Stderr output

<core_client_version>8.2.6</core_client_version>
<![CDATA[
<stderr_txt>
20:53:26 (2058256): wrapper (7.7.26015): starting
20:53:26 (2058256): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 20:53:26] Arguments: --nthreads 8
[2025-11-26 20:53:26] Threads: 8
[2025-11-26 20:53:26] Checking for CVMFS
[2025-11-26 20:53:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 20:53:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 20:53:26] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 20:53:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 20:53:27] 2.13.3.0 1999684 0 38972 153334 3 87 3345869 4096001 580 130560 0 140348 99.994 1372 1067 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.178:3128 1
[2025-11-26 20:53:27] CVMFS is ok
[2025-11-26 20:53:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 20:53:27] Checking for apptainer binary...
[2025-11-26 20:53:27] apptainer is not installed, using version from CVMFS
[2025-11-26 20:53:27] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 20:53:27] senture-c621e-l
[2025-11-26 20:53:27] apptainer works
[2025-11-26 20:53:27] Set ATHENA_PROC_NUMBER=8
[2025-11-26 20:53:27] Set ATHENA_CORE_NUMBER=8
[2025-11-26 20:53:27] Starting ATLAS job with PandaID=6896765386
[2025-11-26 20:53:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:55:28]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:55:28] 2025-11-27 04:54:40,297 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 04:55:28] 2025-11-27 04:54:41,737 | INFO     | time since job start (28866s) is within the limit (172800.0s)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,420 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 04:55:28] 2025-11-27 04:54:42,423 | INFO     | found 32 cores (32 cores per socket, 1 socket) HT, CPU MHz: 2600.0039999999976
[2025-11-27 04:55:28] 2025-11-27 04:54:42,429 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6896765386/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,429 | INFO     | extracted standard info from prmon json
[2025-11-27 04:55:28] 2025-11-27 04:54:42,429 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:55:28] 2025-11-27 04:54:42,429 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:55:28] 2025-11-27 04:54:42,433 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:55:28] 2025-11-27 04:54:42,434 | INFO     | sum of square deviations: 32813949641.52641
[2025-11-27 04:55:28] 2025-11-27 04:54:42,436 | INFO     | sum of deviations: 424862175314.7039
[2025-11-27 04:55:28] 2025-11-27 04:54:42,436 | INFO     | mean x: 1764204834.0972517
[2025-11-27 04:55:28] 2025-11-27 04:54:42,436 | INFO     | mean y: 2859882.310782241
[2025-11-27 04:55:28] 2025-11-27 04:54:42,437 | INFO     | intersect: -22839373731.856735
[2025-11-27 04:55:28] 2025-11-27 04:54:42,437 | INFO     | chi2: 3.9098769296080285
[2025-11-27 04:55:28] 2025-11-27 04:54:42,437 | INFO     | sum of square deviations: 31784307156.478695
[2025-11-27 04:55:28] 2025-11-27 04:54:42,440 | INFO     | sum of deviations: 529067764024.84644
[2025-11-27 04:55:28] 2025-11-27 04:54:42,440 | INFO     | mean x: 1764204681.5982907
[2025-11-27 04:55:28] 2025-11-27 04:54:42,440 | INFO     | mean y: 2875267.5576923075
[2025-11-27 04:55:28] 2025-11-27 04:54:42,440 | INFO     | intersect: -29363309169.94449
[2025-11-27 04:55:28] 2025-11-27 04:54:42,440 | INFO     | chi2: 1.9245666993136952
[2025-11-27 04:55:28] 2025-11-27 04:54:42,440 | INFO     | current chi2=1.9245666993136952 (change=50.776795946192706 %)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,440 | INFO     | sum of square deviations: 30776432521.429764
[2025-11-27 04:55:28] 2025-11-27 04:54:42,443 | INFO     | sum of deviations: 518448390115.84894
