Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
20:52:40 (1999454): wrapper (7.7.26015): starting
20:52:40 (1999454): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 20:52:40] Arguments: --nthreads 8
[2025-11-26 20:52:40] Threads: 8
[2025-11-26 20:52:40] Checking for CVMFS
[2025-11-26 20:52:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 20:52:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 20:52:44] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 20:52:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 20:52:44] 2.13.3.0 1999684 0 25544 153334 3 1 3341210 4096000 0 130560 0 0 0.000 1291 1082 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-26 20:52:44] CVMFS is ok
[2025-11-26 20:52:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 20:52:44] Checking for apptainer binary...
[2025-11-26 20:52:44] apptainer is not installed, using version from CVMFS
[2025-11-26 20:52:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 20:52:44] senture-c621e-l
[2025-11-26 20:52:44] apptainer works
[2025-11-26 20:52:44] Set ATHENA_PROC_NUMBER=8
[2025-11-26 20:52:44] Set ATHENA_CORE_NUMBER=8
[2025-11-26 20:52:44] Starting ATLAS job with PandaID=6895351519
[2025-11-26 20:52:44] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:52:54]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:52:54] 2025-11-27 04:51:47,025 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,151 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 04:52:54] 2025-11-27 04:51:48,153 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 2600.0039999999976
[2025-11-27 04:52:54] 2025-11-27 04:51:48,159 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6895351519/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,159 | INFO     | extracted standard info from prmon json
[2025-11-27 04:52:54] 2025-11-27 04:51:48,159 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:52:54] 2025-11-27 04:51:48,159 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:52:54] 2025-11-27 04:51:48,164 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:52:54] 2025-11-27 04:51:48,164 | INFO     | sum of square deviations: 32399635845.239975
[2025-11-27 04:52:54] 2025-11-27 04:51:48,167 | INFO     | sum of deviations: 372892324197.6312
[2025-11-27 04:52:54] 2025-11-27 04:51:48,167 | INFO     | mean x: 1764204739.1995754
[2025-11-27 04:52:54] 2025-11-27 04:51:48,167 | INFO     | mean y: 2841588.152866242
[2025-11-27 04:52:54] 2025-11-27 04:51:48,167 | INFO     | intersect: -20301658397.67816
[2025-11-27 04:52:54] 2025-11-27 04:51:48,167 | INFO     | chi2: 4.576957828932009
[2025-11-27 04:52:54] 2025-11-27 04:51:48,167 | INFO     | sum of square deviations: 31378743047.538544
[2025-11-27 04:52:54] 2025-11-27 04:51:48,170 | INFO     | sum of deviations: 505175974377.4679
[2025-11-27 04:52:54] 2025-11-27 04:51:48,170 | INFO     | mean x: 1764204586.7017167
[2025-11-27 04:52:54] 2025-11-27 04:51:48,170 | INFO     | mean y: 2861304.6652360517
[2025-11-27 04:52:54] 2025-11-27 04:51:48,170 | INFO     | intersect: -28399607517.557045
[2025-11-27 04:52:54] 2025-11-27 04:51:48,170 | INFO     | chi2: 1.953877094986414
[2025-11-27 04:52:54] 2025-11-27 04:51:48,170 | INFO     | current chi2=1.953877094986414 (change=57.31057248036011 %)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,171 | INFO     | sum of square deviations: 30379525074.832886
[2025-11-27 04:52:54] 2025-11-27 04:51:48,173 | INFO     | sum of deviations: 497332620104.6766
