Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:21:19 (57842): wrapper (7.7.26015): starting
16:21:19 (57842): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:21:19] Arguments: --nthreads 8
[2025-11-26 16:21:19] Threads: 8
[2025-11-26 16:21:19] Checking for CVMFS
[2025-11-26 16:21:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:21:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:21:19] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:21:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:21:19] 2.13.3.0 12213 30583 243620 153335 3 604 34753155 40960001 52373 16776704 0 281310942 99.727 201332655 35547 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:21:19] CVMFS is ok
[2025-11-26 16:21:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:21:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:21:19] Further information can be found at the LHC@home message board.
[2025-11-26 16:21:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:21:19] Checking for apptainer binary...
[2025-11-26 16:21:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:21:19] Running /usr/bin/apptainer --version
[2025-11-26 16:21:19] apptainer version 1.4.4-1.el9
[2025-11-26 16:21:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:21:19] c7-3-35.aglt2.org
[2025-11-26 16:21:19] apptainer works
[2025-11-26 16:21:19] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:21:19] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:21:19] Starting ATLAS job with PandaID=6896766806
[2025-11-26 16:21:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:52:12]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:52:12] 2025-11-27 08:50:43,913 | INFO     | time since job start (41348s) is within the limit (172800.0s)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,489 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 03:52:12] 2025-11-27 08:50:45,517 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3294.305031249998
[2025-11-27 03:52:12] 2025-11-27 08:50:45,589 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6896766806/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,590 | INFO     | extracted standard info from prmon json
[2025-11-27 03:52:12] 2025-11-27 08:50:45,590 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:52:12] 2025-11-27 08:50:45,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:52:12] 2025-11-27 08:50:45,600 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:52:12] 2025-11-27 08:50:45,601 | INFO     | sum of square deviations: 96217979166.9132
[2025-11-27 03:52:12] 2025-11-27 08:50:45,611 | INFO     | sum of deviations: 294609918887.6399
[2025-11-27 03:52:12] 2025-11-27 08:50:45,612 | INFO     | mean x: 1764212745.5967503
[2025-11-27 03:52:12] 2025-11-27 08:50:45,612 | INFO     | mean y: 2897876.6543574594
[2025-11-27 03:52:12] 2025-11-27 08:50:45,612 | INFO     | intersect: -5398946751.355964
[2025-11-27 03:52:12] 2025-11-27 08:50:45,613 | INFO     | chi2: 10.097002400560614
[2025-11-27 03:52:12] 2025-11-27 08:50:45,613 | INFO     | sum of square deviations: 94102006895.11957
[2025-11-27 03:52:12] 2025-11-27 08:50:45,623 | INFO     | sum of deviations: 528641851561.79205
[2025-11-27 03:52:12] 2025-11-27 08:50:45,624 | INFO     | mean x: 1764212593.1011906
[2025-11-27 03:52:12] 2025-11-27 08:50:45,624 | INFO     | mean y: 2914749.3854166665
[2025-11-27 03:52:12] 2025-11-27 08:50:45,624 | INFO     | intersect: -9907996213.492393
[2025-11-27 03:52:12] 2025-11-27 08:50:45,624 | INFO     | chi2: 6.70344942221846
[2025-11-27 03:52:12] 2025-11-27 08:50:45,625 | INFO     | current chi2=6.70344942221846 (change=33.60950947336344 %)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,625 | INFO     | sum of square deviations: 92017291023.29868