[2025-11-27 04:55:28] 2025-11-27 04:54:42,443 | INFO     | mean x: 1764204529.0993521
[2025-11-27 04:55:28] 2025-11-27 04:54:42,443 | INFO     | mean y: 2873660.8293736503
[2025-11-27 04:55:28] 2025-11-27 04:54:42,443 | INFO     | intersect: -29716262802.10454
[2025-11-27 04:55:28] 2025-11-27 04:54:42,443 | INFO     | chi2: 1.9218605464702525
[2025-11-27 04:55:28] 2025-11-27 04:54:42,443 | INFO     | current chi2=1.9218605464702525 (change=0.14061101880270954 %)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,443 | INFO     | right removable region: 462
[2025-11-27 04:55:28] 2025-11-27 04:54:42,443 | INFO     | sum of square deviations: 31784279096.478683
[2025-11-27 04:55:28] 2025-11-27 04:54:42,446 | INFO     | sum of deviations: 315904432284.35034
[2025-11-27 04:55:28] 2025-11-27 04:54:42,446 | INFO     | mean x: 1764204986.5982907
[2025-11-27 04:55:28] 2025-11-27 04:54:42,446 | INFO     | mean y: 2875964.688034188
[2025-11-27 04:55:28] 2025-11-27 04:54:42,446 | INFO     | intersect: -17531584169.922894
[2025-11-27 04:55:28] 2025-11-27 04:54:42,446 | INFO     | chi2: 2.1360747223498984
[2025-11-27 04:55:28] 2025-11-27 04:54:42,446 | INFO     | current chi2=2.1360747223498984 (change=45.367213321365504 %)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,447 | INFO     | sum of square deviations: 30776404704.62645
[2025-11-27 04:55:28] 2025-11-27 04:54:42,449 | INFO     | sum of deviations: 286942352157.0172
[2025-11-27 04:55:28] 2025-11-27 04:54:42,449 | INFO     | mean x: 1764205139.0971923
[2025-11-27 04:55:28] 2025-11-27 04:54:42,449 | INFO     | mean y: 2880344.2440604754
[2025-11-27 04:55:28] 2025-11-27 04:54:42,449 | INFO     | intersect: -16445602743.968904
[2025-11-27 04:55:28] 2025-11-27 04:54:42,449 | INFO     | chi2: 2.094578178374805
[2025-11-27 04:55:28] 2025-11-27 04:54:42,449 | INFO     | current chi2=2.094578178374805 (change=1.942654137559523 %)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,449 | INFO     | left removable region: 20
[2025-11-27 04:55:28] 2025-11-27 04:54:42,450 | INFO     | sum of square deviations: 26775704484.11988
[2025-11-27 04:55:28] 2025-11-27 04:54:42,452 | INFO     | sum of deviations: 336771127979.30756
[2025-11-27 04:55:28] 2025-11-27 04:54:42,452 | INFO     | mean x: 1764205108.5995476
[2025-11-27 04:55:28] 2025-11-27 04:54:42,452 | INFO     | mean y: 2901644.5384615385
[2025-11-27 04:55:28] 2025-11-27 04:54:42,452 | INFO     | intersect: -22186368660.647896
[2025-11-27 04:55:28] 2025-11-27 04:54:42,452 | INFO     | chi2: 0.0651017399459745
[2025-11-27 04:55:28] 2025-11-27 04:54:42,452 | INFO     | current memory leak: 12.58 B/s (using 442 data points, chi2=0.07)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,452 | INFO     | could have reported an average CPU frequency of 2600 MHz (19 samples)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,453 | INFO     | ..............................
[2025-11-27 04:55:28] 2025-11-27 04:54:42,453 | INFO     | . Timing measurements:
[2025-11-27 04:55:28] 2025-11-27 04:54:42,453 | INFO     | . get job = 0 s
[2025-11-27 04:55:28] 2025-11-27 04:54:42,453 | INFO     | . initial setup = 1 s
[2025-11-27 04:55:28] 2025-11-27 04:54:42,453 | INFO     | . payload setup = 4 s
[2025-11-27 04:55:28] 2025-11-27 04:54:42,453 | INFO     | . stage-in = 0 s
[2025-11-27 04:55:28] 2025-11-27 04:54:42,453 | INFO     | . payload execution = 28835 s
[2025-11-27 04:55:28] 2025-11-27 04:54:42,453 | INFO     | . stage-out = 1 s
[2025-11-27 04:55:28] 2025-11-27 04:54:42,453 | INFO     | . log creation = 0 s
[2025-11-27 04:55:28] 2025-11-27 04:54:42,453 | INFO     | ..............................
