Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
16:12:28 (1412908): wrapper (7.7.26015): starting
16:12:28 (1412908): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 16:12:28] Arguments: --nthreads 8
[2025-11-26 16:12:28] Threads: 8
[2025-11-26 16:12:28] Checking for CVMFS
[2025-11-26 16:12:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 16:12:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 16:12:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 16:12:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 16:12:29] 2.13.3.0 17216 30439 475784 153334 1 710 19709353 32935937 68702 16776704 0 537550046 99.678 425012569 48109 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 16:12:29] CVMFS is ok
[2025-11-26 16:12:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 16:12:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 16:12:29] Further information can be found at the LHC@home message board.
[2025-11-26 16:12:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 16:12:29] Checking for apptainer binary...
[2025-11-26 16:12:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 16:12:29] Running /usr/bin/apptainer --version
[2025-11-26 16:12:29] apptainer version 1.4.4-1.el9
[2025-11-26 16:12:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 16:12:29] c7-9-14.aglt2.org
[2025-11-26 16:12:29] apptainer works
[2025-11-26 16:12:29] Set ATHENA_PROC_NUMBER=8
[2025-11-26 16:12:29] Set ATHENA_CORE_NUMBER=8
[2025-11-26 16:12:30] Starting ATLAS job with PandaID=6896764159
[2025-11-26 16:12:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:58:03]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:58:03] 2025-11-27 03:57:11,572 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.2797265624986
[2025-11-26 22:58:03] 2025-11-27 03:57:11,681 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6896764159/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 22:58:03] 2025-11-27 03:57:11,682 | INFO     | extracted standard info from prmon json
[2025-11-26 22:58:03] 2025-11-27 03:57:11,682 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 22:58:03] 2025-11-27 03:57:11,682 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:58:03] 2025-11-27 03:57:11,744 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:58:03] 2025-11-27 03:57:11,744 | INFO     | sum of square deviations: 19110413668.379795
[2025-11-26 22:58:03] 2025-11-27 03:57:11,747 | INFO     | sum of deviations: 234453812474.18976
[2025-11-26 22:58:03] 2025-11-27 03:57:11,747 | INFO     | mean x: 1764203727.6455696
[2025-11-26 22:58:03] 2025-11-27 03:57:11,747 | INFO     | mean y: 2847892.8227848103
[2025-11-26 22:58:03] 2025-11-27 03:57:11,747 | INFO     | intersect: -21641073432.23289
[2025-11-26 22:58:03] 2025-11-27 03:57:11,747 | INFO     | chi2: 9.24153050753136
[2025-11-26 22:58:03] 2025-11-27 03:57:11,757 | INFO     | sum of square deviations: 18393929168.769222
[2025-11-26 22:58:03] 2025-11-27 03:57:11,759 | INFO     | sum of deviations: 372085336058.2303
[2025-11-26 22:58:03] 2025-11-27 03:57:11,760 | INFO     | mean x: 1764203575.1538463
[2025-11-26 22:58:03] 2025-11-27 03:57:11,760 | INFO     | mean y: 2877201.412820513
[2025-11-26 22:58:03] 2025-11-27 03:57:11,760 | INFO     | intersect: -35684673517.810356
[2025-11-26 22:58:03] 2025-11-27 03:57:11,760 | INFO     | chi2: 5.830156233027818
[2025-11-26 22:58:03] 2025-11-27 03:57:11,760 | INFO     | current chi2=5.830156233027818 (change=36.91352067412916 %)
[2025-11-26 22:58:03] 2025-11-27 03:57:11,768 | INFO     | sum of square deviations: 17695560998.425983
[2025-11-26 22:58:03] 2025-11-27 03:57:11,770 | INFO     | sum of deviations: 411153213918.4472