[2025-11-27 03:52:12] 2025-11-27 08:50:45,634 | INFO     | sum of deviations: 786345878103.255
[2025-11-27 03:52:12] 2025-11-27 08:50:45,635 | INFO     | mean x: 1764212440.6056972
[2025-11-27 03:52:12] 2025-11-27 08:50:45,635 | INFO     | mean y: 2933600.301349325
[2025-11-27 03:52:12] 2025-11-27 08:50:45,635 | INFO     | intersect: -15073376138.240242
[2025-11-27 03:52:12] 2025-11-27 08:50:45,636 | INFO     | chi2: 2.8183843566876963
[2025-11-27 03:52:12] 2025-11-27 08:50:45,636 | INFO     | current chi2=2.8183843566876963 (change=57.956207630265496 %)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,636 | INFO     | sum of square deviations: 89963598988.95016
[2025-11-27 03:52:12] 2025-11-27 08:50:45,645 | INFO     | sum of deviations: 881927277515.4174
[2025-11-27 03:52:12] 2025-11-27 08:50:45,645 | INFO     | mean x: 1764212288.110272
[2025-11-27 03:52:12] 2025-11-27 08:50:45,645 | INFO     | mean y: 2940693.3504531723
[2025-11-27 03:52:12] 2025-11-27 08:50:45,645 | INFO     | intersect: -17291909198.142246
[2025-11-27 03:52:12] 2025-11-27 08:50:45,646 | INFO     | chi2: 2.1633208528040915
[2025-11-27 03:52:12] 2025-11-27 08:50:45,646 | INFO     | current chi2=2.1633208528040915 (change=23.242518442497587 %)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,646 | INFO     | right removable region: 661
[2025-11-27 03:52:12] 2025-11-27 08:50:45,647 | INFO     | sum of square deviations: 94101760455.11949
[2025-11-27 03:52:12] 2025-11-27 08:50:45,655 | INFO     | sum of deviations: 132301484126.05875
[2025-11-27 03:52:12] 2025-11-27 08:50:45,655 | INFO     | mean x: 1764212898.1011906
[2025-11-27 03:52:12] 2025-11-27 08:50:45,655 | INFO     | mean y: 2909542.675595238
[2025-11-27 03:52:12] 2025-11-27 08:50:45,655 | INFO     | intersect: -2477468971.012716
[2025-11-27 03:52:12] 2025-11-27 08:50:45,656 | INFO     | chi2: 8.113476828315001
[2025-11-27 03:52:12] 2025-11-27 08:50:45,656 | INFO     | current chi2=8.113476828315001 (change=19.644697441445413 %)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,656 | INFO     | left removable region: 10
[2025-11-27 03:52:12] 2025-11-27 08:50:45,657 | INFO     | sum of square deviations: 85553041473.28429
[2025-11-27 03:52:12] 2025-11-27 08:50:45,665 | INFO     | sum of deviations: 695227924779.4102
[2025-11-27 03:52:12] 2025-11-27 08:50:45,665 | INFO     | mean x: 1764212562.6205838
[2025-11-27 03:52:12] 2025-11-27 08:50:45,665 | INFO     | mean y: 2956038.4470046083
[2025-11-27 03:52:12] 2025-11-27 08:50:45,665 | INFO     | intersect: -14333528295.233675
[2025-11-27 03:52:12] 2025-11-27 08:50:45,666 | INFO     | chi2: 0.05589231405334257
[2025-11-27 03:52:12] 2025-11-27 08:50:45,666 | INFO     | current memory leak: 8.13 B/s (using 651 data points, chi2=0.06)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,666 | INFO     | could have reported an average CPU frequency of 3255 MHz (26 samples)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,667 | INFO     | ..............................
[2025-11-27 03:52:12] 2025-11-27 08:50:45,667 | INFO     | . Timing measurements:
[2025-11-27 03:52:12] 2025-11-27 08:50:45,667 | INFO     | . get job = 0 s
[2025-11-27 03:52:12] 2025-11-27 08:50:45,667 | INFO     | . initial setup = 2 s
[2025-11-27 03:52:12] 2025-11-27 08:50:45,667 | INFO     | . payload setup = 8 s
[2025-11-27 03:52:12] 2025-11-27 08:50:45,667 | INFO     | . stage-in = 0 s
[2025-11-27 03:52:12] 2025-11-27 08:50:45,667 | INFO     | . payload execution = 41292 s
[2025-11-27 03:52:12] 2025-11-27 08:50:45,667 | INFO     | . stage-out = 3 s
[2025-11-27 03:52:12] 2025-11-27 08:50:45,667 | INFO     | . log creation = 0 s
[2025-11-27 03:52:12] 2025-11-27 08:50:45,667 | INFO     | ..............................