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | 
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | job summary report
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | --------------------------------------------------
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | PanDA job id: 6896765386
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | task id: 47556185
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | errors: (none)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | pilot state: finished 
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | transexitcode: 0
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | exeerrorcode: 0
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | exeerrordiag: 
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | exitcode: 0
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | exitmsg: OK
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | cpuconsumptiontime: 225883 s
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | nevents: 1000
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | neventsw: 0
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | pid: 2123008
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | pgrp: 2123008
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | corecount: 8
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | event service: False
[2025-11-27 04:55:28] 2025-11-27 04:54:42,531 | INFO     | sizes: {0: 2284319, 3: 2284581, 11: 2284609, 28843: 2322462, 28845: 2331470, 28846: 2331526, 28853: 2331900}
[2025-11-27 04:55:28] 2025-11-27 04:54:42,532 | INFO     | --------------------------------------------------
[2025-11-27 04:55:28] 2025-11-27 04:54:42,532 | INFO     | 
[2025-11-27 04:55:28] 2025-11-27 04:54:42,532 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,551 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,552 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,552 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,552 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,552 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,552 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,552 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:55:28] 2025-11-27 04:54:42,552 | INFO     | job 6896765386 has completed (purged errors)
[2025-11-27 04:55:28] 2025-11-27 04:54:42,552 | INFO     | overall cleanup function is called
[2025-11-27 04:55:28] 2025-11-27 04:54:43,564 | INFO     | --- collectZombieJob: --- 10, [2123008]
[2025-11-27 04:55:28] 2025-11-27 04:54:43,565 | INFO     | zombie collector waiting for pid 2123008
[2025-11-27 04:55:28] 2025-11-27 04:54:43,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:55:28] 2025-11-27 04:54:43,565 | INFO     | collected zombie processes
[2025-11-27 04:55:28] 2025-11-27 04:54:43,565 | INFO     | will attempt to kill all subprocesses of pid=2123008
[2025-11-27 04:55:28] 2025-11-27 04:54:43,674 | INFO     | process IDs to be killed: [2123008] (in reverse order)
[2025-11-27 04:55:28] 2025-11-27 04:54:43,734 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:55:28] 2025-11-27 04:54:43,735 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:55:28] 2025-11-27 04:54:43,738 | INFO     | did not find any defunct processes belonging to 2123008
[2025-11-27 04:55:28] 2025-11-27 04:54:43,741 | INFO     | did not find any defunct processes belonging to 2123008
[2025-11-27 04:55:28] 2025-11-27 04:54:43,744 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:55:28] 2025-11-27 04:54:43,744 | INFO     | ready for new job
[2025-11-27 04:55:28] 2025-11-27 04:54:43,744 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:55:28] 2025-11-27 04:54:43,747 | INFO     | ***************************************
[2025-11-27 04:55:28] 2025-11-27 04:54:43,747 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:55:28] 2025-11-27 04:54:43,747 | INFO     | ***************************************
[2025-11-27 04:55:28] 2025-11-27 04:54:43,747 | INFO     | 
[2025-11-27 04:55:28] 2025-11-27 04:54:43,749 | INFO     | pilot is running in a VM
[2025-11-27 04:55:28] 2025-11-27 04:54:43,749 | INFO     | architecture information:
[2025-11-27 04:55:28] 2025-11-27 04:54:43,749 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:55:28] 2025-11-27 04:54:43,762 | INFO     | cat /etc/os-release:
[2025-11-27 04:55:28] NAME="CentOS Linux"
[2025-11-27 04:55:28] VERSION="7 (Core)"
[2025-11-27 04:55:28] ID="centos"
[2025-11-27 04:55:28] ID_LIKE="rhel fedora"
[2025-11-27 04:55:28] VERSION_ID="7"
[2025-11-27 04:55:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:55:28] ANSI_COLOR="0;31"