[2025-11-26 22:58:03] 2025-11-27 03:57:11,770 | INFO     | mean x: 1764203422.6597402
[2025-11-26 22:58:03] 2025-11-27 03:57:11,770 | INFO     | mean y: 2885644.6675324677
[2025-11-26 22:58:03] 2025-11-27 03:57:11,771 | INFO     | intersect: -40988067244.42128
[2025-11-26 22:58:03] 2025-11-27 03:57:11,771 | INFO     | chi2: 4.852698205552948
[2025-11-26 22:58:03] 2025-11-27 03:57:11,771 | INFO     | current chi2=4.852698205552948 (change=16.7655546164882 %)
[2025-11-26 22:58:03] 2025-11-27 03:57:11,771 | INFO     | right removable region: 384
[2025-11-26 22:58:03] 2025-11-27 03:57:11,771 | INFO     | sum of square deviations: 18393773618.769238
[2025-11-26 22:58:03] 2025-11-27 03:57:11,782 | INFO     | sum of deviations: 75363750707.38474
[2025-11-26 22:58:03] 2025-11-27 03:57:11,782 | INFO     | mean x: 1764203880.1538463
[2025-11-26 22:58:03] 2025-11-27 03:57:11,782 | INFO     | mean y: 2881740.2769230767
[2025-11-26 22:58:03] 2025-11-27 03:57:11,782 | INFO     | intersect: -7225489347.494013
[2025-11-26 22:58:03] 2025-11-27 03:57:11,783 | INFO     | chi2: 4.932557035673664
[2025-11-26 22:58:03] 2025-11-27 03:57:11,783 | INFO     | current chi2=4.932557035673664 (change=46.62618890178537 %)
[2025-11-26 22:58:03] 2025-11-27 03:57:11,783 | INFO     | sum of square deviations: 17695273444.103935
[2025-11-26 22:58:03] 2025-11-27 03:57:11,785 | INFO     | sum of deviations: 37152082280.31149
[2025-11-26 22:58:03] 2025-11-27 03:57:11,785 | INFO     | mean x: 1764204032.6623378
[2025-11-26 22:58:03] 2025-11-27 03:57:11,785 | INFO     | mean y: 2890043.187012987
[2025-11-26 22:58:03] 2025-11-27 03:57:11,785 | INFO     | intersect: -3701141634.4114885
[2025-11-26 22:58:03] 2025-11-27 03:57:11,793 | INFO     | chi2: 4.58019056934103
[2025-11-26 22:58:03] 2025-11-27 03:57:11,793 | INFO     | current chi2=4.58019056934103 (change=7.143687620522554 %)
[2025-11-26 22:58:03] 2025-11-27 03:57:11,793 | INFO     | left removable region: 20
[2025-11-26 22:58:03] 2025-11-27 03:57:11,793 | INFO     | sum of square deviations: 14954776883.296665
[2025-11-26 22:58:03] 2025-11-27 03:57:11,795 | INFO     | sum of deviations: 189267971012.5274
[2025-11-26 22:58:03] 2025-11-27 03:57:11,795 | INFO     | mean x: 1764204002.186813
[2025-11-26 22:58:03] 2025-11-27 03:57:11,795 | INFO     | mean y: 2935346.10989011
[2025-11-26 22:58:03] 2025-11-27 03:57:11,795 | INFO     | intersect: -22324867639.638924
[2025-11-26 22:58:03] 2025-11-27 03:57:11,795 | INFO     | chi2: 0.011331428831730285
[2025-11-26 22:58:03] 2025-11-27 03:57:11,795 | INFO     | current memory leak: 12.66 B/s (using 364 data points, chi2=0.01)
[2025-11-26 22:58:03] 2025-11-27 03:57:11,796 | INFO     | could have reported an average CPU frequency of 3799 MHz (17 samples)
[2025-11-26 22:58:03] 2025-11-27 03:57:11,796 | INFO     | ..............................
[2025-11-26 22:58:03] 2025-11-27 03:57:11,796 | INFO     | . Timing measurements:
[2025-11-26 22:58:03] 2025-11-27 03:57:11,796 | INFO     | . get job = 0 s
[2025-11-26 22:58:03] 2025-11-27 03:57:11,796 | INFO     | . initial setup = 4 s
[2025-11-26 22:58:03] 2025-11-27 03:57:11,796 | INFO     | . payload setup = 37 s
[2025-11-26 22:58:03] 2025-11-27 03:57:11,796 | INFO     | . stage-in = 0 s
[2025-11-26 22:58:03] 2025-11-27 03:57:11,796 | INFO     | . payload execution = 24106 s
[2025-11-26 22:58:03] 2025-11-27 03:57:11,796 | INFO     | . stage-out = 4 s
[2025-11-26 22:58:03] 2025-11-27 03:57:11,805 | INFO     | . log creation = 0 s
[2025-11-26 22:58:03] 2025-11-27 03:57:11,805 | INFO     | ..............................