[2025-11-27 04:52:54] 2025-11-27 04:51:48,173 | INFO     | mean x: 1764204434.2039046
[2025-11-27 04:52:54] 2025-11-27 04:51:48,173 | INFO     | mean y: 2860104.2906724513
[2025-11-27 04:52:54] 2025-11-27 04:51:48,173 | INFO     | intersect: -28878316000.39347
[2025-11-27 04:52:54] 2025-11-27 04:51:48,173 | INFO     | chi2: 1.9457978582310431
[2025-11-27 04:52:54] 2025-11-27 04:51:48,173 | INFO     | current chi2=1.9457978582310431 (change=0.41349769522872626 %)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,173 | INFO     | right removable region: 460
[2025-11-27 04:52:54] 2025-11-27 04:51:48,174 | INFO     | sum of square deviations: 31378685707.538593
[2025-11-27 04:52:54] 2025-11-27 04:51:48,176 | INFO     | sum of deviations: 264619101952.0428
[2025-11-27 04:52:54] 2025-11-27 04:51:48,176 | INFO     | mean x: 1764204891.7017167
[2025-11-27 04:52:54] 2025-11-27 04:51:48,176 | INFO     | mean y: 2857705.4463519314
[2025-11-27 04:52:54] 2025-11-27 04:51:48,176 | INFO     | intersect: -14874830877.58287
[2025-11-27 04:52:54] 2025-11-27 04:51:48,176 | INFO     | chi2: 2.7763804262546863
[2025-11-27 04:52:54] 2025-11-27 04:51:48,176 | INFO     | current chi2=2.7763804262546863 (change=39.34004790901626 %)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,177 | INFO     | sum of square deviations: 30379410394.832882
[2025-11-27 04:52:54] 2025-11-27 04:51:48,179 | INFO     | sum of deviations: 237696890366.62918
[2025-11-27 04:52:54] 2025-11-27 04:51:48,179 | INFO     | mean x: 1764205044.2039046
[2025-11-27 04:52:54] 2025-11-27 04:51:48,179 | INFO     | mean y: 2861811.2060737526
[2025-11-27 04:52:54] 2025-11-27 04:51:48,179 | INFO     | intersect: -13800765300.915716
[2025-11-27 04:52:54] 2025-11-27 04:51:48,179 | INFO     | chi2: 2.7387757417873155
[2025-11-27 04:52:54] 2025-11-27 04:51:48,179 | INFO     | current chi2=2.7387757417873155 (change=1.3544499922187954 %)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,180 | INFO     | left removable region: 20
[2025-11-27 04:52:54] 2025-11-27 04:51:48,180 | INFO     | sum of square deviations: 26413993946.343113
[2025-11-27 04:52:54] 2025-11-27 04:51:48,182 | INFO     | sum of deviations: 320568975493.9
[2025-11-27 04:52:54] 2025-11-27 04:51:48,182 | INFO     | mean x: 1764205013.7113636
[2025-11-27 04:52:54] 2025-11-27 04:51:48,182 | INFO     | mean y: 2887543.7
[2025-11-27 04:52:54] 2025-11-27 04:51:48,182 | INFO     | intersect: -21408088583.405197
[2025-11-27 04:52:54] 2025-11-27 04:51:48,182 | INFO     | chi2: 0.06252512330252057
[2025-11-27 04:52:54] 2025-11-27 04:51:48,182 | INFO     | current memory leak: 12.14 B/s (using 440 data points, chi2=0.06)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | ..............................
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | . Timing measurements:
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | . get job = 0 s
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | . initial setup = 2 s
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | . payload setup = 4 s
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | . stage-in = 0 s
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | . payload execution = 28694 s
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | . stage-out = 1 s
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | . log creation = 0 s
[2025-11-27 04:52:54] 2025-11-27 04:51:48,183 | INFO     | ..............................