[2025-11-27 04:55:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:55:28] HOME_URL="https://www.centos.org/"
[2025-11-27 04:55:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:55:28] 
[2025-11-27 04:55:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:55:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:55:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:55:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:55:28] 
[2025-11-27 04:55:28] 2025-11-27 04:54:43,762 | INFO     | ***************************************
[2025-11-27 04:55:28] 2025-11-27 04:54:44,265 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-11-27 04:55:28] 2025-11-27 04:54:44,278 | INFO     | sufficient remaining disk space (110167588864 B)
[2025-11-27 04:55:28] 2025-11-27 04:54:44,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:55:28] 2025-11-27 04:54:44,279 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:55:28] 2025-11-27 04:54:44,279 | INFO     | update_server=False
[2025-11-27 04:55:28] 2025-11-27 04:54:44,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:55:28] 2025-11-27 04:54:44,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:55:28] 2025-11-27 04:54:44,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:55:28] 2025-11-27 04:54:44,280 | INFO     | aborting loop
[2025-11-27 04:55:28] 2025-11-27 04:54:44,814 | INFO     | all payload control threads have been joined
[2025-11-27 04:55:28] 2025-11-27 04:54:44,860 | INFO     | all data control threads have been joined
[2025-11-27 04:55:28] 2025-11-27 04:54:45,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:55:28] 2025-11-27 04:54:45,232 | INFO     | all job control threads have been joined
[2025-11-27 04:55:28] 2025-11-27 04:54:45,281 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:45,285 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:45,285 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:45,812 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:45,819 | INFO     | [payload] control thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:45,865 | INFO     | [data] control thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:45,946 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:46,237 | INFO     | [job] control thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:46,376 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:46,399 | INFO     | [job] validate thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:46,434 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:46,600 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:55:28] 2025-11-27 04:54:46,700 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:46,731 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:47,066 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:50,606 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:54:55,022 | INFO     | job.realtimelogging is not enabled
[2025-11-27 04:55:28] 2025-11-27 04:54:56,028 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:55:28] 2025-11-27 04:55:14,888 | INFO     | PID=2081040 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:55:28] 2025-11-27 04:55:14,889 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:55:28] 2025-11-27 04:55:14,889 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:55:28] 2025-11-27 04:55:14,889 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:55:28] 2025-11-27 04:55:22,714 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:55:28] 2025-11-27 04:55:23,517 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136357231421248)>', '<ExcThread(monitor, started 136356403599104)>']
[2025-11-27 04:55:28] 2025-11-27 04:55:23,936 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:55:28] 2025-11-27 04:55:23,936 | INFO     | [monitor] control thread has ended
[2025-11-27 04:55:28] 2025-11-27 04:55:28,543 | INFO     | all workflow threads have been joined
[2025-11-27 04:55:28] 2025-11-27 04:55:28,543 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:55:28] 2025-11-27 04:55:28,543 | INFO     | traces error code: 0
[2025-11-27 04:55:28] 2025-11-27 04:55:28,543 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:55:28] 2025-11-27 04:55:28,657 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:55:28] 2025-11-27 04:55:28,660 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:55:28] 2025-11-27 04:55:28,663 [wrapper] pilotpid: 2081040
[2025-11-27 04:55:28] 2025-11-27 04:55:28,666 [wrapper] Pilot exit status: 0
[2025-11-27 04:55:28] 2025-11-27 04:55:28,674 [wrapper] pandaids: 6896765386
[2025-11-27 04:55:28] 2025-11-27 04:55:28,708 [wrapper] cleanup supervisor_pilot 2447133 2081041
[2025-11-27 04:55:28] 2025-11-27 04:55:28,711 [wrapper] Test setup, not cleaning