[2025-11-26 22:58:03] 2025-11-27 03:57:12,348 | INFO     | 
[2025-11-26 22:58:03] 2025-11-27 03:57:12,348 | INFO     | job summary report
[2025-11-26 22:58:03] 2025-11-27 03:57:12,348 | INFO     | --------------------------------------------------
[2025-11-26 22:58:03] 2025-11-27 03:57:12,348 | INFO     | PanDA job id: 6896764159
[2025-11-26 22:58:03] 2025-11-27 03:57:12,348 | INFO     | task id: 47556185
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | errors: (none)
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | pilot state: finished 
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | transexitcode: 0
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | exeerrorcode: 0
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | exeerrordiag: 
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | exitcode: 0
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | exitmsg: OK
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | cpuconsumptiontime: 138167 s
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | nevents: 1000
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | neventsw: 0
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | pid: 1458108
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | pgrp: 1458108
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | corecount: 8
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | event service: False
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | sizes: {0: 2284312, 1: 2284340, 11: 2284340, 22: 2284630, 33: 2284658, 24147: 2320911, 24152: 2329905, 24153: 2329961, 24181: 2330271}
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | --------------------------------------------------
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | 
[2025-11-26 22:58:03] 2025-11-27 03:57:12,349 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-26 22:58:03] 2025-11-27 03:57:12,427 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | job 6896764159 has completed (purged errors)
[2025-11-26 22:58:03] 2025-11-27 03:57:12,428 | INFO     | overall cleanup function is called
[2025-11-26 22:58:03] 2025-11-27 03:57:13,381 | INFO     | PID=1423939 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:58:03] 2025-11-27 03:57:13,382 | INFO     | .. there are 105 such processes running
[2025-11-26 22:58:03] 2025-11-27 03:57:13,514 | INFO     | --- collectZombieJob: --- 10, [1458108]
[2025-11-26 22:58:03] 2025-11-27 03:57:13,514 | INFO     | zombie collector waiting for pid 1458108
[2025-11-26 22:58:03] 2025-11-27 03:57:13,514 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:58:03] 2025-11-27 03:57:13,515 | INFO     | collected zombie processes
[2025-11-26 22:58:03] 2025-11-27 03:57:13,515 | INFO     | will attempt to kill all subprocesses of pid=1458108
[2025-11-26 22:58:03] 2025-11-27 03:57:14,939 | INFO     | process IDs to be killed: [1458108] (in reverse order)
[2025-11-26 22:58:03] 2025-11-27 03:57:15,437 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:58:03] 2025-11-27 03:57:15,437 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:58:03] 2025-11-27 03:57:15,561 | INFO     | did not find any defunct processes belonging to 1458108
[2025-11-26 22:58:03] 2025-11-27 03:57:15,594 | INFO     | did not find any defunct processes belonging to 1458108
[2025-11-26 22:58:03] 2025-11-27 03:57:15,604 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:58:03] 2025-11-27 03:57:15,604 | INFO     | ready for new job
[2025-11-26 22:58:03] 2025-11-27 03:57:15,604 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:58:03] 2025-11-27 03:57:15,606 | INFO     | ***************************************
[2025-11-26 22:58:03] 2025-11-27 03:57:15,607 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:58:03] 2025-11-27 03:57:15,607 | INFO     | ***************************************
[2025-11-26 22:58:03] 2025-11-27 03:57:15,607 | INFO     | 
[2025-11-26 22:58:03] 2025-11-27 03:57:15,612 | INFO     | architecture information:
[2025-11-26 22:58:03] 2025-11-27 03:57:15,627 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:58:03] 2025-11-27 03:57:15,656 | INFO     | cat /etc/os-release:
[2025-11-26 22:58:03] NAME="CentOS Linux"
[2025-11-26 22:58:03] VERSION="7 (Core)"
[2025-11-26 22:58:03] ID="centos"
[2025-11-26 22:58:03] ID_LIKE="rhel fedora"
[2025-11-26 22:58:03] VERSION_ID="7"
[2025-11-26 22:58:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:58:03] ANSI_COLOR="0;31"
[2025-11-26 22:58:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:58:03] HOME_URL="https://www.centos.org/"
[2025-11-26 22:58:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:58:03] 