[2025-11-27 03:52:12] 2025-11-27 08:50:45,757 | INFO     | 
[2025-11-27 03:52:12] 2025-11-27 08:50:45,757 | INFO     | job summary report
[2025-11-27 03:52:12] 2025-11-27 08:50:45,757 | INFO     | --------------------------------------------------
[2025-11-27 03:52:12] 2025-11-27 08:50:45,757 | INFO     | PanDA job id: 6896766806
[2025-11-27 03:52:12] 2025-11-27 08:50:45,757 | INFO     | task id: 47556185
[2025-11-27 03:52:12] 2025-11-27 08:50:45,757 | INFO     | errors: (none)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,757 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | pilot state: finished 
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | transexitcode: 0
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | exeerrorcode: 0
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | exeerrordiag: 
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | exitcode: 0
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | exitmsg: OK
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | cpuconsumptiontime: 204494 s
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | nevents: 1000
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | neventsw: 0
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | pid: 86067
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | pgrp: 86067
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | corecount: 8
[2025-11-27 03:52:12] 2025-11-27 08:50:45,758 | INFO     | event service: False
[2025-11-27 03:52:12] 2025-11-27 08:50:45,759 | INFO     | sizes: {0: 2284198, 1: 2284340, 7: 2284602, 11: 2284630, 41305: 2330150, 41311: 2339144, 41314: 2339328, 41334: 2339574}
[2025-11-27 03:52:12] 2025-11-27 08:50:45,759 | INFO     | --------------------------------------------------
[2025-11-27 03:52:12] 2025-11-27 08:50:45,759 | INFO     | 
[2025-11-27 03:52:12] 2025-11-27 08:50:45,759 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 03:52:12] 2025-11-27 08:50:45,934 | INFO     | time since job start (41350s) is within the limit (172800.0s)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,937 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,937 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,937 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,937 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,937 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,937 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:52:12] 2025-11-27 08:50:45,939 | INFO     | job 6896766806 has completed (purged errors)
[2025-11-27 03:52:12] 2025-11-27 08:50:45,939 | INFO     | overall cleanup function is called
[2025-11-27 03:52:12] 2025-11-27 08:50:46,969 | INFO     | --- collectZombieJob: --- 10, [86067]
[2025-11-27 03:52:12] 2025-11-27 08:50:46,969 | INFO     | zombie collector waiting for pid 86067
[2025-11-27 03:52:12] 2025-11-27 08:50:46,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:52:12] 2025-11-27 08:50:46,969 | INFO     | collected zombie processes
[2025-11-27 03:52:12] 2025-11-27 08:50:46,969 | INFO     | will attempt to kill all subprocesses of pid=86067
[2025-11-27 03:52:12] 2025-11-27 08:50:47,811 | INFO     | process IDs to be killed: [86067] (in reverse order)
[2025-11-27 03:52:12] 2025-11-27 08:50:48,125 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:52:12] 2025-11-27 08:50:48,125 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:52:12] 2025-11-27 08:50:48,198 | INFO     | did not find any defunct processes belonging to 86067
[2025-11-27 03:52:12] 2025-11-27 08:50:48,231 | INFO     | did not find any defunct processes belonging to 86067
[2025-11-27 03:52:12] 2025-11-27 08:50:48,232 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:52:12] 2025-11-27 08:50:48,232 | INFO     | ready for new job
[2025-11-27 03:52:12] 2025-11-27 08:50:48,232 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:52:12] 2025-11-27 08:50:48,235 | INFO     | ***************************************
[2025-11-27 03:52:12] 2025-11-27 08:50:48,235 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:52:12] 2025-11-27 08:50:48,235 | INFO     | ***************************************
[2025-11-27 03:52:12] 2025-11-27 08:50:48,236 | INFO     | 
[2025-11-27 03:52:12] 2025-11-27 08:50:48,240 | INFO     | architecture information:
[2025-11-27 03:52:12] 2025-11-27 08:50:48,241 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:52:12] 2025-11-27 08:50:48,264 | INFO     | cat /etc/os-release:
[2025-11-27 03:52:12] NAME="CentOS Linux"
[2025-11-27 03:52:12] VERSION="7 (Core)"
[2025-11-27 03:52:12] ID="centos"
[2025-11-27 03:52:12] ID_LIKE="rhel fedora"
[2025-11-27 03:52:12] VERSION_ID="7"
