Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:49:50 (306): wrapper (7.7.26015): starting
15:49:50 (306): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 15:49:50] Arguments: --nthreads 8
[2025-11-26 15:49:50] Threads: 8
[2025-11-26 15:49:50] Checking for CVMFS
[2025-11-26 15:49:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 15:49:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 15:49:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 15:49:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 15:49:51] 2.11.2.0 2918 142987 87272 153334 2 81 18652877 20275200 1 130560 0 53465282 99.935 6504997 35196 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 15:49:51] CVMFS is ok
[2025-11-26 15:49:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 15:49:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 15:49:51] Further information can be found at the LHC@home message board.
[2025-11-26 15:49:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 15:49:51] Checking for apptainer binary...
[2025-11-26 15:49:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 15:49:51] Running /usr/bin/apptainer --version
[2025-11-26 15:49:51] apptainer version 1.3.2-1.el7
[2025-11-26 15:49:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 15:49:52] c-115-8.aglt2.org
[2025-11-26 15:49:52] apptainer works
[2025-11-26 15:49:52] Set ATHENA_PROC_NUMBER=8
[2025-11-26 15:49:52] Set ATHENA_CORE_NUMBER=8
[2025-11-26 15:49:52] Starting ATLAS job with PandaID=6896765990
[2025-11-26 15:49:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:09:23]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:09:23] 2025-11-27 08:08:33,988 | INFO     | monitor loop #3001: job 0:6896765990 is in state 'finished'
[2025-11-27 03:09:23] 2025-11-27 08:08:33,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:09:23] 2025-11-27 08:08:34,956 | INFO     | time since job start (40704s) is within the limit (172800.0s)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,402 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 03:09:23] 2025-11-27 08:08:36,406 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-11-27 03:09:23] 2025-11-27 08:08:36,408 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896765990/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,409 | INFO     | extracted standard info from prmon json
[2025-11-27 03:09:23] 2025-11-27 08:08:36,409 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:09:23] 2025-11-27 08:08:36,409 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:09:23] 2025-11-27 08:08:36,421 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:09:23] 2025-11-27 08:08:36,421 | INFO     | sum of square deviations: 92014326169.0074
[2025-11-27 03:09:23] 2025-11-27 08:08:36,430 | INFO     | sum of deviations: 641060038948.5536
[2025-11-27 03:09:23] 2025-11-27 08:08:36,431 | INFO     | mean x: 1764210555.6326838
[2025-11-27 03:09:23] 2025-11-27 08:08:36,431 | INFO     | mean y: 3150294.892053973
[2025-11-27 03:09:23] 2025-11-27 08:08:36,431 | INFO     | intersect: -12288032334.974049
[2025-11-27 03:09:23] 2025-11-27 08:08:36,432 | INFO     | chi2: 5.858039899852415
[2025-11-27 03:09:23] 2025-11-27 08:08:36,433 | INFO     | sum of square deviations: 89960639624.4909
[2025-11-27 03:09:23] 2025-11-27 08:08:36,442 | INFO     | sum of deviations: 868585653156.1023
[2025-11-27 03:09:23] 2025-11-27 08:08:36,443 | INFO     | mean x: 1764210403.1374621
[2025-11-27 03:09:23] 2025-11-27 08:08:36,443 | INFO     | mean y: 3167183.108761329
[2025-11-27 03:09:23] 2025-11-27 08:08:36,443 | INFO     | intersect: -17030591710.895044
[2025-11-27 03:09:23] 2025-11-27 08:08:36,444 | INFO     | chi2: 3.083169295733832
[2025-11-27 03:09:23] 2025-11-27 08:08:36,444 | INFO     | current chi2=3.083169295733832 (change=47.368584911627046 %)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,444 | INFO     | sum of square deviations: 87937704217.22667