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | 
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | job summary report
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | --------------------------------------------------
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | PanDA job id: 6895351519
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | task id: 47556137
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | errors: (none)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | pilot state: finished 
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | transexitcode: 0
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | exeerrorcode: 0
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | exeerrordiag: 
[2025-11-27 04:52:54] 2025-11-27 04:51:48,228 | INFO     | exitcode: 0
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | exitmsg: OK
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | cpuconsumptiontime: 224475 s
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | nevents: 1000
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | neventsw: 0
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | pid: 2034238
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | pgrp: 2034238
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | corecount: 8
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | event service: False
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | sizes: {0: 2284322, 3: 2284584, 11: 2284612, 28703: 2322382, 28705: 2331390, 28707: 2331446, 28712: 2331820}
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | --------------------------------------------------
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | 
[2025-11-27 04:52:54] 2025-11-27 04:51:48,229 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-27 04:52:54] 2025-11-27 04:51:48,246 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,246 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,246 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,246 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,246 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | job 6895351519 has completed (purged errors)
[2025-11-27 04:52:54] 2025-11-27 04:51:48,247 | INFO     | overall cleanup function is called
[2025-11-27 04:52:54] 2025-11-27 04:51:49,260 | INFO     | --- collectZombieJob: --- 10, [2034238]
[2025-11-27 04:52:54] 2025-11-27 04:51:49,260 | INFO     | zombie collector waiting for pid 2034238
[2025-11-27 04:52:54] 2025-11-27 04:51:49,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:52:54] 2025-11-27 04:51:49,260 | INFO     | collected zombie processes
[2025-11-27 04:52:54] 2025-11-27 04:51:49,260 | INFO     | will attempt to kill all subprocesses of pid=2034238
[2025-11-27 04:52:54] 2025-11-27 04:51:49,430 | INFO     | process IDs to be killed: [2034238] (in reverse order)
[2025-11-27 04:52:54] 2025-11-27 04:51:49,496 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:52:54] 2025-11-27 04:51:49,496 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:52:54] 2025-11-27 04:51:49,501 | INFO     | did not find any defunct processes belonging to 2034238
[2025-11-27 04:52:54] 2025-11-27 04:51:49,505 | INFO     | did not find any defunct processes belonging to 2034238
[2025-11-27 04:52:54] 2025-11-27 04:51:49,506 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:52:54] 2025-11-27 04:51:49,506 | INFO     | ready for new job
[2025-11-27 04:52:54] 2025-11-27 04:51:49,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:52:54] 2025-11-27 04:51:49,509 | INFO     | ***************************************
[2025-11-27 04:52:54] 2025-11-27 04:51:49,509 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:52:54] 2025-11-27 04:51:49,509 | INFO     | ***************************************
[2025-11-27 04:52:54] 2025-11-27 04:51:49,509 | INFO     | 
[2025-11-27 04:52:54] 2025-11-27 04:51:49,511 | INFO     | pilot is running in a VM
[2025-11-27 04:52:54] 2025-11-27 04:51:49,511 | INFO     | architecture information:
[2025-11-27 04:52:54] 2025-11-27 04:51:49,511 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:52:54] 2025-11-27 04:51:49,524 | INFO     | cat /etc/os-release:
[2025-11-27 04:52:54] NAME="CentOS Linux"
[2025-11-27 04:52:54] VERSION="7 (Core)"
[2025-11-27 04:52:54] ID="centos"
[2025-11-27 04:52:54] ID_LIKE="rhel fedora"
[2025-11-27 04:52:54] VERSION_ID="7"
[2025-11-27 04:52:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:52:54] ANSI_COLOR="0;31"
[2025-11-27 04:52:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:52:54] HOME_URL="https://www.centos.org/"
[2025-11-27 04:52:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:52:54] 