[2025-11-26 22:58:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:58:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:58:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:58:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:58:03] 
[2025-11-26 22:58:03] 2025-11-27 03:57:15,656 | INFO     | ***************************************
[2025-11-26 22:58:03] 2025-11-27 03:57:16,159 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-26 22:58:03] 2025-11-27 03:57:16,270 | INFO     | sufficient remaining disk space (60334014464 B)
[2025-11-26 22:58:03] 2025-11-27 03:57:16,270 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:58:03] 2025-11-27 03:57:16,270 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:58:03] 2025-11-27 03:57:16,271 | INFO     | update_server=False
[2025-11-26 22:58:03] 2025-11-27 03:57:16,271 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:58:03] 2025-11-27 03:57:16,271 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:58:03] 2025-11-27 03:57:16,290 | INFO     | all job control threads have been joined
[2025-11-26 22:58:03] 2025-11-27 03:57:16,390 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 22:58:03] 2025-11-27 03:57:16,391 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 22:58:03] 2025-11-27 03:57:16,391 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:58:03] 2025-11-27 03:57:16,391 | INFO     | will abort loop
[2025-11-26 22:58:03] 2025-11-27 03:57:16,537 | INFO     | all data control threads have been joined
[2025-11-26 22:58:03] 2025-11-27 03:57:16,822 | INFO     | all payload control threads have been joined
[2025-11-26 22:58:03] 2025-11-27 03:57:17,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:58:03] 2025-11-27 03:57:17,276 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:17,285 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:17,298 | INFO     | [job] control thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:17,320 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:58:03] 2025-11-27 03:57:17,398 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:17,494 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:17,543 | INFO     | [data] control thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:17,828 | INFO     | [payload] control thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:17,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:18,062 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:18,081 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:18,279 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:18,325 | INFO     | [job] validate thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:18,402 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:18,452 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:18,607 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:21,343 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:58:03] 2025-11-27 03:57:46,484 | INFO     | PID=1423939 has CPU usage=4.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:58:03] 2025-11-27 03:57:46,484 | INFO     | .. there are 106 such processes running
[2025-11-26 22:58:03] 2025-11-27 03:57:46,485 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:58:03] 2025-11-27 03:57:46,485 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:58:03] 2025-11-27 03:57:46,485 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:58:03] 2025-11-27 03:57:55,337 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:58:03] 2025-11-27 03:57:55,669 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140174462117696)>', '<ExcThread(monitor, started 140173790648064)>']
[2025-11-26 22:58:03] 2025-11-27 03:57:56,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:58:03] 2025-11-27 03:57:56,544 | INFO     | [monitor] control thread has ended
[2025-11-26 22:58:03] 2025-11-27 03:58:00,695 | INFO     | all workflow threads have been joined
[2025-11-26 22:58:03] 2025-11-27 03:58:00,695 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:58:03] 2025-11-27 03:58:00,696 | INFO     | traces error code: 0
[2025-11-26 22:58:03] 2025-11-27 03:58:00,696 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:58:03] 2025-11-27 03:58:01,050 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:58:03] 2025-11-27 03:58:01,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:58:03] 2025-11-27 03:58:01,114 [wrapper] pilotpid: 1423939
[2025-11-26 22:58:03] 2025-11-27 03:58:01,135 [wrapper] Pilot exit status: 0
[2025-11-26 22:58:03] 2025-11-27 03:58:01,237 [wrapper] pandaids: 6896764159
[2025-11-26 22:58:03] 2025-11-27 03:58:02,188 [wrapper] cleanup supervisor_pilot 1763775 1423940
[2025-11-26 22:58:03] 2025-11-27 03:58:02,219 [wrapper] Test setup, not cleaning
