Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:55:46 (1303928): wrapper (7.7.26015): starting
18:55:46 (1303928): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 18:55:46] Arguments: --nthreads 8
[2025-11-26 18:55:46] Threads: 8
[2025-11-26 18:55:46] Checking for CVMFS
[2025-11-26 18:55:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:55:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:55:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:55:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:55:48] 2.13.3.0 7314 30676 254628 153340 0 787 35108341 40960001 61911 16776704 0 454006265 99.750 285694935 50451 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:55:48] CVMFS is ok
[2025-11-26 18:55:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:55:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:55:48] Further information can be found at the LHC@home message board.
[2025-11-26 18:55:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:55:48] Checking for apptainer binary...
[2025-11-26 18:55:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:55:48] Running /usr/bin/apptainer --version
[2025-11-26 18:55:48] apptainer version 1.4.4-1.el9
[2025-11-26 18:55:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:55:49] c8-16-1.aglt2.org
[2025-11-26 18:55:49] apptainer works
[2025-11-26 18:55:49] Set ATHENA_PROC_NUMBER=8
[2025-11-26 18:55:49] Set ATHENA_CORE_NUMBER=8
[2025-11-26 18:55:49] Starting ATLAS job with PandaID=6896922945
[2025-11-26 18:55:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:56:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:56:21] 2025-11-27 10:55:11,043 | INFO     | monitor loop #2361: job 0:6896922945 is in state 'finished'
[2025-11-27 05:56:21] 2025-11-27 10:55:11,043 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:56:21] 2025-11-27 10:55:11,683 | INFO     | time since job start (39487s) is within the limit (172800.0s)
[2025-11-27 05:56:21] 2025-11-27 10:55:13,552 | INFO     | monitor loop #2362: job 0:6896922945 is in state 'finished'
[2025-11-27 05:56:21] 2025-11-27 10:55:13,552 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:56:21] 2025-11-27 10:55:13,692 | INFO     | time since job start (39489s) is within the limit (172800.0s)
[2025-11-27 05:56:21] 2025-11-27 10:55:15,699 | INFO     | time since job start (39491s) is within the limit (172800.0s)
[2025-11-27 05:56:21] 2025-11-27 10:55:16,057 | INFO     | monitor loop #2363: job 0:6896922945 is in state 'finished'
[2025-11-27 05:56:21] 2025-11-27 10:55:16,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:56:21] 2025-11-27 10:55:17,709 | INFO     | time since job start (39493s) is within the limit (172800.0s)
[2025-11-27 05:56:21] 2025-11-27 10:55:18,565 | INFO     | monitor loop #2364: job 0:6896922945 is in state 'finished'
[2025-11-27 05:56:21] 2025-11-27 10:55:18,565 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:56:21] 2025-11-27 10:55:19,716 | INFO     | time since job start (39495s) is within the limit (172800.0s)
[2025-11-27 05:56:21] 2025-11-27 10:55:20,598 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 05:56:21] 2025-11-27 10:55:20,614 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3790.045531249999
[2025-11-27 05:56:21] 2025-11-27 10:55:20,661 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896922945/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:56:21] 2025-11-27 10:55:20,662 | INFO     | extracted standard info from prmon json
[2025-11-27 05:56:21] 2025-11-27 10:55:20,662 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:56:21] 2025-11-27 10:55:20,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:56:21] 2025-11-27 10:55:20,676 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:56:21] 2025-11-27 10:55:20,676 | INFO     | sum of square deviations: 82817873287.42264