[2025-11-27 04:52:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:52:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:52:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:52:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:52:54] 
[2025-11-27 04:52:54] 2025-11-27 04:51:49,525 | INFO     | ***************************************
[2025-11-27 04:52:54] 2025-11-27 04:51:50,027 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-27 04:52:54] 2025-11-27 04:51:50,041 | INFO     | sufficient remaining disk space (104892203008 B)
[2025-11-27 04:52:54] 2025-11-27 04:51:50,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:52:54] 2025-11-27 04:51:50,042 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:52:54] 2025-11-27 04:51:50,042 | INFO     | update_server=False
[2025-11-27 04:52:54] 2025-11-27 04:51:50,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:52:54] 2025-11-27 04:51:50,042 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:52:54] 2025-11-27 04:51:50,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:52:54] 2025-11-27 04:51:50,533 | INFO     | aborting loop
[2025-11-27 04:52:54] 2025-11-27 04:51:50,708 | INFO     | all data control threads have been joined
[2025-11-27 04:52:54] 2025-11-27 04:51:51,047 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:51,047 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:51,271 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:51,286 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:52:54] 2025-11-27 04:51:51,355 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:51,438 | INFO     | all payload control threads have been joined
[2025-11-27 04:52:54] 2025-11-27 04:51:51,487 | INFO     | [job] validate thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:51,538 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:51,713 | INFO     | [data] control thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:51,733 | INFO     | all job control threads have been joined
[2025-11-27 04:52:54] 2025-11-27 04:51:51,936 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:52,016 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:52,219 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:52,231 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:52,443 | INFO     | [payload] control thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:52,738 | INFO     | [job] control thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:53,291 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:51:53,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:52:54] 2025-11-27 04:51:57,505 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:52:00,842 | INFO     | job.realtimelogging is not enabled
[2025-11-27 04:52:54] 2025-11-27 04:52:01,847 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:52:54] 2025-11-27 04:52:19,528 | INFO     | PID=2008001 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:52:54] 2025-11-27 04:52:19,528 | INFO     | .. there are 8 such processes running
[2025-11-27 04:52:54] 2025-11-27 04:52:19,528 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:52:54] 2025-11-27 04:52:19,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:52:54] 2025-11-27 04:52:19,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:52:54] 2025-11-27 04:52:48,858 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:52:54] 2025-11-27 04:52:49,400 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 130215370450752)>', '<ExcThread(monitor, started 130214608758528)>']
[2025-11-27 04:52:54] 2025-11-27 04:52:49,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:52:54] 2025-11-27 04:52:49,682 | INFO     | [monitor] control thread has ended
[2025-11-27 04:52:54] 2025-11-27 04:52:54,425 | INFO     | all workflow threads have been joined
[2025-11-27 04:52:54] 2025-11-27 04:52:54,425 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:52:54] 2025-11-27 04:52:54,426 | INFO     | traces error code: 0
[2025-11-27 04:52:54] 2025-11-27 04:52:54,426 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:52:54] 2025-11-27 04:52:54,518 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:52:54] 2025-11-27 04:52:54,521 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:52:54] 2025-11-27 04:52:54,523 [wrapper] pilotpid: 2008001
[2025-11-27 04:52:54] 2025-11-27 04:52:54,525 [wrapper] Pilot exit status: 0
[2025-11-27 04:52:54] 2025-11-27 04:52:54,532 [wrapper] pandaids: 6895351519
[2025-11-27 04:52:54] 2025-11-27 04:52:54,567 [wrapper] cleanup supervisor_pilot 2434256 2008002
[2025-11-27 04:52:54] 2025-11-27 04:52:54,569 [wrapper] Test setup, not cleaning