[2025-11-27 03:09:23] 2025-11-27 08:08:36,454 | INFO     | sum of deviations: 950939624257.0333
[2025-11-27 03:09:23] 2025-11-27 08:08:36,454 | INFO     | mean x: 1764210250.6407914
[2025-11-27 03:09:23] 2025-11-27 08:08:36,454 | INFO     | mean y: 3173374.3942161337
[2025-11-27 03:09:23] 2025-11-27 08:08:36,454 | INFO     | intersect: -19074620932.249893
[2025-11-27 03:09:23] 2025-11-27 08:08:36,455 | INFO     | chi2: 2.4965199835191534
[2025-11-27 03:09:23] 2025-11-27 08:08:36,455 | INFO     | current chi2=2.4965199835191534 (change=19.027476468010455 %)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,455 | INFO     | right removable region: 656
[2025-11-27 03:09:23] 2025-11-27 08:08:36,456 | INFO     | sum of square deviations: 89960422647.76436
[2025-11-27 03:09:23] 2025-11-27 08:08:36,465 | INFO     | sum of deviations: 439336357277.07544
[2025-11-27 03:09:23] 2025-11-27 08:08:36,466 | INFO     | mean x: 1764210708.1359518
[2025-11-27 03:09:23] 2025-11-27 08:08:36,466 | INFO     | mean y: 3165243.110271903
[2025-11-27 03:09:23] 2025-11-27 08:08:36,466 | INFO     | intersect: -8612644722.75054
[2025-11-27 03:09:23] 2025-11-27 08:08:36,467 | INFO     | chi2: 3.4935549136470363
[2025-11-27 03:09:23] 2025-11-27 08:08:36,467 | INFO     | current chi2=3.4935549136470363 (change=40.363074110590276 %)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,467 | INFO     | sum of square deviations: 87937351149.78386
[2025-11-27 03:09:23] 2025-11-27 08:08:36,476 | INFO     | sum of deviations: 402893313652.93695
[2025-11-27 03:09:23] 2025-11-27 08:08:36,477 | INFO     | mean x: 1764210860.6377473
[2025-11-27 03:09:23] 2025-11-27 08:08:36,477 | INFO     | mean y: 3167988.768645358
[2025-11-27 03:09:23] 2025-11-27 08:08:36,477 | INFO     | intersect: -8079731374.59919
[2025-11-27 03:09:23] 2025-11-27 08:08:36,478 | INFO     | chi2: 3.463237008050915
[2025-11-27 03:09:23] 2025-11-27 08:08:36,478 | INFO     | current chi2=3.463237008050915 (change=0.8678239313682778 %)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,478 | INFO     | left removable region: 20
[2025-11-27 03:09:23] 2025-11-27 08:08:36,478 | INFO     | sum of square deviations: 79771788114.10703
[2025-11-27 03:09:23] 2025-11-27 08:08:36,487 | INFO     | sum of deviations: 667500583528.9791
[2025-11-27 03:09:23] 2025-11-27 08:08:36,487 | INFO     | mean x: 1764210830.1477988
[2025-11-27 03:09:23] 2025-11-27 08:08:36,487 | INFO     | mean y: 3194860.2342767296
[2025-11-27 03:09:23] 2025-11-27 08:08:36,487 | INFO     | intersect: -14759063657.868927
[2025-11-27 03:09:23] 2025-11-27 08:08:36,488 | INFO     | chi2: 0.06852631887264597
[2025-11-27 03:09:23] 2025-11-27 08:08:36,488 | INFO     | current memory leak: 8.37 B/s (using 636 data points, chi2=0.07)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,488 | INFO     | could have reported an average CPU frequency of 2401 MHz (26 samples)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,488 | INFO     | ..............................
[2025-11-27 03:09:23] 2025-11-27 08:08:36,489 | INFO     | . Timing measurements:
[2025-11-27 03:09:23] 2025-11-27 08:08:36,489 | INFO     | . get job = 0 s
[2025-11-27 03:09:23] 2025-11-27 08:08:36,489 | INFO     | . initial setup = 2 s
[2025-11-27 03:09:23] 2025-11-27 08:08:36,489 | INFO     | . payload setup = 8 s
[2025-11-27 03:09:23] 2025-11-27 08:08:36,489 | INFO     | . stage-in = 0 s
[2025-11-27 03:09:23] 2025-11-27 08:08:36,489 | INFO     | . payload execution = 40663 s
[2025-11-27 03:09:23] 2025-11-27 08:08:36,489 | INFO     | . stage-out = 3 s
[2025-11-27 03:09:23] 2025-11-27 08:08:36,489 | INFO     | . log creation = 0 s
[2025-11-27 03:09:23] 2025-11-27 08:08:36,489 | INFO     | ..............................