[2025-11-27 05:56:21] 2025-11-27 10:55:20,689 | INFO     | sum of deviations: 670855125999.6631
[2025-11-27 05:56:21] 2025-11-27 10:55:20,690 | INFO     | mean x: 1764221210.1397514
[2025-11-27 05:56:21] 2025-11-27 10:55:20,690 | INFO     | mean y: 2774580.7593167704
[2025-11-27 05:56:21] 2025-11-27 10:55:20,690 | INFO     | intersect: -14288063800.37214
[2025-11-27 05:56:21] 2025-11-27 10:55:20,698 | INFO     | chi2: 22.827244253734598
[2025-11-27 05:56:21] 2025-11-27 10:55:20,699 | INFO     | sum of square deviations: 80904094348.87329
[2025-11-27 05:56:21] 2025-11-27 10:55:20,720 | INFO     | sum of deviations: 867277148117.1589
[2025-11-27 05:56:21] 2025-11-27 10:55:20,720 | INFO     | mean x: 1764221057.6525822
[2025-11-27 05:56:21] 2025-11-27 10:55:20,720 | INFO     | mean y: 2790236.3881064164
[2025-11-27 05:56:21] 2025-11-27 10:55:20,720 | INFO     | intersect: -18909338004.380928
[2025-11-27 05:56:21] 2025-11-27 10:55:20,721 | INFO     | chi2: 19.793921549556533
[2025-11-27 05:56:21] 2025-11-27 10:55:20,721 | INFO     | current chi2=19.793921549556533 (change=13.288168604415777 %)
[2025-11-27 05:56:21] 2025-11-27 10:55:20,721 | INFO     | right removable region: 638
[2025-11-27 05:56:21] 2025-11-27 10:55:20,722 | INFO     | sum of square deviations: 80903450188.87326
[2025-11-27 05:56:21] 2025-11-27 10:55:20,758 | INFO     | sum of deviations: 433846305433.99207
[2025-11-27 05:56:21] 2025-11-27 10:55:20,758 | INFO     | mean x: 1764221362.6525822
[2025-11-27 05:56:21] 2025-11-27 10:55:20,758 | INFO     | mean y: 2793455.0359937404
[2025-11-27 05:56:21] 2025-11-27 10:55:20,758 | INFO     | intersect: -9457877485.049726
[2025-11-27 05:56:21] 2025-11-27 10:55:20,759 | INFO     | chi2: 18.93728742893522
[2025-11-27 05:56:21] 2025-11-27 10:55:20,759 | INFO     | current chi2=18.93728742893522 (change=17.040851631326326 %)
[2025-11-27 05:56:21] 2025-11-27 10:55:20,759 | INFO     | left removable region: 10
[2025-11-27 05:56:21] 2025-11-27 10:55:20,759 | INFO     | sum of square deviations: 76796784551.30579
[2025-11-27 05:56:21] 2025-11-27 10:55:20,791 | INFO     | sum of deviations: 453165972867.5889
[2025-11-27 05:56:21] 2025-11-27 10:55:20,791 | INFO     | mean x: 1764221332.1815286
[2025-11-27 05:56:21] 2025-11-27 10:55:20,792 | INFO     | mean y: 2831897.7404458597
[2025-11-27 05:56:21] 2025-11-27 10:55:20,792 | INFO     | intersect: -10407565894.600489
[2025-11-27 05:56:21] 2025-11-27 10:55:20,792 | INFO     | chi2: 11.55269209076923
[2025-11-27 05:56:21] 2025-11-27 10:55:20,792 | INFO     | current memory leak: 5.90 B/s (using 628 data points, chi2=11.55)
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | could have reported an average CPU frequency of 3798 MHz (25 samples)
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | ..............................
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | . Timing measurements:
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | . get job = 0 s
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | . initial setup = 4 s
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | . payload setup = 49 s
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | . stage-in = 0 s
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | . payload execution = 39320 s
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | . stage-out = 5 s
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | . log creation = 1 s
[2025-11-27 05:56:21] 2025-11-27 10:55:20,793 | INFO     | ..............................
