Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:22:27 (4175069): wrapper (7.7.26015): starting
19:22:27 (4175069): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:22:27] Arguments: --nthreads 8
[2025-11-26 19:22:27] Threads: 8
[2025-11-26 19:22:27] Checking for CVMFS
[2025-11-26 19:22:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:22:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:22:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:22:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:22:30] 2.13.3.0 11379 30764 329796 153341 2 155 29662691 32935936 32292 16776704 0 115245974 99.436 161347621 39008 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:22:30] CVMFS is ok
[2025-11-26 19:22:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:22:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:22:30] Further information can be found at the LHC@home message board.
[2025-11-26 19:22:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:22:30] Checking for apptainer binary...
[2025-11-26 19:22:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:22:30] Running /usr/bin/apptainer --version
[2025-11-26 19:22:30] apptainer version 1.4.4-1.el9
[2025-11-26 19:22:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:22:30] c6-4-5-1.aglt2.org
[2025-11-26 19:22:30] apptainer works
[2025-11-26 19:22:30] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:22:30] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:22:31] Starting ATLAS job with PandaID=6891571186
[2025-11-26 19:22:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 14:36:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 14:36:48] 2025-11-27 19:36:13,281 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 14:36:48] 2025-11-27 19:36:13,299 | INFO     | fitting pss+swap vs Time
[2025-11-27 14:36:48] 2025-11-27 19:36:13,301 | INFO     | sum of square deviations: 449784956614.4481
[2025-11-27 14:36:48] 2025-11-27 19:36:13,390 | INFO     | sum of deviations: 2852358127738.738
[2025-11-27 14:36:48] 2025-11-27 19:36:13,390 | INFO     | mean x: 1764237644.9779153
[2025-11-27 14:36:48] 2025-11-27 19:36:13,390 | INFO     | mean y: 2879741.229681979
[2025-11-27 14:36:48] 2025-11-27 19:36:13,391 | INFO     | intersect: -11185216952.339813
[2025-11-27 14:36:48] 2025-11-27 19:36:13,396 | INFO     | chi2: 11.782179101583331
[2025-11-27 14:36:48] 2025-11-27 19:36:13,398 | INFO     | sum of square deviations: 443851532353.4784
[2025-11-27 14:36:48] 2025-11-27 19:36:13,445 | INFO     | sum of deviations: 3264070021938.6763
[2025-11-27 14:36:48] 2025-11-27 19:36:13,445 | INFO     | mean x: 1764237492.484472
[2025-11-27 14:36:48] 2025-11-27 19:36:13,445 | INFO     | mean y: 2890320.381543922
[2025-11-27 14:36:48] 2025-11-27 19:36:13,445 | INFO     | intersect: -12971255967.374754
[2025-11-27 14:36:48] 2025-11-27 19:36:13,447 | INFO     | chi2: 8.155121071997446
[2025-11-27 14:36:48] 2025-11-27 19:36:13,447 | INFO     | current chi2=8.155121071997446 (change=30.784271723542794 %)
[2025-11-27 14:36:48] 2025-11-27 19:36:13,452 | INFO     | sum of square deviations: 437970322052.8492
[2025-11-27 14:36:48] 2025-11-27 19:36:13,495 | INFO     | sum of deviations: 3524482050744.2437
[2025-11-27 14:36:48] 2025-11-27 19:36:13,500 | INFO     | mean x: 1764237339.9884136
[2025-11-27 14:36:48] 2025-11-27 19:36:13,500 | INFO     | mean y: 2897064.2495543673
[2025-11-27 14:36:48] 2025-11-27 19:36:13,500 | INFO     | intersect: -14194464092.3167
[2025-11-27 14:36:48] 2025-11-27 19:36:13,501 | INFO     | chi2: 6.2568950507473815
[2025-11-27 14:36:48] 2025-11-27 19:36:13,501 | INFO     | current chi2=6.2568950507473815 (change=23.276490986357963 %)
[2025-11-27 14:36:48] 2025-11-27 19:36:13,501 | INFO     | right removable region: 1121