[2025-11-27 03:09:23] 2025-11-27 08:08:36,576 | INFO     | 
[2025-11-27 03:09:23] 2025-11-27 08:08:36,577 | INFO     | job summary report
[2025-11-27 03:09:23] 2025-11-27 08:08:36,577 | INFO     | --------------------------------------------------
[2025-11-27 03:09:23] 2025-11-27 08:08:36,577 | INFO     | PanDA job id: 6896765990
[2025-11-27 03:09:23] 2025-11-27 08:08:36,577 | INFO     | task id: 47556185
[2025-11-27 03:09:23] 2025-11-27 08:08:36,577 | INFO     | errors: (none)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,577 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:09:23] 2025-11-27 08:08:36,577 | INFO     | pilot state: finished 
[2025-11-27 03:09:23] 2025-11-27 08:08:36,577 | INFO     | transexitcode: 0
[2025-11-27 03:09:23] 2025-11-27 08:08:36,577 | INFO     | exeerrorcode: 0
[2025-11-27 03:09:23] 2025-11-27 08:08:36,578 | INFO     | exeerrordiag: 
[2025-11-27 03:09:23] 2025-11-27 08:08:36,578 | INFO     | exitcode: 0
[2025-11-27 03:09:23] 2025-11-27 08:08:36,578 | INFO     | exitmsg: OK
[2025-11-27 03:09:23] 2025-11-27 08:08:36,578 | INFO     | cpuconsumptiontime: 315971 s
[2025-11-27 03:09:23] 2025-11-27 08:08:36,578 | INFO     | nevents: 1000
[2025-11-27 03:09:23] 2025-11-27 08:08:36,578 | INFO     | neventsw: 0
[2025-11-27 03:09:23] 2025-11-27 08:08:36,578 | INFO     | pid: 11667
[2025-11-27 03:09:23] 2025-11-27 08:08:36,578 | INFO     | pgrp: 11667
[2025-11-27 03:09:23] 2025-11-27 08:08:36,579 | INFO     | corecount: 8
[2025-11-27 03:09:23] 2025-11-27 08:08:36,579 | INFO     | event service: False
[2025-11-27 03:09:23] 2025-11-27 08:08:36,579 | INFO     | sizes: {0: 2284313, 6: 2284575, 11: 2284603, 40676: 2328475, 40679: 2337469, 40683: 2337525, 40689: 2337899}
[2025-11-27 03:09:23] 2025-11-27 08:08:36,579 | INFO     | --------------------------------------------------
[2025-11-27 03:09:23] 2025-11-27 08:08:36,579 | INFO     | 
[2025-11-27 03:09:23] 2025-11-27 08:08:36,579 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 03:09:23] 2025-11-27 08:08:36,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,611 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,611 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,612 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,612 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,612 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,613 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,613 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,613 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,613 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:09:23] 2025-11-27 08:08:36,614 | INFO     | job 6896765990 has completed (purged errors)
[2025-11-27 03:09:23] 2025-11-27 08:08:36,614 | INFO     | overall cleanup function is called
[2025-11-27 03:09:23] 2025-11-27 08:08:37,629 | INFO     | --- collectZombieJob: --- 10, [11667]
[2025-11-27 03:09:23] 2025-11-27 08:08:37,629 | INFO     | zombie collector waiting for pid 11667
[2025-11-27 03:09:23] 2025-11-27 08:08:37,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:09:23] 2025-11-27 08:08:37,630 | INFO     | collected zombie processes
[2025-11-27 03:09:23] 2025-11-27 08:08:37,630 | INFO     | will attempt to kill all subprocesses of pid=11667
[2025-11-27 03:09:23] 2025-11-27 08:08:37,725 | INFO     | process IDs to be killed: [11667] (in reverse order)
[2025-11-27 03:09:23] 2025-11-27 08:08:37,787 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:09:23] 2025-11-27 08:08:37,788 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:09:23] 2025-11-27 08:08:37,793 | INFO     | did not find any defunct processes belonging to 11667
[2025-11-27 03:09:23] 2025-11-27 08:08:37,796 | INFO     | did not find any defunct processes belonging to 11667
[2025-11-27 03:09:23] 2025-11-27 08:08:37,799 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:09:23] 2025-11-27 08:08:37,800 | INFO     | ready for new job
[2025-11-27 03:09:23] 2025-11-27 08:08:37,800 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:09:23] 2025-11-27 08:08:37,804 | INFO     | ***************************************
[2025-11-27 03:09:23] 2025-11-27 08:08:37,804 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:09:23] 2025-11-27 08:08:37,804 | INFO     | ***************************************
[2025-11-27 03:09:23] 2025-11-27 08:08:37,804 | INFO     | 
[2025-11-27 03:09:23] 2025-11-27 08:08:37,805 | INFO     | architecture information:
[2025-11-27 03:09:23] 2025-11-27 08:08:37,806 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:09:23] 2025-11-27 08:08:37,825 | INFO     | cat /etc/os-release:
[2025-11-27 03:09:23] NAME="CentOS Linux"
[2025-11-27 03:09:23] VERSION="7 (Core)"
[2025-11-27 03:09:23] ID="centos"
[2025-11-27 03:09:23] ID_LIKE="rhel fedora"