[2025-11-27 05:56:21] 2025-11-27 10:55:20,960 | INFO     | 
[2025-11-27 05:56:21] 2025-11-27 10:55:20,960 | INFO     | job summary report
[2025-11-27 05:56:21] 2025-11-27 10:55:20,960 | INFO     | --------------------------------------------------
[2025-11-27 05:56:21] 2025-11-27 10:55:20,960 | INFO     | PanDA job id: 6896922945
[2025-11-27 05:56:21] 2025-11-27 10:55:20,960 | INFO     | task id: 47556173
[2025-11-27 05:56:21] 2025-11-27 10:55:20,960 | INFO     | errors: (none)
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | pilot state: finished 
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | transexitcode: 0
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | exeerrorcode: 0
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | exeerrordiag: 
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | exitcode: 0
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | exitmsg: OK
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | cpuconsumptiontime: 138315 s
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | nevents: 1000
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | neventsw: 0
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | pid: 1352310
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | pgrp: 1352310
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | corecount: 8
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | event service: False
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | sizes: {0: 2284086, 1: 2284341, 12: 2284341, 23: 2284369, 33: 2284397, 42: 2284715, 44: 2284899, 39371: 2327988, 39378: 2336982, 39379: 2337038, 39412: 2337348}
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | --------------------------------------------------
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | 
[2025-11-27 05:56:21] 2025-11-27 10:55:20,961 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 05:56:21] 2025-11-27 10:55:21,044 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,044 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | job 6896922945 has completed (purged errors)
[2025-11-27 05:56:21] 2025-11-27 10:55:21,045 | INFO     | overall cleanup function is called
[2025-11-27 05:56:21] 2025-11-27 10:55:22,106 | INFO     | --- collectZombieJob: --- 10, [1352310]
[2025-11-27 05:56:21] 2025-11-27 10:55:22,106 | INFO     | zombie collector waiting for pid 1352310
[2025-11-27 05:56:21] 2025-11-27 10:55:22,106 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:56:21] 2025-11-27 10:55:22,106 | INFO     | collected zombie processes
[2025-11-27 05:56:21] 2025-11-27 10:55:22,107 | INFO     | will attempt to kill all subprocesses of pid=1352310
[2025-11-27 05:56:21] 2025-11-27 10:55:24,165 | INFO     | PID=1323808 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 05:56:21] 2025-11-27 10:55:24,165 | INFO     | .. there are 94 such processes running
[2025-11-27 05:56:21] 2025-11-27 10:55:24,489 | INFO     | process IDs to be killed: [1352310] (in reverse order)
[2025-11-27 05:56:21] 2025-11-27 10:55:24,904 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:56:21] 2025-11-27 10:55:24,904 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:56:21] 2025-11-27 10:55:24,946 | INFO     | did not find any defunct processes belonging to 1352310
[2025-11-27 05:56:21] 2025-11-27 10:55:24,996 | INFO     | did not find any defunct processes belonging to 1352310
[2025-11-27 05:56:21] 2025-11-27 10:55:25,024 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:56:21] 2025-11-27 10:55:25,024 | INFO     | ready for new job
[2025-11-27 05:56:21] 2025-11-27 10:55:25,024 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:56:21] 2025-11-27 10:55:25,027 | INFO     | ***************************************
[2025-11-27 05:56:21] 2025-11-27 10:55:25,027 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:56:21] 2025-11-27 10:55:25,027 | INFO     | ***************************************
[2025-11-27 05:56:21] 2025-11-27 10:55:25,027 | INFO     | 
[2025-11-27 05:56:21] 2025-11-27 10:55:25,032 | INFO     | architecture information:
[2025-11-27 05:56:21] 2025-11-27 10:55:25,038 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:56:21] 2025-11-27 10:55:25,290 | INFO     | cat /etc/os-release:
[2025-11-27 05:56:21] NAME="CentOS Linux"
[2025-11-27 05:56:21] VERSION="7 (Core)"
[2025-11-27 05:56:21] ID="centos"
[2025-11-27 05:56:21] ID_LIKE="rhel fedora"
[2025-11-27 05:56:21] VERSION_ID="7"
[2025-11-27 05:56:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:56:21] ANSI_COLOR="0;31"
[2025-11-27 05:56:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:56:21] HOME_URL="https://www.centos.org/"
