Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:36:26 (15585): wrapper (7.7.26015): starting
01:36:26 (15585): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:36:26] Arguments: --nthreads 8
[2025-11-27 01:36:26] Threads: 8
[2025-11-27 01:36:26] Checking for CVMFS
[2025-11-27 01:36:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:36:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:36:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:36:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:36:26] 2.11.0.0 4363 66007 90840 153341 3 90 3012667 4096001 3276 130560 2 4125001 99.579 3402067 423 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-11-27 01:36:26] CVMFS is ok
[2025-11-27 01:36:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:36:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:36:26] Further information can be found at the LHC@home message board.
[2025-11-27 01:36:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:36:26] Checking for apptainer binary...
[2025-11-27 01:36:26] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-11-27 01:36:26] apptainer is not installed, using version from CVMFS
[2025-11-27 01:36:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:36:26] WARNING: Environment variable TMPDIR already has value [/tmp/job_10928087/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node197
[2025-11-27 01:36:26] apptainer works
[2025-11-27 01:36:26] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:36:26] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:36:26] Starting ATLAS job with PandaID=6895356229
[2025-11-27 01:36:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10928087/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:03:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:03:04] 2025-11-27 05:02:17,589 | INFO     | time since job start (15946s) is within the limit (172800.0s)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,595 | INFO     | time since job start (15948s) is within the limit (172800.0s)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,725 | INFO     | monitor loop #1161: job 0:6895356229 is in state 'finished'
[2025-11-27 06:03:04] 2025-11-27 05:02:19,726 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,777 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 06:03:04] 2025-11-27 05:02:19,793 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2787.0095
[2025-11-27 06:03:04] 2025-11-27 05:02:19,798 | INFO     | using path: /tmp/job_10928087/atlas/pilot/slots/0/PanDA_Pilot-6895356229/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,799 | INFO     | extracted standard info from prmon json
[2025-11-27 06:03:04] 2025-11-27 05:02:19,799 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:03:04] 2025-11-27 05:02:19,799 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:03:04] 2025-11-27 05:02:19,801 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:03:04] 2025-11-27 05:02:19,801 | INFO     | sum of square deviations: 5513070810.0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,802 | INFO     | sum of deviations: 147892953101.00003
[2025-11-27 06:03:04] 2025-11-27 05:02:19,802 | INFO     | mean x: 1764211739.0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,802 | INFO     | mean y: 2910907.5938697318
[2025-11-27 06:03:04] 2025-11-27 05:02:19,803 | INFO     | intersect: -47323614175.83068
[2025-11-27 06:03:04] 2025-11-27 05:02:19,803 | INFO     | chi2: 2.2730386598217285
[2025-11-27 06:03:04] 2025-11-27 05:02:19,803 | INFO     | sum of square deviations: 5202255680.0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,804 | INFO     | sum of deviations: 175533586854.5
[2025-11-27 06:03:04] 2025-11-27 05:02:19,804 | INFO     | mean x: 1764211586.5
[2025-11-27 06:03:04] 2025-11-27 05:02:19,804 | INFO     | mean y: 2924294.53515625
[2025-11-27 06:03:04] 2025-11-27 05:02:19,804 | INFO     | intersect: -59524789604.48893
[2025-11-27 06:03:04] 2025-11-27 05:02:19,804 | INFO     | chi2: 1.4611296206481772
[2025-11-27 06:03:04] 2025-11-27 05:02:19,804 | INFO     | current chi2=1.4611296206481772 (change=35.7191038377336 %)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,804 | INFO     | sum of square deviations: 4903347750.0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,805 | INFO     | sum of deviations: 169530707547.0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,805 | INFO     | mean x: 1764211434.0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,805 | INFO     | mean y: 2921232.231075697
[2025-11-27 06:03:04] 2025-11-27 05:02:19,805 | INFO     | intersect: -60993774885.952156
[2025-11-27 06:03:04] 2025-11-27 05:02:19,806 | INFO     | chi2: 1.4577770099858025
[2025-11-27 06:03:04] 2025-11-27 05:02:19,806 | INFO     | current chi2=1.4577770099858025 (change=0.22945333630889123 %)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,806 | INFO     | right removable region: 250
[2025-11-27 06:03:04] 2025-11-27 05:02:19,806 | INFO     | sum of square deviations: 5202255680.0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,807 | INFO     | sum of deviations: 97618785956.5
[2025-11-27 06:03:04] 2025-11-27 05:02:19,807 | INFO     | mean x: 1764211891.5
[2025-11-27 06:03:04] 2025-11-27 05:02:19,807 | INFO     | mean y: 2935392.19921875
[2025-11-27 06:03:04] 2025-11-27 05:02:19,807 | INFO     | intersect: -33101977863.09286