[2025-11-27 04:55:28] 2025-11-27 04:55:28,713 [wrapper] apfmon messages muted
[2025-11-27 04:55:28] 2025-11-27 04:55:28,715 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:55:28] 2025-11-27 04:55:28,718 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:55:28]  *** Error codes and diagnostics ***
[2025-11-27 04:55:28]     "exeErrorCode": 0,
[2025-11-27 04:55:28]     "exeErrorDiag": "",
[2025-11-27 04:55:28]     "pilotErrorCode": 0,
[2025-11-27 04:55:28]     "pilotErrorDiag": "",
[2025-11-27 04:55:28]  *** Listing of results directory ***
[2025-11-27 04:55:28] total 1316236
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc    576529 Nov 25 08:55 pilot3.tar.gz
[2025-11-27 04:55:28] -rwx------ 1 boinc boinc     36292 Nov 25 09:06 runpilot2-wrapper.sh
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc      5112 Nov 25 09:06 queuedata.json
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc       100 Nov 26 20:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:55:28] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 20:53 run_atlas
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc       105 Nov 26 20:53 job.xml
[2025-11-27 04:55:28] -rw-r--r-- 2 boinc boinc 409225455 Nov 26 20:53 EVNT.47483658._004261.pool.root.1
[2025-11-27 04:55:28] drwxrwx--x 2 boinc boinc      4096 Nov 26 20:53 shared
[2025-11-27 04:55:28] -rw-r--r-- 2 boinc boinc    590102 Nov 26 20:53 input.tar.gz
[2025-11-27 04:55:28] -rw-r--r-- 2 boinc boinc     15847 Nov 26 20:53 start_atlas.sh
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc         0 Nov 26 20:53 boinc_setup_complete
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc      6662 Nov 26 20:53 init_data.xml
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc         0 Nov 26 20:53 boinc_lockfile
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc      2784 Nov 26 20:53 pandaJob.out
[2025-11-27 04:55:28] -rw------- 1 boinc boinc        50 Nov 26 20:53 setup.sh.local
[2025-11-27 04:55:28] -rw------- 1 boinc boinc    991538 Nov 26 20:53 agis_schedconf.cvmfs.json
[2025-11-27 04:55:28] drwx------ 5 boinc boinc      4096 Nov 26 20:53 pilot3
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc       532 Nov 27 04:49 boinc_task_state.xml
[2025-11-27 04:55:28] -rw------- 1 boinc boinc 923062568 Nov 27 04:54 HITS.47556185._000247.pool.root.1
[2025-11-27 04:55:28] -rw------- 1 boinc boinc      1038 Nov 27 04:54 memory_monitor_summary.json
[2025-11-27 04:55:28] -rw------- 1 boinc boinc   1516240 Nov 27 04:54 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:55:28] -rw------- 1 boinc boinc   1755043 Nov 27 04:54 log.47556185._000247.job.log.tgz.1
[2025-11-27 04:55:28] -rw------- 1 boinc boinc      8593 Nov 27 04:54 heartbeat.json
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc        29 Nov 27 04:54 wrapper_checkpoint.txt
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc      8192 Nov 27 04:54 boinc_mmap_file
[2025-11-27 04:55:28] -rw------- 1 boinc boinc        95 Nov 27 04:55 pilot_heartbeat.json
[2025-11-27 04:55:28] -rw------- 1 boinc boinc      4890 Nov 27 04:55 pilotlog.txt
[2025-11-27 04:55:28] -rw------- 1 boinc boinc   4048003 Nov 27 04:55 log.47556185._000247.job.log.1
[2025-11-27 04:55:28] -rw------- 1 boinc boinc       353 Nov 27 04:55 output.list
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc       620 Nov 27 04:55 runtime_log
[2025-11-27 04:55:28] -rw------- 1 boinc boinc   5826560 Nov 27 04:55 result.tar.gz
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc      9425 Nov 27 04:55 runtime_log.err
[2025-11-27 04:55:28] -rw------- 1 boinc boinc       657 Nov 27 04:55 NSIMDmEB4h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjHMKDmexqJNn.diag
[2025-11-27 04:55:28] -rw-r--r-- 1 boinc boinc     21024 Nov 27 04:55 stderr.txt
[2025-11-27 04:55:28] HITS file was successfully produced:
[2025-11-27 04:55:28] -rw------- 1 boinc boinc 923062568 Nov 27 04:54 shared/HITS.pool.root.1
[2025-11-27 04:55:28]  *** Contents of shared directory: ***
[2025-11-27 04:55:28] total 1307364
[2025-11-27 04:55:28] -rw-r--r-- 2 boinc boinc 409225455 Nov 26 20:53 ATLAS.root_0
[2025-11-27 04:55:28] -rw-r--r-- 2 boinc boinc    590102 Nov 26 20:53 input.tar.gz
[2025-11-27 04:55:28] -rw-r--r-- 2 boinc boinc     15847 Nov 26 20:53 start_atlas.sh
[2025-11-27 04:55:28] -rw------- 1 boinc boinc 923062568 Nov 27 04:54 HITS.pool.root.1
[2025-11-27 04:55:28] -rw------- 1 boinc boinc   5826560 Nov 27 04:55 result.tar.gz
04:55:29 (2058256): run_atlas exited; CPU time 226401.969082
04:55:29 (2058256): called boinc_finish(0)

</stderr_txt>
]]>

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