[2025-11-27 03:09:23] VERSION_ID="7"
[2025-11-27 03:09:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:09:23] ANSI_COLOR="0;31"
[2025-11-27 03:09:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:09:23] HOME_URL="https://www.centos.org/"
[2025-11-27 03:09:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:09:23] 
[2025-11-27 03:09:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:09:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:09:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:09:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:09:23] 
[2025-11-27 03:09:23] 2025-11-27 08:08:37,825 | INFO     | ***************************************
[2025-11-27 03:09:23] 2025-11-27 08:08:38,328 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 03:09:23] 2025-11-27 08:08:38,351 | INFO     | sufficient remaining disk space (17469276160 B)
[2025-11-27 03:09:23] 2025-11-27 08:08:38,351 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:09:23] 2025-11-27 08:08:38,352 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:09:23] 2025-11-27 08:08:38,352 | INFO     | update_server=False
[2025-11-27 03:09:23] 2025-11-27 08:08:38,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:09:23] 2025-11-27 08:08:38,353 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:09:23] 2025-11-27 08:08:38,353 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:09:23] 2025-11-27 08:08:38,354 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:09:23] 2025-11-27 08:08:38,354 | INFO     | aborting loop
[2025-11-27 03:09:23] 2025-11-27 08:08:38,447 | INFO     | all data control threads have been joined
[2025-11-27 03:09:23] 2025-11-27 08:08:38,494 | INFO     | all payload control threads have been joined
[2025-11-27 03:09:23] 2025-11-27 08:08:39,358 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:39,360 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:39,360 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:39,453 | INFO     | [data] control thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:39,488 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:39,500 | INFO     | [payload] control thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:39,544 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:39,620 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:39,915 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:39,954 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:39,960 | INFO     | all job control threads have been joined
[2025-11-27 03:09:23] 2025-11-27 08:08:40,359 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:40,438 | INFO     | [job] validate thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:40,703 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:40,964 | INFO     | [job] control thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:40,978 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:09:23] 2025-11-27 08:08:44,984 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:08:49,210 | INFO     | job.realtimelogging is not enabled
[2025-11-27 03:09:23] 2025-11-27 08:08:50,211 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:09:23] 2025-11-27 08:09:08,173 | INFO     | PID=4751 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-27 03:09:23] 2025-11-27 08:09:08,173 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:09:23] 2025-11-27 08:09:08,173 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:09:23] 2025-11-27 08:09:08,173 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:09:23] 2025-11-27 08:09:17,082 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:09:23] 2025-11-27 08:09:18,133 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660802250560)>', '<ExcThread(monitor, started 140659843397376)>']
[2025-11-27 03:09:23] 2025-11-27 08:09:18,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:09:23] 2025-11-27 08:09:18,223 | INFO     | [monitor] control thread has ended
[2025-11-27 03:09:23] 2025-11-27 08:09:23,144 | INFO     | all workflow threads have been joined
[2025-11-27 03:09:23] 2025-11-27 08:09:23,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:09:23] 2025-11-27 08:09:23,145 | INFO     | traces error code: 0
[2025-11-27 03:09:23] 2025-11-27 08:09:23,146 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:09:23] 2025-11-27 08:09:23,262 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:09:23] 2025-11-27 08:09:23,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:09:23] 2025-11-27 08:09:23,271 [wrapper] pilotpid: 4751
[2025-11-27 03:09:23] 2025-11-27 08:09:23,277 [wrapper] Pilot exit status: 0
[2025-11-27 03:09:23] 2025-11-27 08:09:23,293 [wrapper] pandaids: 6896765990
[2025-11-27 03:09:23] 2025-11-27 08:09:23,345 [wrapper] cleanup supervisor_pilot 20857 4752