[2025-11-27 06:03:04] 2025-11-27 05:02:19,807 | INFO     | chi2: 0.8752934612083481
[2025-11-27 06:03:04] 2025-11-27 05:02:19,807 | INFO     | current chi2=0.8752934612083481 (change=61.49236365047147 %)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,807 | INFO     | sum of square deviations: 4903347750.0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,808 | INFO     | sum of deviations: 84146904511.00002
[2025-11-27 06:03:04] 2025-11-27 05:02:19,808 | INFO     | mean x: 1764212044.0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,808 | INFO     | mean y: 2942259.498007968
[2025-11-27 06:03:04] 2025-11-27 05:02:19,808 | INFO     | intersect: -30272899873.792282
[2025-11-27 06:03:04] 2025-11-27 05:02:19,808 | INFO     | chi2: 0.8519547405152966
[2025-11-27 06:03:04] 2025-11-27 05:02:19,808 | INFO     | current chi2=0.8519547405152966 (change=2.6663881003786067 %)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,809 | INFO     | left removable region: 20
[2025-11-27 06:03:04] 2025-11-27 05:02:19,809 | INFO     | sum of square deviations: 3772712597.5
[2025-11-27 06:03:04] 2025-11-27 05:02:19,809 | INFO     | sum of deviations: 86754607144.49997
[2025-11-27 06:03:04] 2025-11-27 05:02:19,809 | INFO     | mean x: 1764212013.5
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | mean y: 2965518.665217391
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | intersect: -40565595217.24168
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | chi2: 0.020296274158117304
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | current memory leak: 23.00 B/s (using 230 data points, chi2=0.02)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | could have reported an average CPU frequency of 3015 MHz (12 samples)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | ..............................
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | . Timing measurements:
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | . get job = 0 s
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | . initial setup = 1 s
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | . payload setup = 2 s
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | . stage-in = 0 s
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | . payload execution = 15919 s
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | . stage-out = 1 s
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | . log creation = 0 s
[2025-11-27 06:03:04] 2025-11-27 05:02:19,810 | INFO     | ..............................
[2025-11-27 06:03:04] 2025-11-27 05:02:19,858 | INFO     | 
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | job summary report
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | --------------------------------------------------
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | PanDA job id: 6895356229
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | task id: 47556149
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | errors: (none)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | pilot state: finished 
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | transexitcode: 0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | exeerrorcode: 0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | exeerrordiag: 
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | exitcode: 0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | exitmsg: OK
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | cpuconsumptiontime: 120661 s
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | nevents: 1000
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | neventsw: 0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | pid: 26052
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | pgrp: 26052
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | corecount: 8
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | event service: False
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | sizes: {0: 2284051, 1: 2284417, 3: 2284679, 11: 2284707, 15925: 2317012, 15927: 2326036, 15930: 2326248, 15936: 2326494}
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | --------------------------------------------------
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | 
[2025-11-27 06:03:04] 2025-11-27 05:02:19,859 | INFO     | executing command: ls -lF /tmp/job_10928087/atlas/pilot/slots/0
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,869 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,870 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,870 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,870 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,870 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,870 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:03:04] 2025-11-27 05:02:19,870 | INFO     | job 6895356229 has completed (purged errors)
[2025-11-27 06:03:04] 2025-11-27 05:02:19,870 | INFO     | overall cleanup function is called
[2025-11-27 06:03:04] 2025-11-27 05:02:20,877 | INFO     | --- collectZombieJob: --- 10, [26052]
[2025-11-27 06:03:04] 2025-11-27 05:02:20,877 | INFO     | zombie collector waiting for pid 26052
[2025-11-27 06:03:04] 2025-11-27 05:02:20,877 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:03:04] 2025-11-27 05:02:20,877 | INFO     | collected zombie processes
[2025-11-27 06:03:04] 2025-11-27 05:02:20,877 | INFO     | will attempt to kill all subprocesses of pid=26052