[2025-11-27 14:36:48] 2025-11-27 19:36:13,503 | INFO     | sum of square deviations: 443850511823.47833
[2025-11-27 14:36:48] 2025-11-27 19:36:13,549 | INFO     | sum of deviations: 2423594193588.4106
[2025-11-27 14:36:48] 2025-11-27 19:36:13,550 | INFO     | mean x: 1764237797.484472
[2025-11-27 14:36:48] 2025-11-27 19:36:13,550 | INFO     | mean y: 2890756.680567879
[2025-11-27 14:36:48] 2025-11-27 19:36:13,550 | INFO     | intersect: -9630524927.636766
[2025-11-27 14:36:48] 2025-11-27 19:36:13,551 | INFO     | chi2: 8.067971592667059
[2025-11-27 14:36:48] 2025-11-27 19:36:13,555 | INFO     | current chi2=8.067971592667059 (change=31.523943719520815 %)
[2025-11-27 14:36:48] 2025-11-27 19:36:13,557 | INFO     | sum of square deviations: 437968486619.91125
[2025-11-27 14:36:48] 2025-11-27 19:36:13,604 | INFO     | sum of deviations: 2093073042383.4595
[2025-11-27 14:36:48] 2025-11-27 19:36:13,604 | INFO     | mean x: 1764237949.9910874
[2025-11-27 14:36:48] 2025-11-27 19:36:13,604 | INFO     | mean y: 2899321.745989305
[2025-11-27 14:36:48] 2025-11-27 19:36:13,604 | INFO     | intersect: -8428481031.6100645
[2025-11-27 14:36:48] 2025-11-27 19:36:13,606 | INFO     | chi2: 5.919213423774432
[2025-11-27 14:36:48] 2025-11-27 19:36:13,606 | INFO     | current chi2=5.919213423774432 (change=26.633189572031007 %)
[2025-11-27 14:36:48] 2025-11-27 19:36:13,607 | INFO     | sum of square deviations: 432139195865.15076
[2025-11-27 14:36:48] 2025-11-27 19:36:13,653 | INFO     | sum of deviations: 2016757948751.0835
[2025-11-27 14:36:48] 2025-11-27 19:36:13,653 | INFO     | mean x: 1764238102.4905999
[2025-11-27 14:36:48] 2025-11-27 19:36:13,653 | INFO     | mean y: 2901317.7224709042
[2025-11-27 14:36:48] 2025-11-27 19:36:13,653 | INFO     | intersect: -8230652247.267579
[2025-11-27 14:36:48] 2025-11-27 19:36:13,662 | INFO     | chi2: 5.873853515123296
[2025-11-27 14:36:48] 2025-11-27 19:36:13,663 | INFO     | current chi2=5.873853515123296 (change=0.7663164917985327 %)
[2025-11-27 14:36:48] 2025-11-27 19:36:13,663 | INFO     | left removable region: 30
[2025-11-27 14:36:48] 2025-11-27 19:36:13,664 | INFO     | sum of square deviations: 402659353372.6483
[2025-11-27 14:36:48] 2025-11-27 19:36:13,726 | INFO     | sum of deviations: 2572928699190.601
[2025-11-27 14:36:48] 2025-11-27 19:36:13,734 | INFO     | mean x: 1764238224.5096242
[2025-11-27 14:36:48] 2025-11-27 19:36:13,735 | INFO     | mean y: 2922784.752520623
[2025-11-27 14:36:48] 2025-11-27 19:36:13,735 | INFO     | intersect: -11270276563.60322
[2025-11-27 14:36:48] 2025-11-27 19:36:13,736 | INFO     | chi2: 0.20941481965749895
[2025-11-27 14:36:48] 2025-11-27 19:36:13,736 | INFO     | current memory leak: 6.39 B/s (using 1091 data points, chi2=0.21)
[2025-11-27 14:36:48] 2025-11-27 19:36:13,738 | INFO     | could have reported an average CPU frequency of 3014 MHz (41 samples)
[2025-11-27 14:36:48] 2025-11-27 19:36:13,738 | INFO     | ..............................
[2025-11-27 14:36:48] 2025-11-27 19:36:13,738 | INFO     | . Timing measurements:
[2025-11-27 14:36:48] 2025-11-27 19:36:13,738 | INFO     | . get job = 0 s
[2025-11-27 14:36:48] 2025-11-27 19:36:13,738 | INFO     | . initial setup = 4 s
[2025-11-27 14:36:48] 2025-11-27 19:36:13,738 | INFO     | . payload setup = 42 s
[2025-11-27 14:36:48] 2025-11-27 19:36:13,746 | INFO     | . stage-in = 0 s
[2025-11-27 14:36:48] 2025-11-27 19:36:13,747 | INFO     | . payload execution = 69025 s
[2025-11-27 14:36:48] 2025-11-27 19:36:13,747 | INFO     | . stage-out = 7 s
[2025-11-27 14:36:48] 2025-11-27 19:36:13,747 | INFO     | . log creation = 1 s
[2025-11-27 14:36:48] 2025-11-27 19:36:13,747 | INFO     | ..............................