[2025-11-27 05:56:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:56:21] 
[2025-11-27 05:56:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:56:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:56:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:56:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:56:21] 
[2025-11-27 05:56:21] 2025-11-27 10:55:25,290 | INFO     | ***************************************
[2025-11-27 05:56:21] 2025-11-27 10:55:25,794 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 05:56:21] 2025-11-27 10:55:25,891 | INFO     | sufficient remaining disk space (158567759872 B)
[2025-11-27 05:56:21] 2025-11-27 10:55:25,891 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:56:21] 2025-11-27 10:55:25,891 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:56:21] 2025-11-27 10:55:25,891 | INFO     | update_server=False
[2025-11-27 05:56:21] 2025-11-27 10:55:25,891 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:56:21] 2025-11-27 10:55:25,891 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:56:21] 2025-11-27 10:55:25,892 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:56:21] 2025-11-27 10:55:25,982 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:56:21] 2025-11-27 10:55:26,170 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 05:56:21] 2025-11-27 10:55:26,170 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 05:56:21] 2025-11-27 10:55:26,170 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:56:21] 2025-11-27 10:55:26,171 | INFO     | will abort loop
[2025-11-27 05:56:21] 2025-11-27 10:55:26,198 | INFO     | all payload control threads have been joined
[2025-11-27 05:56:21] 2025-11-27 10:55:26,395 | INFO     | all data control threads have been joined
[2025-11-27 05:56:21] 2025-11-27 10:55:26,897 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:26,902 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:26,989 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:27,122 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:27,122 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:27,176 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:27,204 | INFO     | [payload] control thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:27,316 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:27,401 | INFO     | [data] control thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:27,511 | INFO     | all job control threads have been joined
[2025-11-27 05:56:21] 2025-11-27 10:55:27,525 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:27,546 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:27,899 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:27,960 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:28,260 | INFO     | [job] validate thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:28,517 | INFO     | [job] control thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:29,905 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:56:21] 2025-11-27 10:55:57,510 | INFO     | PID=1323808 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 05:56:21] 2025-11-27 10:55:57,510 | INFO     | .. there are 94 such processes running
[2025-11-27 05:56:21] 2025-11-27 10:55:57,510 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:56:21] 2025-11-27 10:55:57,510 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:56:21] 2025-11-27 10:55:57,510 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:56:21] 2025-11-27 10:56:14,126 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:56:21] 2025-11-27 10:56:14,620 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700150589248)>', '<ExcThread(monitor, started 139699431659264)>']
[2025-11-27 05:56:21] 2025-11-27 10:56:14,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:56:21] 2025-11-27 10:56:14,638 | INFO     | [monitor] control thread has ended
[2025-11-27 05:56:21] 2025-11-27 10:56:19,645 | INFO     | all workflow threads have been joined
[2025-11-27 05:56:21] 2025-11-27 10:56:19,645 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:56:21] 2025-11-27 10:56:19,646 | INFO     | traces error code: 0
[2025-11-27 05:56:21] 2025-11-27 10:56:19,646 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:56:21] 2025-11-27 10:56:20,124 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:56:21] 2025-11-27 10:56:20,179 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:56:21] 2025-11-27 10:56:20,219 [wrapper] pilotpid: 1323808
[2025-11-27 05:56:21] 2025-11-27 10:56:20,234 [wrapper] Pilot exit status: 0
[2025-11-27 05:56:21] 2025-11-27 10:56:20,351 [wrapper] pandaids: 6896922945
[2025-11-27 05:56:21] 2025-11-27 10:56:20,789 [wrapper] cleanup supervisor_pilot  190506 1323810