[2025-11-27 06:03:04] 2025-11-27 05:02:20,993 | INFO     | process IDs to be killed: [26052] (in reverse order)
[2025-11-27 06:03:04] 2025-11-27 05:02:21,037 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:03:04] 2025-11-27 05:02:21,037 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:03:04] 2025-11-27 05:02:21,041 | INFO     | did not find any defunct processes belonging to 26052
[2025-11-27 06:03:04] 2025-11-27 05:02:21,045 | INFO     | did not find any defunct processes belonging to 26052
[2025-11-27 06:03:04] 2025-11-27 05:02:21,045 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:03:04] 2025-11-27 05:02:21,045 | INFO     | ready for new job
[2025-11-27 06:03:04] 2025-11-27 05:02:21,045 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:03:04] 2025-11-27 05:02:21,046 | INFO     | ***************************************
[2025-11-27 06:03:04] 2025-11-27 05:02:21,046 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:03:04] 2025-11-27 05:02:21,046 | INFO     | ***************************************
[2025-11-27 06:03:04] 2025-11-27 05:02:21,046 | INFO     | 
[2025-11-27 06:03:04] 2025-11-27 05:02:21,061 | INFO     | architecture information:
[2025-11-27 06:03:04] 2025-11-27 05:02:21,061 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:03:04] 2025-11-27 05:02:21,067 | INFO     | cat /etc/os-release:
[2025-11-27 06:03:04] NAME="CentOS Linux"
[2025-11-27 06:03:04] VERSION="7 (Core)"
[2025-11-27 06:03:04] ID="centos"
[2025-11-27 06:03:04] ID_LIKE="rhel fedora"
[2025-11-27 06:03:04] VERSION_ID="7"
[2025-11-27 06:03:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:03:04] ANSI_COLOR="0;31"
[2025-11-27 06:03:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:03:04] HOME_URL="https://www.centos.org/"
[2025-11-27 06:03:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:03:04] 
[2025-11-27 06:03:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:03:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:03:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:03:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:03:04] 
[2025-11-27 06:03:04] 2025-11-27 05:02:21,067 | INFO     | ***************************************
[2025-11-27 06:03:04] 2025-11-27 05:02:21,570 | INFO     | executing command: df -mP /tmp/job_10928087/atlas/pilot/slots/0
[2025-11-27 06:03:04] 2025-11-27 05:02:21,576 | INFO     | sufficient remaining disk space (214360391680 B)
[2025-11-27 06:03:04] 2025-11-27 05:02:21,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:03:04] 2025-11-27 05:02:21,577 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:03:04] 2025-11-27 05:02:21,577 | INFO     | update_server=False
[2025-11-27 06:03:04] 2025-11-27 05:02:21,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:03:04] 2025-11-27 05:02:21,577 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 06:03:04] 2025-11-27 05:02:21,577 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:03:04] 2025-11-27 05:02:21,577 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:03:04] 2025-11-27 05:02:21,577 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:03:04] 2025-11-27 05:02:21,577 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:03:04] 2025-11-27 05:02:21,577 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:03:04] 2025-11-27 05:02:21,577 | INFO     | aborting loop
[2025-11-27 06:03:04] 2025-11-27 05:02:22,053 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:03:04] 2025-11-27 05:02:22,258 | INFO     | all data control threads have been joined
[2025-11-27 06:03:04] 2025-11-27 05:02:22,570 | INFO     | all job control threads have been joined
[2025-11-27 06:03:04] 2025-11-27 05:02:22,582 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:22,582 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:22,583 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:22,589 | INFO     | all payload control threads have been joined
[2025-11-27 06:03:04] 2025-11-27 05:02:22,760 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:23,235 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:23,262 | INFO     | [data] control thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:23,408 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:23,420 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:23,575 | INFO     | [job] control thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:23,594 | INFO     | [payload] control thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:23,696 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:23,758 | INFO     | [job] validate thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:23,872 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:23,886 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:24,058 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:24,246 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:03:04] 2025-11-27 05:02:28,251 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:03:04] 2025-11-27 05:02:57,578 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:03:04] 2025-11-27 05:02:59,407 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2025-11-27 06:03:04] 2025-11-27 05:02:59,758 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:03:04] 2025-11-27 05:02:59,758 | INFO     | [monitor] control thread has ended
[2025-11-27 06:03:04] 2025-11-27 05:03:04,432 | INFO     | all workflow threads have been joined