[2025-11-27 14:36:48] 2025-11-27 19:36:13,896 | INFO     | time since job start (69162s) is within the limit (172800.0s)
[2025-11-27 14:36:48] 2025-11-27 19:36:14,074 | INFO     | 
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | job summary report
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | --------------------------------------------------
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | PanDA job id: 6891571186
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | task id: 47493068
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | errors: (none)
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | pilot state: finished 
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | transexitcode: 0
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | exeerrorcode: 0
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | exeerrordiag: 
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | exitcode: 0
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | exitmsg: OK
[2025-11-27 14:36:48] 2025-11-27 19:36:14,075 | INFO     | cpuconsumptiontime: 243218 s
[2025-11-27 14:36:48] 2025-11-27 19:36:14,076 | INFO     | nevents: 1000
[2025-11-27 14:36:48] 2025-11-27 19:36:14,076 | INFO     | neventsw: 0
[2025-11-27 14:36:48] 2025-11-27 19:36:14,076 | INFO     | pid: 10930
[2025-11-27 14:36:48] 2025-11-27 19:36:14,076 | INFO     | pgrp: 10930
[2025-11-27 14:36:48] 2025-11-27 19:36:14,076 | INFO     | corecount: 8
[2025-11-27 14:36:48] 2025-11-27 19:36:14,076 | INFO     | event service: False
[2025-11-27 14:36:48] 2025-11-27 19:36:14,076 | INFO     | sizes: {0: 2284127, 1: 2284155, 2: 2284354, 13: 2284354, 24: 2284410, 29: 2284700, 35: 2284856, 69069: 2341677, 69078: 2350671, 69081: 2350727, 69098: 2351069}
[2025-11-27 14:36:48] 2025-11-27 19:36:14,076 | INFO     | --------------------------------------------------
[2025-11-27 14:36:48] 2025-11-27 19:36:14,076 | INFO     | 
[2025-11-27 14:36:48] 2025-11-27 19:36:14,076 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-11-27 14:36:48] 2025-11-27 19:36:14,124 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,124 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,124 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,124 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,124 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,124 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,124 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,124 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,124 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,124 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | job 6891571186 has completed (purged errors)
[2025-11-27 14:36:48] 2025-11-27 19:36:14,125 | INFO     | overall cleanup function is called
[2025-11-27 14:36:48] 2025-11-27 19:36:15,154 | INFO     | --- collectZombieJob: --- 10, [10930]
[2025-11-27 14:36:48] 2025-11-27 19:36:15,155 | INFO     | zombie collector waiting for pid 10930
[2025-11-27 14:36:48] 2025-11-27 19:36:15,155 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 14:36:48] 2025-11-27 19:36:15,155 | INFO     | collected zombie processes
[2025-11-27 14:36:48] 2025-11-27 19:36:15,155 | INFO     | will attempt to kill all subprocesses of pid=10930
[2025-11-27 14:36:48] 2025-11-27 19:36:16,121 | INFO     | process IDs to be killed: [10930] (in reverse order)
[2025-11-27 14:36:48] 2025-11-27 19:36:16,445 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 14:36:48] 2025-11-27 19:36:16,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 14:36:48] 2025-11-27 19:36:16,473 | INFO     | did not find any defunct processes belonging to 10930
[2025-11-27 14:36:48] 2025-11-27 19:36:16,491 | INFO     | did not find any defunct processes belonging to 10930
[2025-11-27 14:36:48] 2025-11-27 19:36:16,494 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 14:36:48] 2025-11-27 19:36:16,494 | INFO     | ready for new job
[2025-11-27 14:36:48] 2025-11-27 19:36:16,494 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 14:36:48] 2025-11-27 19:36:16,509 | INFO     | ***************************************
[2025-11-27 14:36:48] 2025-11-27 19:36:16,509 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 14:36:48] 2025-11-27 19:36:16,509 | INFO     | ***************************************
[2025-11-27 14:36:48] 2025-11-27 19:36:16,509 | INFO     | 
[2025-11-27 14:36:48] 2025-11-27 19:36:16,516 | INFO     | architecture information:
[2025-11-27 14:36:48] 2025-11-27 19:36:16,518 | INFO     | executing command: cat /etc/os-release
[2025-11-27 14:36:48] 2025-11-27 19:36:16,556 | INFO     | cat /etc/os-release:
[2025-11-27 14:36:48] NAME="CentOS Linux"
[2025-11-27 14:36:48] VERSION="7 (Core)"
[2025-11-27 14:36:48] ID="centos"
[2025-11-27 14:36:48] ID_LIKE="rhel fedora"