[2025-11-27 05:56:21] 2025-11-27 10:56:20,810 [wrapper] Test setup, not cleaning
[2025-11-27 05:56:21] 2025-11-27 10:56:20,831 [wrapper] apfmon messages muted
[2025-11-27 05:56:21] 2025-11-27 10:56:20,848 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:56:21] 2025-11-27 10:56:20,865 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:56:21]  *** Error codes and diagnostics ***
[2025-11-27 05:56:21]     "exeErrorCode": 0,
[2025-11-27 05:56:21]     "exeErrorDiag": "",
[2025-11-27 05:56:21]     "pilotErrorCode": 0,
[2025-11-27 05:56:21]     "pilotErrorDiag": "",
[2025-11-27 05:56:21]  *** Listing of results directory ***
[2025-11-27 05:56:21] total 1304264
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 05:51 pilot3.tar.gz
[2025-11-27 05:56:21] -rwx------. 1 boincer umatlas     36292 Nov 25 06:19 runpilot2-wrapper.sh
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 06:19 queuedata.json
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:56:21] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:55 run_atlas
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:55 job.xml
[2025-11-27 05:56:21] -rw-r--r--. 2 boincer umatlas 408716119 Nov 26 18:55 EVNT.47483658._003076.pool.root.1
[2025-11-27 05:56:21] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:55 shared
[2025-11-27 05:56:21] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 18:55 input.tar.gz
[2025-11-27 05:56:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:55 start_atlas.sh
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:55 boinc_lockfile
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas      2785 Nov 26 18:55 pandaJob.out
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas        57 Nov 26 18:55 setup.sh.local
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas    991538 Nov 26 18:57 agis_schedconf.cvmfs.json
[2025-11-27 05:56:21] drwx------. 5 boincer umatlas      4096 Nov 26 18:57 pilot3
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas       533 Nov 27 05:33 boinc_task_state.xml
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas      7174 Nov 27 05:48 init_data.xml
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas 909141128 Nov 27 05:53 HITS.47556173._000584.pool.root.1
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas      1052 Nov 27 05:54 memory_monitor_summary.json
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas   1516240 Nov 27 05:54 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas   1864335 Nov 27 05:54 log.47556173._000584.job.log.tgz.1
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas        95 Nov 27 05:55 pilot_heartbeat.json
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas      8579 Nov 27 05:55 heartbeat.json
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas        29 Nov 27 05:56 wrapper_checkpoint.txt
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas      5011 Nov 27 05:56 pilotlog.txt
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas   5024826 Nov 27 05:56 log.47556173._000584.job.log.1
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas       353 Nov 27 05:56 output.list
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas       620 Nov 27 05:56 runtime_log
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas   6912000 Nov 27 05:56 result.tar.gz
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 05:56 boinc_mmap_file
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 05:56 runtime_log.err
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas       659 Nov 27 05:56 r2tLDmTG6h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmCLMKDmEdAfRo.diag
[2025-11-27 05:56:21] -rw-r--r--. 1 boincer umatlas     21866 Nov 27 05:56 stderr.txt
[2025-11-27 05:56:21] HITS file was successfully produced:
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas 909141128 Nov 27 05:53 shared/HITS.pool.root.1
[2025-11-27 05:56:21]  *** Contents of shared directory: ***
[2025-11-27 05:56:21] total 1294332
[2025-11-27 05:56:21] -rw-r--r--. 2 boincer umatlas 408716119 Nov 26 18:55 ATLAS.root_0
[2025-11-27 05:56:21] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 18:55 input.tar.gz
[2025-11-27 05:56:21] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:55 start_atlas.sh
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas 909141128 Nov 27 05:53 HITS.pool.root.1
[2025-11-27 05:56:21] -rw-------. 1 boincer umatlas   6912000 Nov 27 05:56 result.tar.gz
05:56:43 (1303928): run_atlas exited; CPU time 139206.547269
05:56:43 (1303928): called boinc_finish(0)

</stderr_txt>
]]>

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