[2025-11-27 03:09:23] 2025-11-27 08:09:23,350 [wrapper] Test setup, not cleaning
[2025-11-27 03:09:23] 2025-11-27 08:09:23,355 [wrapper] apfmon messages muted
[2025-11-27 03:09:23] 2025-11-27 08:09:23,359 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:09:23] 2025-11-27 08:09:23,364 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:09:23]  *** Error codes and diagnostics ***
[2025-11-27 03:09:23]     "exeErrorCode": 0,
[2025-11-27 03:09:23]     "exeErrorDiag": "",
[2025-11-27 03:09:23]     "pilotErrorCode": 0,
[2025-11-27 03:09:23]     "pilotErrorDiag": "",
[2025-11-27 03:09:23]  *** Listing of results directory ***
[2025-11-27 03:09:23] total 1318132
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 04:39 pilot3.tar.gz
[2025-11-27 03:09:23] -rwx------ 1 boincer umatlas     36292 Nov 25 04:41 runpilot2-wrapper.sh
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 04:41 queuedata.json
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas       100 Nov 26 15:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:09:23] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 15:49 run_atlas
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas       105 Nov 26 15:49 job.xml
[2025-11-27 03:09:23] -rw-r--r-- 2 boincer umatlas 408036753 Nov 26 15:49 EVNT.47483658._004271.pool.root.1
[2025-11-27 03:09:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 15:49 start_atlas.sh
[2025-11-27 03:09:23] drwxrwx--x 2 boincer umatlas      4096 Nov 26 15:49 shared
[2025-11-27 03:09:23] -rw-r--r-- 2 boincer umatlas    590100 Nov 26 15:49 input.tar.gz
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas         0 Nov 26 15:49 boinc_lockfile
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 15:49 pandaJob.out
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas        57 Nov 26 15:49 setup.sh.local
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas    991538 Nov 26 15:50 agis_schedconf.cvmfs.json
[2025-11-27 03:09:23] drwx------ 5 boincer umatlas      4096 Nov 26 15:50 pilot3
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas       533 Nov 27 02:59 boinc_task_state.xml
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas      5912 Nov 27 03:00 init_data.xml
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas 922732714 Nov 27 03:07 HITS.47556185._000350.pool.root.1
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas      1063 Nov 27 03:08 memory_monitor_summary.json
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas   1516240 Nov 27 03:08 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas   1921178 Nov 27 03:08 log.47556185._000350.job.log.tgz.1
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas        95 Nov 27 03:08 pilot_heartbeat.json
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas      8667 Nov 27 03:08 heartbeat.json
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 03:09 boinc_mmap_file
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas        29 Nov 27 03:09 wrapper_checkpoint.txt
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas      4817 Nov 27 03:09 pilotlog.txt
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas   5613182 Nov 27 03:09 log.47556185._000350.job.log.1
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas       353 Nov 27 03:09 output.list
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas       620 Nov 27 03:09 runtime_log
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas   7557120 Nov 27 03:09 result.tar.gz
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas      9338 Nov 27 03:09 runtime_log.err
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas       667 Nov 27 03:09 50KKDmDj4h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmZIMKDmyTBlkn.diag
[2025-11-27 03:09:23] -rw-r--r-- 1 boincer umatlas     21267 Nov 27 03:09 stderr.txt
[2025-11-27 03:09:23] HITS file was successfully produced:
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas 922732714 Nov 27 03:07 shared/HITS.pool.root.1
[2025-11-27 03:09:23]  *** Contents of shared directory: ***
[2025-11-27 03:09:23] total 1307568
[2025-11-27 03:09:23] -rw-r--r-- 2 boincer umatlas 408036753 Nov 26 15:49 ATLAS.root_0
[2025-11-27 03:09:23] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 15:49 start_atlas.sh
[2025-11-27 03:09:23] -rw-r--r-- 2 boincer umatlas    590100 Nov 26 15:49 input.tar.gz
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas 922732714 Nov 27 03:07 HITS.pool.root.1
[2025-11-27 03:09:23] -rw------- 1 boincer umatlas   7557120 Nov 27 03:09 result.tar.gz
03:09:24 (306): run_atlas exited; CPU time 313845.439173
03:09:24 (306): called boinc_finish(0)

</stderr_txt>
]]>

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