[2025-11-27 14:36:48] VERSION_ID="7"
[2025-11-27 14:36:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 14:36:48] ANSI_COLOR="0;31"
[2025-11-27 14:36:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 14:36:48] HOME_URL="https://www.centos.org/"
[2025-11-27 14:36:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 14:36:48] 
[2025-11-27 14:36:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 14:36:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 14:36:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 14:36:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 14:36:48] 
[2025-11-27 14:36:48] 2025-11-27 19:36:16,556 | INFO     | ***************************************
[2025-11-27 14:36:48] 2025-11-27 19:36:17,060 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-11-27 14:36:48] 2025-11-27 19:36:17,173 | INFO     | sufficient remaining disk space (71150075904 B)
[2025-11-27 14:36:48] 2025-11-27 19:36:17,173 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 14:36:48] 2025-11-27 19:36:17,173 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 14:36:48] 2025-11-27 19:36:17,173 | INFO     | update_server=False
[2025-11-27 14:36:48] 2025-11-27 19:36:17,174 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 14:36:48] 2025-11-27 19:36:17,174 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 14:36:48] 2025-11-27 19:36:17,174 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 14:36:48] 2025-11-27 19:36:17,244 | INFO     | all payload control threads have been joined
[2025-11-27 14:36:48] 2025-11-27 19:36:17,495 | INFO     | all data control threads have been joined
[2025-11-27 14:36:48] 2025-11-27 19:36:17,596 | INFO     | all job control threads have been joined
[2025-11-27 14:36:48] 2025-11-27 19:36:17,714 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:36:48] 2025-11-27 19:36:17,715 | INFO     | aborting loop
[2025-11-27 14:36:48] 2025-11-27 19:36:18,180 | INFO     | [job] retrieve thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:18,250 | INFO     | [payload] control thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:18,283 | INFO     | [payload] validate_post thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:18,501 | INFO     | [data] control thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:18,603 | INFO     | [job] control thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:18,664 | INFO     | [data] copytool_in thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:18,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:18,715 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:18,721 | INFO     | [job] job monitor thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:18,778 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:19,059 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 14:36:48] 2025-11-27 19:36:19,111 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:19,180 | INFO     | [data] copytool_out thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:19,640 | INFO     | [job] validate thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:19,644 | INFO     | [payload] failed_post thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:20,065 | INFO     | [job] queue monitor thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:21,182 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 14:36:48] 2025-11-27 19:36:33,219 | INFO     | [monitor] cgroup control has ended
[2025-11-27 14:36:48] 2025-11-27 19:36:34,341 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139759791970112)>', '<ExcThread(monitor, started 139759259195136)>']
[2025-11-27 14:36:48] 2025-11-27 19:36:39,370 | INFO     | all workflow threads have been joined
[2025-11-27 14:36:48] 2025-11-27 19:36:39,371 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 14:36:48] 2025-11-27 19:36:39,371 | INFO     | traces error code: 0
[2025-11-27 14:36:48] 2025-11-27 19:36:39,371 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 14:36:48] 2025-11-27 19:36:47,716 | INFO     | PID=4183668 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 14:36:48] 2025-11-27 19:36:47,716 | INFO     | .. there are 48 such processes running
[2025-11-27 14:36:48] 2025-11-27 19:36:47,717 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 14:36:48] 2025-11-27 19:36:47,717 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 14:36:48] 2025-11-27 19:36:47,717 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 14:36:48] 2025-11-27 19:36:47,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 14:36:48] 2025-11-27 19:36:47,717 | INFO     | [monitor] control thread has ended
[2025-11-27 14:36:48] 2025-11-27 19:36:48,559 [wrapper] ==== pilot stdout END ====
[2025-11-27 14:36:48] 2025-11-27 19:36:48,561 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 14:36:48] 2025-11-27 19:36:48,565 [wrapper] pilotpid: 4183668