[2025-11-27 06:03:04] 2025-11-27 05:03:04,433 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:03:04] 2025-11-27 05:03:04,433 | INFO     | traces error code: 0
[2025-11-27 06:03:04] 2025-11-27 05:03:04,433 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:03:04] 2025-11-27 05:03:04,483 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:03:04] 2025-11-27 05:03:04,485 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:03:04] 2025-11-27 05:03:04,486 [wrapper] pilotpid: 19420
[2025-11-27 06:03:04] 2025-11-27 05:03:04,487 [wrapper] Pilot exit status: 0
[2025-11-27 06:03:04] 2025-11-27 05:03:04,491 [wrapper] pandaids: 6895356229
[2025-11-27 06:03:04] 2025-11-27 05:03:04,517 [wrapper] cleanup supervisor_pilot  8564 19421
[2025-11-27 06:03:04] 2025-11-27 05:03:04,518 [wrapper] Test setup, not cleaning
[2025-11-27 06:03:04] 2025-11-27 05:03:04,520 [wrapper] apfmon messages muted
[2025-11-27 06:03:04] 2025-11-27 05:03:04,521 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:03:04] 2025-11-27 05:03:04,522 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:03:04]  *** Error codes and diagnostics ***
[2025-11-27 06:03:04]     "exeErrorCode": 0,
[2025-11-27 06:03:04]     "exeErrorDiag": "",
[2025-11-27 06:03:04]     "pilotErrorCode": 0,
[2025-11-27 06:03:04]     "pilotErrorDiag": "",
[2025-11-27 06:03:04]  *** Listing of results directory ***
[2025-11-27 06:03:04] total 1305252
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user    576529 Nov 23 11:16 pilot3.tar.gz
[2025-11-27 06:03:04] -rwx------ 1 mf493845 unix-user     36292 Nov 23 11:44 runpilot2-wrapper.sh
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user      5112 Nov 23 11:44 queuedata.json
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user       100 Nov 26 23:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:03:04] -rwxr-xr-x 1 mf493845 unix-user      7986 Nov 26 23:51 run_atlas
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user       105 Nov 26 23:51 job.xml
[2025-11-27 06:03:04] -rw-r--r-- 2 mf493845 unix-user 410714328 Nov 27 01:36 EVNT.47483658._001153.pool.root.1
[2025-11-27 06:03:04] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 27 01:36 start_atlas.sh
[2025-11-27 06:03:04] drwxrwx--x 2 mf493845 unix-user       100 Nov 27 01:36 shared
[2025-11-27 06:03:04] -rw-r--r-- 2 mf493845 unix-user    590097 Nov 27 01:36 input.tar.gz
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user      6392 Nov 27 01:36 init_data.xml
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user         0 Nov 27 01:36 boinc_setup_complete
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user      8192 Nov 27 01:36 boinc_mmap_file
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user         0 Nov 27 01:36 boinc_lockfile
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user      2784 Nov 27 01:36 pandaJob.out
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user    991546 Nov 27 01:36 agis_schedconf.cvmfs.json
[2025-11-27 06:03:04] drwx------ 5 mf493845 unix-user       440 Nov 27 01:36 pilot3
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user        95 Nov 27 06:01 pilot_heartbeat.json
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user 914242422 Nov 27 06:01 HITS.47556149._001392.pool.root.1
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user      1023 Nov 27 06:02 memory_monitor_summary.json
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user   1516240 Nov 27 06:02 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user   1559259 Nov 27 06:02 log.47556149._001392.job.log.tgz.1
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user      8571 Nov 27 06:02 heartbeat.json
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user      4566 Nov 27 06:03 pilotlog.txt
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user   2306874 Nov 27 06:03 log.47556149._001392.job.log.1
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user       353 Nov 27 06:03 output.list
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user       620 Nov 27 06:03 runtime_log
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user   3880960 Nov 27 06:03 result.tar.gz
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user      9221 Nov 27 06:03 runtime_log.err
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user       649 Nov 27 06:03 6U1MDm2kMh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPVIKDm33TnWn.diag
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user     21657 Nov 27 06:03 stderr.txt
[2025-11-27 06:03:04] HITS file was successfully produced:
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user 914242422 Nov 27 06:01 shared/HITS.pool.root.1
[2025-11-27 06:03:04]  *** Contents of shared directory: ***
[2025-11-27 06:03:04] total 1298296
[2025-11-27 06:03:04] -rw-r--r-- 2 mf493845 unix-user 410714328 Nov 27 01:36 ATLAS.root_0
[2025-11-27 06:03:04] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 27 01:36 start_atlas.sh
[2025-11-27 06:03:04] -rw-r--r-- 2 mf493845 unix-user    590097 Nov 27 01:36 input.tar.gz
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user 914242422 Nov 27 06:01 HITS.pool.root.1
[2025-11-27 06:03:04] -rw------- 1 mf493845 unix-user   3880960 Nov 27 06:03 result.tar.gz
06:03:06 (15585): run_atlas exited; CPU time 120870.237839
06:03:06 (15585): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN