Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
20:52:49 (2000348): wrapper (7.7.26015): starting
20:52:49 (2000348): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 20:52:49] Arguments: --nthreads 8
[2025-11-26 20:52:49] Threads: 8
[2025-11-26 20:52:49] Checking for CVMFS
[2025-11-26 20:52:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 20:52:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 20:52:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 20:52:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 20:52:49] 2.13.3.0 1999684 0 28060 153334 3 5 3341247 4096000 19 130560 0 1169 99.928 1291 1082 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-26 20:52:49] CVMFS is ok
[2025-11-26 20:52:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 20:52:49] Checking for apptainer binary...
[2025-11-26 20:52:49] apptainer is not installed, using version from CVMFS
[2025-11-26 20:52:49] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 20:52:49] senture-c621e-l
[2025-11-26 20:52:49] apptainer works
[2025-11-26 20:52:49] Set ATHENA_PROC_NUMBER=8
[2025-11-26 20:52:49] Set ATHENA_CORE_NUMBER=8
[2025-11-26 20:52:49] Starting ATLAS job with PandaID=6895339493
[2025-11-26 20:52:49] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:53:54]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:53:54] 2025-11-27 04:52:55,583 | INFO     | time since job start (28794s) is within the limit (172800.0s)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,130 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 04:53:54] 2025-11-27 04:52:56,133 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 2600.0039999999976
[2025-11-27 04:53:54] 2025-11-27 04:52:56,139 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6895339493/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,139 | INFO     | extracted standard info from prmon json
[2025-11-27 04:53:54] 2025-11-27 04:52:56,139 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:53:54] 2025-11-27 04:52:56,139 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:53:54] 2025-11-27 04:52:56,143 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:53:54] 2025-11-27 04:52:56,144 | INFO     | sum of square deviations: 32606322011.762756
[2025-11-27 04:53:54] 2025-11-27 04:52:56,146 | INFO     | sum of deviations: 392316178346.9152
[2025-11-27 04:53:54] 2025-11-27 04:52:56,146 | INFO     | mean x: 1764204769.661017
[2025-11-27 04:53:54] 2025-11-27 04:52:56,146 | INFO     | mean y: 2851543.343220339
[2025-11-27 04:53:54] 2025-11-27 04:52:56,146 | INFO     | intersect: -21223893159.88105
[2025-11-27 04:53:54] 2025-11-27 04:52:56,147 | INFO     | chi2: 4.004320536097579
[2025-11-27 04:53:54] 2025-11-27 04:52:56,147 | INFO     | sum of square deviations: 31581060851.631737
[2025-11-27 04:53:54] 2025-11-27 04:52:56,149 | INFO     | sum of deviations: 507764183790.2182
[2025-11-27 04:53:54] 2025-11-27 04:52:56,149 | INFO     | mean x: 1764204617.162741
[2025-11-27 04:53:54] 2025-11-27 04:52:56,149 | INFO     | mean y: 2868679.391862955
[2025-11-27 04:53:54] 2025-11-27 04:52:56,149 | INFO     | intersect: -28362230317.157177
[2025-11-27 04:53:54] 2025-11-27 04:52:56,150 | INFO     | chi2: 1.9636603917082143
[2025-11-27 04:53:54] 2025-11-27 04:52:56,150 | INFO     | current chi2=1.9636603917082143 (change=50.96145840457855 %)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,150 | INFO     | sum of square deviations: 30577521028.997746
[2025-11-27 04:53:54] 2025-11-27 04:52:56,152 | INFO     | sum of deviations: 499795321883.29614
[2025-11-27 04:53:54] 2025-11-27 04:52:56,152 | INFO     | mean x: 1764204464.6645021
[2025-11-27 04:53:54] 2025-11-27 04:52:56,152 | INFO     | mean y: 2867464.9632034632
[2025-11-27 04:53:54] 2025-11-27 04:52:56,152 | INFO     | intersect: -28833385724.062702
[2025-11-27 04:53:54] 2025-11-27 04:52:56,153 | INFO     | chi2: 1.955639861814108
[2025-11-27 04:53:54] 2025-11-27 04:52:56,153 | INFO     | current chi2=1.955639861814108 (change=0.4084479132936588 %)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,153 | INFO     | right removable region: 461
[2025-11-27 04:53:54] 2025-11-27 04:52:56,153 | INFO     | sum of square deviations: 31581014491.63174
[2025-11-27 04:53:54] 2025-11-27 04:52:56,155 | INFO     | sum of deviations: 283515263208.4498
[2025-11-27 04:53:54] 2025-11-27 04:52:56,155 | INFO     | mean x: 1764204922.162741
[2025-11-27 04:53:54] 2025-11-27 04:52:56,156 | INFO     | mean y: 2867670.336188437
[2025-11-27 04:53:54] 2025-11-27 04:52:56,156 | INFO     | intersect: -15835097984.41339
[2025-11-27 04:53:54] 2025-11-27 04:52:56,156 | INFO     | chi2: 2.1974513594711347
[2025-11-27 04:53:54] 2025-11-27 04:52:56,156 | INFO     | current chi2=2.1974513594711347 (change=45.12299053829825 %)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,156 | INFO     | sum of square deviations: 30577485281.647106
[2025-11-27 04:53:54] 2025-11-27 04:52:56,158 | INFO     | sum of deviations: 255688406939.64078
[2025-11-27 04:53:54] 2025-11-27 04:52:56,159 | INFO     | mean x: 1764205074.6601732
[2025-11-27 04:53:54] 2025-11-27 04:52:56,159 | INFO     | mean y: 2871895.9913419914
[2025-11-27 04:53:54] 2025-11-27 04:52:56,159 | INFO     | intersect: -14749380648.642738
[2025-11-27 04:53:54] 2025-11-27 04:52:56,159 | INFO     | chi2: 2.1563065053952672
[2025-11-27 04:53:54] 2025-11-27 04:52:56,159 | INFO     | current chi2=2.1563065053952672 (change=1.8723897527256235 %)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,159 | INFO     | left removable region: 20
[2025-11-27 04:53:54] 2025-11-27 04:52:56,159 | INFO     | sum of square deviations: 26594473719.58268
[2025-11-27 04:53:54] 2025-11-27 04:52:56,161 | INFO     | sum of deviations: 319236407908.48773
[2025-11-27 04:53:54] 2025-11-27 04:52:56,162 | INFO     | mean x: 1764205044.1678004
[2025-11-27 04:53:54] 2025-11-27 04:52:56,162 | INFO     | mean y: 2895371.358276644
[2025-11-27 04:53:54] 2025-11-27 04:52:56,162 | INFO     | intersect: -21174379541.19078
[2025-11-27 04:53:54] 2025-11-27 04:52:56,162 | INFO     | chi2: 0.0649289674169988
[2025-11-27 04:53:54] 2025-11-27 04:52:56,162 | INFO     | current memory leak: 12.00 B/s (using 441 data points, chi2=0.06)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,162 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,163 | INFO     | ..............................
[2025-11-27 04:53:54] 2025-11-27 04:52:56,163 | INFO     | . Timing measurements:
[2025-11-27 04:53:54] 2025-11-27 04:52:56,163 | INFO     | . get job = 0 s
[2025-11-27 04:53:54] 2025-11-27 04:52:56,163 | INFO     | . initial setup = 1 s
[2025-11-27 04:53:54] 2025-11-27 04:52:56,163 | INFO     | . payload setup = 5 s
[2025-11-27 04:53:54] 2025-11-27 04:52:56,163 | INFO     | . stage-in = 0 s
[2025-11-27 04:53:54] 2025-11-27 04:52:56,163 | INFO     | . payload execution = 28761 s
[2025-11-27 04:53:54] 2025-11-27 04:52:56,163 | INFO     | . stage-out = 1 s
[2025-11-27 04:53:54] 2025-11-27 04:52:56,163 | INFO     | . log creation = 0 s
[2025-11-27 04:53:54] 2025-11-27 04:52:56,163 | INFO     | ..............................
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | 
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | job summary report
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | --------------------------------------------------
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | PanDA job id: 6895339493
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | task id: 47556137
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | errors: (none)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | pilot state: finished 
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | transexitcode: 0
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | exeerrorcode: 0
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | exeerrordiag: 
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | exitcode: 0
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | exitmsg: OK
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | cpuconsumptiontime: 225069 s
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | nevents: 1000
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | neventsw: 0
[2025-11-27 04:53:54] 2025-11-27 04:52:56,289 | INFO     | pid: 2034188
[2025-11-27 04:53:54] 2025-11-27 04:52:56,290 | INFO     | pgrp: 2034188
[2025-11-27 04:53:54] 2025-11-27 04:52:56,290 | INFO     | corecount: 8
[2025-11-27 04:53:54] 2025-11-27 04:52:56,290 | INFO     | event service: False
[2025-11-27 04:53:54] 2025-11-27 04:52:56,290 | INFO     | sizes: {0: 2284044, 1: 2284299, 4: 2284561, 11: 2284589, 28770: 2322307, 28773: 2331315, 28775: 2331499, 28781: 2331745}
[2025-11-27 04:53:54] 2025-11-27 04:52:56,290 | INFO     | --------------------------------------------------
[2025-11-27 04:53:54] 2025-11-27 04:52:56,290 | INFO     | 
[2025-11-27 04:53:54] 2025-11-27 04:52:56,290 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-27 04:53:54] 2025-11-27 04:52:56,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,308 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,308 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,308 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,308 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,308 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | job 6895339493 has completed (purged errors)
[2025-11-27 04:53:54] 2025-11-27 04:52:56,309 | INFO     | overall cleanup function is called
[2025-11-27 04:53:54] 2025-11-27 04:52:57,322 | INFO     | --- collectZombieJob: --- 10, [2034188]
[2025-11-27 04:53:54] 2025-11-27 04:52:57,322 | INFO     | zombie collector waiting for pid 2034188
[2025-11-27 04:53:54] 2025-11-27 04:52:57,322 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:53:54] 2025-11-27 04:52:57,322 | INFO     | collected zombie processes
[2025-11-27 04:53:54] 2025-11-27 04:52:57,322 | INFO     | will attempt to kill all subprocesses of pid=2034188
[2025-11-27 04:53:54] 2025-11-27 04:52:57,448 | INFO     | process IDs to be killed: [2034188] (in reverse order)
[2025-11-27 04:53:54] 2025-11-27 04:52:57,532 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:53:54] 2025-11-27 04:52:57,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:53:54] 2025-11-27 04:52:57,537 | INFO     | did not find any defunct processes belonging to 2034188
[2025-11-27 04:53:54] 2025-11-27 04:52:57,541 | INFO     | did not find any defunct processes belonging to 2034188
[2025-11-27 04:53:54] 2025-11-27 04:52:57,544 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:53:54] 2025-11-27 04:52:57,544 | INFO     | ready for new job
[2025-11-27 04:53:54] 2025-11-27 04:52:57,544 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:53:54] 2025-11-27 04:52:57,547 | INFO     | ***************************************
[2025-11-27 04:53:54] 2025-11-27 04:52:57,547 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:53:54] 2025-11-27 04:52:57,547 | INFO     | ***************************************
[2025-11-27 04:53:54] 2025-11-27 04:52:57,547 | INFO     | 
[2025-11-27 04:53:54] 2025-11-27 04:52:57,549 | INFO     | pilot is running in a VM
[2025-11-27 04:53:54] 2025-11-27 04:52:57,549 | INFO     | architecture information:
[2025-11-27 04:53:54] 2025-11-27 04:52:57,550 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:53:54] 2025-11-27 04:52:57,564 | INFO     | cat /etc/os-release:
[2025-11-27 04:53:54] NAME="CentOS Linux"
[2025-11-27 04:53:54] VERSION="7 (Core)"
[2025-11-27 04:53:54] ID="centos"
[2025-11-27 04:53:54] ID_LIKE="rhel fedora"
[2025-11-27 04:53:54] VERSION_ID="7"
[2025-11-27 04:53:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:53:54] ANSI_COLOR="0;31"
[2025-11-27 04:53:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:53:54] HOME_URL="https://www.centos.org/"
[2025-11-27 04:53:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:53:54] 
[2025-11-27 04:53:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:53:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:53:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:53:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:53:54] 
[2025-11-27 04:53:54] 2025-11-27 04:52:57,564 | INFO     | ***************************************
[2025-11-27 04:53:54] 2025-11-27 04:52:58,067 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-27 04:53:54] 2025-11-27 04:52:58,083 | INFO     | sufficient remaining disk space (104405663744 B)
[2025-11-27 04:53:54] 2025-11-27 04:52:58,083 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:53:54] 2025-11-27 04:52:58,083 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:53:54] 2025-11-27 04:52:58,083 | INFO     | update_server=False
[2025-11-27 04:53:54] 2025-11-27 04:52:58,083 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:53:54] 2025-11-27 04:52:58,084 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:53:54] 2025-11-27 04:52:58,084 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:53:54] 2025-11-27 04:52:58,084 | INFO     | aborting loop
[2025-11-27 04:53:54] 2025-11-27 04:52:58,487 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:53:54] 2025-11-27 04:52:58,521 | INFO     | all payload control threads have been joined
[2025-11-27 04:53:54] 2025-11-27 04:52:58,788 | INFO     | all data control threads have been joined
[2025-11-27 04:53:54] 2025-11-27 04:52:59,089 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:52:59,089 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:52:59,090 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:52:59,171 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:52:59,324 | INFO     | all job control threads have been joined
[2025-11-27 04:53:54] 2025-11-27 04:52:59,445 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:52:59,526 | INFO     | [payload] control thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:52:59,564 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:52:59,793 | INFO     | [data] control thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:52:59,866 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:52:59,868 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:53:00,062 [wrapper] supervise_pilot (15 min periods counter: 33)
[2025-11-27 04:53:54] 2025-11-27 04:53:00,148 | INFO     | [job] validate thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:53:00,315 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:53:00,329 | INFO     | [job] control thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:53:00,493 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:53:00,493 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:53:00,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:53:54] 2025-11-27 04:53:04,672 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:53:54] 2025-11-27 04:53:28,844 | INFO     | PID=2007999 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:53:54] 2025-11-27 04:53:28,844 | INFO     | .. there are 5 such processes running
[2025-11-27 04:53:54] 2025-11-27 04:53:28,844 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:53:54] 2025-11-27 04:53:28,845 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:53:54] 2025-11-27 04:53:28,845 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:53:54] 2025-11-27 04:53:48,370 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:53:54] 2025-11-27 04:53:49,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126474334451520)>', '<ExcThread(monitor, started 126473415415552)>']
[2025-11-27 04:53:54] 2025-11-27 04:53:49,947 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:53:54] 2025-11-27 04:53:49,947 | INFO     | [monitor] control thread has ended
[2025-11-27 04:53:54] 2025-11-27 04:53:54,590 | INFO     | all workflow threads have been joined
[2025-11-27 04:53:54] 2025-11-27 04:53:54,590 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:53:54] 2025-11-27 04:53:54,590 | INFO     | traces error code: 0
[2025-11-27 04:53:54] 2025-11-27 04:53:54,590 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:53:54] 2025-11-27 04:53:54,707 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:53:54] 2025-11-27 04:53:54,710 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:53:54] 2025-11-27 04:53:54,712 [wrapper] pilotpid: 2007999
[2025-11-27 04:53:54] 2025-11-27 04:53:54,715 [wrapper] Pilot exit status: 0
[2025-11-27 04:53:54] 2025-11-27 04:53:54,723 [wrapper] pandaids: 6895339493
[2025-11-27 04:53:54] 2025-11-27 04:53:54,758 [wrapper] cleanup supervisor_pilot 2444922 2008000
[2025-11-27 04:53:54] 2025-11-27 04:53:54,760 [wrapper] Test setup, not cleaning
[2025-11-27 04:53:54] 2025-11-27 04:53:54,763 [wrapper] apfmon messages muted
[2025-11-27 04:53:54] 2025-11-27 04:53:54,766 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:53:54] 2025-11-27 04:53:54,768 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:53:54]  *** Error codes and diagnostics ***
[2025-11-27 04:53:54]     "exeErrorCode": 0,
[2025-11-27 04:53:54]     "exeErrorDiag": "",
[2025-11-27 04:53:54]     "pilotErrorCode": 0,
[2025-11-27 04:53:54]     "pilotErrorDiag": "",
[2025-11-27 04:53:54]  *** Listing of results directory ***
[2025-11-27 04:53:54] total 1314712
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc    576529 Nov 22 09:55 pilot3.tar.gz
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc      5112 Nov 22 10:16 queuedata.json
[2025-11-27 04:53:54] -rwx------ 1 boinc boinc     36292 Nov 22 10:17 runpilot2-wrapper.sh
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc       100 Nov 26 20:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:53:54] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 20:52 run_atlas
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc       105 Nov 26 20:52 job.xml
[2025-11-27 04:53:54] -rw-r--r-- 2 boinc boinc 409550684 Nov 26 20:52 EVNT.47483658._000348.pool.root.1
[2025-11-27 04:53:54] -rw-r--r-- 2 boinc boinc    590097 Nov 26 20:52 input.tar.gz
[2025-11-27 04:53:54] -rw-r--r-- 2 boinc boinc     15847 Nov 26 20:52 start_atlas.sh
[2025-11-27 04:53:54] drwxrwx--x 2 boinc boinc      4096 Nov 26 20:52 shared
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc         0 Nov 26 20:52 boinc_setup_complete
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc      6662 Nov 26 20:52 init_data.xml
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc         0 Nov 26 20:52 boinc_lockfile
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc      2785 Nov 26 20:52 pandaJob.out
[2025-11-27 04:53:54] -rw------- 1 boinc boinc        50 Nov 26 20:52 setup.sh.local
[2025-11-27 04:53:54] -rw------- 1 boinc boinc    991538 Nov 26 20:52 agis_schedconf.cvmfs.json
[2025-11-27 04:53:54] drwx------ 5 boinc boinc      4096 Nov 26 20:53 pilot3
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc       533 Nov 27 04:47 boinc_task_state.xml
[2025-11-27 04:53:54] -rw------- 1 boinc boinc 921211682 Nov 27 04:52 HITS.47556137._003442.pool.root.1
[2025-11-27 04:53:54] -rw------- 1 boinc boinc      1031 Nov 27 04:52 memory_monitor_summary.json
[2025-11-27 04:53:54] -rw------- 1 boinc boinc   1516240 Nov 27 04:52 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:53:54] -rw------- 1 boinc boinc   1753820 Nov 27 04:52 log.47556137._003442.job.log.tgz.1
[2025-11-27 04:53:54] -rw------- 1 boinc boinc      8606 Nov 27 04:52 heartbeat.json
[2025-11-27 04:53:54] -rw------- 1 boinc boinc        95 Nov 27 04:53 pilot_heartbeat.json
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc      8192 Nov 27 04:53 boinc_mmap_file
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc        29 Nov 27 04:53 wrapper_checkpoint.txt
[2025-11-27 04:53:54] -rw------- 1 boinc boinc      4893 Nov 27 04:53 pilotlog.txt
[2025-11-27 04:53:54] -rw------- 1 boinc boinc   4035049 Nov 27 04:53 log.47556137._003442.job.log.1
[2025-11-27 04:53:54] -rw------- 1 boinc boinc       353 Nov 27 04:53 output.list
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc       620 Nov 27 04:53 runtime_log
[2025-11-27 04:53:54] -rw------- 1 boinc boinc   5806080 Nov 27 04:53 result.tar.gz
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc      9425 Nov 27 04:53 runtime_log.err
[2025-11-27 04:53:54] -rw------- 1 boinc boinc       657 Nov 27 04:53 QZVKDmVrzg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmN7JKDm0dIp4n.diag
[2025-11-27 04:53:54] -rw-r--r-- 1 boinc boinc     20988 Nov 27 04:53 stderr.txt
[2025-11-27 04:53:54] HITS file was successfully produced:
[2025-11-27 04:53:54] -rw------- 1 boinc boinc 921211682 Nov 27 04:52 shared/HITS.pool.root.1
[2025-11-27 04:53:54]  *** Contents of shared directory: ***
[2025-11-27 04:53:54] total 1305852
[2025-11-27 04:53:54] -rw-r--r-- 2 boinc boinc 409550684 Nov 26 20:52 ATLAS.root_0
[2025-11-27 04:53:54] -rw-r--r-- 2 boinc boinc    590097 Nov 26 20:52 input.tar.gz
[2025-11-27 04:53:54] -rw-r--r-- 2 boinc boinc     15847 Nov 26 20:52 start_atlas.sh
[2025-11-27 04:53:54] -rw------- 1 boinc boinc 921211682 Nov 27 04:52 HITS.pool.root.1
[2025-11-27 04:53:54] -rw------- 1 boinc boinc   5806080 Nov 27 04:53 result.tar.gz
04:53:56 (2000348): run_atlas exited; CPU time 225563.015982
04:53:56 (2000348): called boinc_finish(0)

</stderr_txt>
]]>

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