[2025-11-26 22:58:03] 2025-11-27 03:58:02,257 [wrapper] apfmon messages muted
[2025-11-26 22:58:03] 2025-11-27 03:58:02,296 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:58:03] 2025-11-27 03:58:02,398 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:58:03]  *** Error codes and diagnostics ***
[2025-11-26 22:58:03]     "exeErrorCode": 0,
[2025-11-26 22:58:03]     "exeErrorDiag": "",
[2025-11-26 22:58:03]     "pilotErrorCode": 0,
[2025-11-26 22:58:03]     "pilotErrorDiag": "",
[2025-11-26 22:58:03]  *** Listing of results directory ***
[2025-11-26 22:58:03] total 1325052
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 03:00 pilot3.tar.gz
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 03:37 queuedata.json
[2025-11-26 22:58:03] -rwx------. 1 boincer umatlas     36292 Nov 25 03:38 runpilot2-wrapper.sh
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas       100 Nov 26 16:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:58:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 16:12 run_atlas
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas       105 Nov 26 16:12 job.xml
[2025-11-26 22:58:03] -rw-r--r--. 2 boincer umatlas 409499365 Nov 26 16:12 EVNT.47483658._004250.pool.root.1
[2025-11-26 22:58:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:12 start_atlas.sh
[2025-11-26 22:58:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 16:12 shared
[2025-11-26 22:58:03] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 16:12 input.tar.gz
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas         0 Nov 26 16:12 boinc_lockfile
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 16:12 pandaJob.out
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas        57 Nov 26 16:12 setup.sh.local
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas    991538 Nov 26 16:13 agis_schedconf.cvmfs.json
[2025-11-26 22:58:03] drwx------. 5 boincer umatlas      4096 Nov 26 16:13 pilot3
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas       533 Nov 26 22:48 boinc_task_state.xml
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas      7171 Nov 26 22:55 init_data.xml
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas 933764063 Nov 26 22:56 HITS.47556185._000133.pool.root.1
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas      1053 Nov 26 22:56 memory_monitor_summary.json
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas   1516240 Nov 26 22:56 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas   1672504 Nov 26 22:56 log.47556185._000133.job.log.tgz.1
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas      8591 Nov 26 22:57 heartbeat.json
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas        95 Nov 26 22:57 pilot_heartbeat.json
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas      5011 Nov 26 22:58 pilotlog.txt
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas   3159317 Nov 26 22:58 log.47556185._000133.job.log.1
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas        29 Nov 26 22:58 wrapper_checkpoint.txt
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 22:58 boinc_mmap_file
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas       353 Nov 26 22:58 output.list
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas       620 Nov 26 22:58 runtime_log
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas   4853760 Nov 26 22:58 result.tar.gz
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas       659 Nov 26 22:58 W0TKDmUk3h8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm6FMKDmmy7fJn.diag
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas      9338 Nov 26 22:58 runtime_log.err
[2025-11-26 22:58:03] -rw-r--r--. 1 boincer umatlas     21431 Nov 26 22:58 stderr.txt
[2025-11-26 22:58:03] HITS file was successfully produced:
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas 933764063 Nov 26 22:56 shared/HITS.pool.root.1
[2025-11-26 22:58:03]  *** Contents of shared directory: ***
[2025-11-26 22:58:03] total 1317128
[2025-11-26 22:58:03] -rw-r--r--. 2 boincer umatlas 409499365 Nov 26 16:12 ATLAS.root_0
[2025-11-26 22:58:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 16:12 start_atlas.sh
[2025-11-26 22:58:03] -rw-r--r--. 2 boincer umatlas    590102 Nov 26 16:12 input.tar.gz
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas 933764063 Nov 26 22:56 HITS.pool.root.1
[2025-11-26 22:58:03] -rw-------. 1 boincer umatlas   4853760 Nov 26 22:58 result.tar.gz
22:58:04 (1412908): run_atlas exited; CPU time 138588.458564
22:58:04 (1412908): called boinc_finish(0)

</stderr_txt>
]]>

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