmGdxxZn.diag
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas      8699 Nov 27 02:37 runtime_log.err
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:37 wrapper_checkpoint.txt
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:37 boinc_mmap_file
[2025-11-27 02:37:56] -rw-r--r--. 1 boincer umatlas     21790 Nov 27 02:37 stderr.txt
[2025-11-27 02:37:56] HITS file was successfully produced:
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas 914202481 Nov 27 02:35 shared/HITS.pool.root.1
[2025-11-27 02:37:56]  *** Contents of shared directory: ***
[2025-11-27 02:37:56] total 1301392
[2025-11-27 02:37:56] -rw-r--r--. 2 boincer umatlas 411116564 Nov 26 16:08 ATLAS.root_0
[2025-11-27 02:37:56] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 16:08 start_atlas.sh
[2025-11-27 02:37:56] -rw-r--r--. 2 boincer umatlas    590097 Nov 26 16:08 input.tar.gz
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas 914202481 Nov 27 02:35 HITS.pool.root.1
[2025-11-27 02:37:56] -rw-------. 1 boincer umatlas   6686720 Nov 27 02:37 result.tar.gz
02:37:58 (630037): run_atlas exited; CPU time 139010.316725
02:37:58 (630037): called boinc_finish(0)

</stderr_txt>
]]>

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