[2025-11-27 04:52:54] 2025-11-27 04:52:54,572 [wrapper] apfmon messages muted
[2025-11-27 04:52:54] 2025-11-27 04:52:54,575 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:52:54] 2025-11-27 04:52:54,578 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:52:54]  *** Error codes and diagnostics ***
[2025-11-27 04:52:54]     "exeErrorCode": 0,
[2025-11-27 04:52:54]     "exeErrorDiag": "",
[2025-11-27 04:52:54]     "pilotErrorCode": 0,
[2025-11-27 04:52:54]     "pilotErrorDiag": "",
[2025-11-27 04:52:54]  *** Listing of results directory ***
[2025-11-27 04:52:54] total 1303840
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc    576529 Nov 23 00:28 pilot3.tar.gz
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc      5112 Nov 23 00:48 queuedata.json
[2025-11-27 04:52:54] -rwx------ 1 boinc boinc     36292 Nov 23 00:50 runpilot2-wrapper.sh
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc       100 Nov 26 20:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:52:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 20:52 run_atlas
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc       105 Nov 26 20:52 job.xml
[2025-11-27 04:52:54] -rw-r--r-- 2 boinc boinc 410122476 Nov 26 20:52 EVNT.47483658._000555.pool.root.1
[2025-11-27 04:52:54] drwxrwx--x 2 boinc boinc      4096 Nov 26 20:52 shared
[2025-11-27 04:52:54] -rw-r--r-- 2 boinc boinc    590104 Nov 26 20:52 input.tar.gz
[2025-11-27 04:52:54] -rw-r--r-- 2 boinc boinc     15847 Nov 26 20:52 start_atlas.sh
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc         0 Nov 26 20:52 boinc_setup_complete
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc      6662 Nov 26 20:52 init_data.xml
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc         0 Nov 26 20:52 boinc_lockfile
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc      2786 Nov 26 20:52 pandaJob.out
[2025-11-27 04:52:54] -rw------- 1 boinc boinc        50 Nov 26 20:52 setup.sh.local
[2025-11-27 04:52:54] -rw------- 1 boinc boinc    991538 Nov 26 20:52 agis_schedconf.cvmfs.json
[2025-11-27 04:52:54] drwx------ 5 boinc boinc      4096 Nov 26 20:53 pilot3
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc       533 Nov 27 04:46 boinc_task_state.xml
[2025-11-27 04:52:54] -rw------- 1 boinc boinc 909529188 Nov 27 04:51 HITS.47556137._005506.pool.root.1
[2025-11-27 04:52:54] -rw------- 1 boinc boinc        95 Nov 27 04:51 pilot_heartbeat.json
[2025-11-27 04:52:54] -rw------- 1 boinc boinc      1032 Nov 27 04:51 memory_monitor_summary.json
[2025-11-27 04:52:54] -rw------- 1 boinc boinc   1516240 Nov 27 04:51 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:52:54] -rw------- 1 boinc boinc   1754991 Nov 27 04:51 log.47556137._005506.job.log.tgz.1
[2025-11-27 04:52:54] -rw------- 1 boinc boinc      8596 Nov 27 04:51 heartbeat.json
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc      8192 Nov 27 04:52 boinc_mmap_file
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc        29 Nov 27 04:52 wrapper_checkpoint.txt
[2025-11-27 04:52:54] -rw------- 1 boinc boinc      4965 Nov 27 04:52 pilotlog.txt
[2025-11-27 04:52:54] -rw------- 1 boinc boinc   4022588 Nov 27 04:52 log.47556137._005506.job.log.1
[2025-11-27 04:52:54] -rw------- 1 boinc boinc       353 Nov 27 04:52 output.list
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc       620 Nov 27 04:52 runtime_log
[2025-11-27 04:52:54] -rw------- 1 boinc boinc   5795840 Nov 27 04:52 result.tar.gz
[2025-11-27 04:52:54] -rw------- 1 boinc boinc       657 Nov 27 04:52 TuUNDmFUDh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQUKKDmyB26cm.diag
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc      9425 Nov 27 04:52 runtime_log.err
[2025-11-27 04:52:54] -rw-r--r-- 1 boinc boinc     20978 Nov 27 04:52 stderr.txt
[2025-11-27 04:52:54] HITS file was successfully produced:
[2025-11-27 04:52:54] -rw------- 1 boinc boinc 909529188 Nov 27 04:51 shared/HITS.pool.root.1
[2025-11-27 04:52:54]  *** Contents of shared directory: ***
[2025-11-27 04:52:54] total 1294992
[2025-11-27 04:52:54] -rw-r--r-- 2 boinc boinc 410122476 Nov 26 20:52 ATLAS.root_0
[2025-11-27 04:52:54] -rw-r--r-- 2 boinc boinc    590104 Nov 26 20:52 input.tar.gz
[2025-11-27 04:52:54] -rw-r--r-- 2 boinc boinc     15847 Nov 26 20:52 start_atlas.sh
[2025-11-27 04:52:54] -rw------- 1 boinc boinc 909529188 Nov 27 04:51 HITS.pool.root.1
[2025-11-27 04:52:54] -rw------- 1 boinc boinc   5795840 Nov 27 04:52 result.tar.gz
04:52:55 (1999454): run_atlas exited; CPU time 224974.704720
04:52:55 (1999454): called boinc_finish(0)

</stderr_txt>
]]>

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