[2025-11-27 03:52:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:52:12] ANSI_COLOR="0;31"
[2025-11-27 03:52:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:52:12] HOME_URL="https://www.centos.org/"
[2025-11-27 03:52:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:52:12] 
[2025-11-27 03:52:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:52:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:52:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:52:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:52:12] 
[2025-11-27 03:52:12] 2025-11-27 08:50:48,264 | INFO     | ***************************************
[2025-11-27 03:52:12] 2025-11-27 08:50:48,767 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 03:52:12] 2025-11-27 08:50:48,916 | INFO     | sufficient remaining disk space (116699168768 B)
[2025-11-27 03:52:12] 2025-11-27 08:50:48,916 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:52:12] 2025-11-27 08:50:48,917 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:52:12] 2025-11-27 08:50:48,917 | INFO     | update_server=False
[2025-11-27 03:52:12] 2025-11-27 08:50:48,917 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:52:12] 2025-11-27 08:50:48,917 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:52:12] 2025-11-27 08:50:49,481 | INFO     | all data control threads have been joined
[2025-11-27 03:52:12] 2025-11-27 08:50:49,646 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:52:12] 2025-11-27 08:50:49,646 | INFO     | aborting loop
[2025-11-27 03:52:12] 2025-11-27 08:50:49,836 | INFO     | all payload control threads have been joined
[2025-11-27 03:52:12] 2025-11-27 08:50:49,926 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:50,017 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:50,038 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:52:12] 2025-11-27 08:50:50,150 | INFO     | all job control threads have been joined
[2025-11-27 03:52:12] 2025-11-27 08:50:50,233 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:50,292 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:50,488 | INFO     | [data] control thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:50,652 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:50,717 | INFO     | [job] validate thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:50,772 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:52:12] 2025-11-27 08:50:50,842 | INFO     | [payload] control thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:50,863 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:50,880 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:50,924 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:51,089 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:51,155 | INFO     | [job] control thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:51,237 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:51,778 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:50:54,049 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:52:12] 2025-11-27 08:51:20,071 | INFO     | PID=65166 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 03:52:12] 2025-11-27 08:51:20,071 | INFO     | .. there are 88 such processes running
[2025-11-27 03:52:12] 2025-11-27 08:51:20,072 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:52:12] 2025-11-27 08:51:20,072 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:52:12] 2025-11-27 08:51:20,072 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:52:12] 2025-11-27 08:51:34,372 [wrapper] supervise_pilot (15 min periods counter: 47)
[2025-11-27 03:52:12] 2025-11-27 08:51:45,133 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:52:12] 2025-11-27 08:51:46,016 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140595006428992)>', '<ExcThread(monitor, started 140594009601792)>']
[2025-11-27 03:52:12] 2025-11-27 08:51:46,275 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:52:12] 2025-11-27 08:51:46,275 | INFO     | [monitor] control thread has ended
[2025-11-27 03:52:12] 2025-11-27 08:51:51,043 | INFO     | all workflow threads have been joined
[2025-11-27 03:52:12] 2025-11-27 08:51:51,043 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:52:12] 2025-11-27 08:51:51,043 | INFO     | traces error code: 0
[2025-11-27 03:52:12] 2025-11-27 08:51:51,043 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:52:12] 2025-11-27 08:51:51,386 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:52:12] 2025-11-27 08:51:51,389 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:52:12] 2025-11-27 08:51:51,400 [wrapper] pilotpid: 65166
[2025-11-27 03:52:12] 2025-11-27 08:51:51,403 [wrapper] Pilot exit status: 0