[2025-11-27 14:36:48] 2025-11-27 19:36:48,567 [wrapper] Pilot exit status: 0
[2025-11-27 14:36:48] 2025-11-27 19:36:48,580 [wrapper] pandaids: 6891571186
[2025-11-27 14:36:48] 2025-11-27 19:36:48,662 [wrapper] cleanup supervisor_pilot  683148 4183669
[2025-11-27 14:36:48] 2025-11-27 19:36:48,665 [wrapper] Test setup, not cleaning
[2025-11-27 14:36:48] 2025-11-27 19:36:48,668 [wrapper] apfmon messages muted
[2025-11-27 14:36:48] 2025-11-27 19:36:48,670 [wrapper] ==== wrapper stdout END ====
[2025-11-27 14:36:48] 2025-11-27 19:36:48,674 [wrapper] ==== wrapper stderr END ====
[2025-11-27 14:36:48]  *** Error codes and diagnostics ***
[2025-11-27 14:36:48]     "exeErrorCode": 0,
[2025-11-27 14:36:48]     "exeErrorDiag": "",
[2025-11-27 14:36:48]     "pilotErrorCode": 0,
[2025-11-27 14:36:48]     "pilotErrorDiag": "",
[2025-11-27 14:36:48]  *** Listing of results directory ***
[2025-11-27 14:36:48] total 1328568
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:45 queuedata.json
[2025-11-27 14:36:48] -rwx------. 1 boincer umatlas     36292 Nov 18 10:45 runpilot2-wrapper.sh
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 14:36:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:22 run_atlas
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:22 job.xml
[2025-11-27 14:36:48] -rw-r--r--. 2 boincer umatlas 409997099 Nov 26 19:22 EVNT.47493065._000272.pool.root.1
[2025-11-27 14:36:48] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 19:22 start_atlas.sh
[2025-11-27 14:36:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:22 shared
[2025-11-27 14:36:48] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 19:22 input.tar.gz
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:22 boinc_lockfile
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas      2770 Nov 26 19:22 pandaJob.out
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas    991546 Nov 26 19:23 agis_schedconf.cvmfs.json
[2025-11-27 14:36:48] drwx------. 5 boincer umatlas      4096 Nov 26 19:23 pilot3
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas       533 Nov 27 14:22 boinc_task_state.xml
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas 924306240 Nov 27 14:34 HITS.47493068._002711.pool.root.1
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas      1064 Nov 27 14:35 memory_monitor_summary.json
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas   1516240 Nov 27 14:35 agis_ddmendpoints.agis.ALL.json
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas   2243240 Nov 27 14:35 log.47493068._002711.job.log.tgz.1
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas      6877 Nov 27 14:36 init_data.xml
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas      8621 Nov 27 14:36 heartbeat.json
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 14:36 boinc_mmap_file
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas        29 Nov 27 14:36 wrapper_checkpoint.txt
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas        95 Nov 27 14:36 pilot_heartbeat.json
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas       823 Nov 27 14:36 pilotlog.txt
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas   8877349 Nov 27 14:36 log.47493068._002711.job.log.1
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas       353 Nov 27 14:36 output.list
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas       620 Nov 27 14:36 runtime_log
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas  11141120 Nov 27 14:36 result.tar.gz
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas       661 Nov 27 14:36 SQwKDml4cf8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmDPFKDmD9nzXn.diag
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas      8704 Nov 27 14:36 runtime_log.err
[2025-11-27 14:36:48] -rw-r--r--. 1 boincer umatlas     21173 Nov 27 14:36 stderr.txt
[2025-11-27 14:36:48] HITS file was successfully produced:
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas 924306240 Nov 27 14:34 shared/HITS.pool.root.1
[2025-11-27 14:36:48]  *** Contents of shared directory: ***
[2025-11-27 14:36:48] total 1314512
[2025-11-27 14:36:48] -rw-r--r--. 2 boincer umatlas 409997099 Nov 26 19:22 ATLAS.root_0
[2025-11-27 14:36:48] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 19:22 start_atlas.sh
[2025-11-27 14:36:48] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 19:22 input.tar.gz
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas 924306240 Nov 27 14:34 HITS.pool.root.1
[2025-11-27 14:36:48] -rw-------. 1 boincer umatlas  11141120 Nov 27 14:36 result.tar.gz
14:36:50 (4175069): run_atlas exited; CPU time 245216.298903
14:36:50 (4175069): called boinc_finish(0)

</stderr_txt>
]]>

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