[2025-11-27 03:52:12] 2025-11-27 08:51:51,417 [wrapper] pandaids: 6896766806
[2025-11-27 03:52:12] 2025-11-27 08:51:51,753 [wrapper] cleanup supervisor_pilot 2295709 65167
[2025-11-27 03:52:12] 2025-11-27 08:51:51,820 [wrapper] Test setup, not cleaning
[2025-11-27 03:52:12] 2025-11-27 08:51:51,867 [wrapper] apfmon messages muted
[2025-11-27 03:52:12] 2025-11-27 08:51:51,900 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:52:12] 2025-11-27 08:51:51,937 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:52:12]  *** Error codes and diagnostics ***
[2025-11-27 03:52:12]     "exeErrorCode": 0,
[2025-11-27 03:52:12]     "exeErrorDiag": "",
[2025-11-27 03:52:12]     "pilotErrorCode": 0,
[2025-11-27 03:52:12]     "pilotErrorDiag": "",
[2025-11-27 03:52:12]  *** Listing of results directory ***
[2025-11-27 03:52:12] total 1314764
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 04:44 pilot3.tar.gz
[2025-11-27 03:52:12] -rwx------. 1 boincer umatlas     36292 Nov 25 05:08 runpilot2-wrapper.sh
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 05:08 queuedata.json
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:52:12] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:21 run_atlas
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:21 job.xml
[2025-11-27 03:52:12] -rw-r--r--. 2 boincer umatlas 411150992 Nov 26 16:21 EVNT.47483658._004282.pool.root.1
[2025-11-27 03:52:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:21 start_atlas.sh
[2025-11-27 03:52:12] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:21 shared
[2025-11-27 03:52:12] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 16:21 input.tar.gz
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:21 boinc_lockfile
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 16:21 pandaJob.out
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas        57 Nov 26 16:21 setup.sh.local
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas    991538 Nov 26 16:21 agis_schedconf.cvmfs.json
[2025-11-27 03:52:12] drwx------. 5 boincer umatlas      4096 Nov 26 16:21 pilot3
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas       533 Nov 27 03:32 boinc_task_state.xml
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 03:49 init_data.xml
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas 916339057 Nov 27 03:49 HITS.47556185._000460.pool.root.1
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas      1070 Nov 27 03:50 memory_monitor_summary.json
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:50 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas   1921144 Nov 27 03:50 log.47556185._000460.job.log.tgz.1
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas      8624 Nov 27 03:50 heartbeat.json
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas        95 Nov 27 03:51 pilot_heartbeat.json
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas      4823 Nov 27 03:51 pilotlog.txt
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas   5535987 Nov 27 03:51 log.47556185._000460.job.log.1
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas       353 Nov 27 03:51 output.list
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:51 runtime_log
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas   7475200 Nov 27 03:51 result.tar.gz
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 03:51 runtime_log.err
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas       663 Nov 27 03:51 MxxMDmd94h8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmoPJKDmDonlGm.diag
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:52 wrapper_checkpoint.txt
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:52 boinc_mmap_file
[2025-11-27 03:52:12] -rw-r--r--. 1 boincer umatlas     12374 Nov 27 03:52 stderr.txt
[2025-11-27 03:52:12] HITS file was successfully produced:
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas 916339057 Nov 27 03:49 shared/HITS.pool.root.1
[2025-11-27 03:52:12]  *** Contents of shared directory: ***
[2025-11-27 03:52:12] total 1304284
[2025-11-27 03:52:12] -rw-r--r--. 2 boincer umatlas 411150992 Nov 26 16:21 ATLAS.root_0
[2025-11-27 03:52:12] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:21 start_atlas.sh
[2025-11-27 03:52:12] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 16:21 input.tar.gz
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas 916339057 Nov 27 03:49 HITS.pool.root.1
[2025-11-27 03:52:12] -rw-------. 1 boincer umatlas   7475200 Nov 27 03:51 result.tar.gz
03:52:13 (57842): run_atlas exited; CPU time 205401.352993
03:52:13 (57842): called boinc_finish(0)

</stderr_txt>
]]>

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