Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:39:18 (2751220): wrapper (7.7.26015): starting
17:39:18 (2751220): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:39:18] Arguments: --nthreads 8
[2025-11-26 17:39:18] Threads: 8
[2025-11-26 17:39:18] Checking for CVMFS
[2025-11-26 17:39:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:39:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:39:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:39:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:39:18] 2.13.2.0 3460 3156 60440 153341 3 81 3218440 4096000 4140 130560 0 7454158 99.779 1349913 893 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 17:39:18] CVMFS is ok
[2025-11-26 17:39:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:39:18] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 17:39:18] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 17:39:18] Further information can be found at the LHC@home message board.
[2025-11-26 17:39:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:39:18] Checking for apptainer binary...
[2025-11-26 17:39:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:39:18] Running /usr/bin/apptainer --version
[2025-11-26 17:39:18] apptainer version 1.4.3
[2025-11-26 17:39:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:39:18] painter
[2025-11-26 17:39:18] apptainer works
[2025-11-26 17:39:18] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:39:18] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:39:18] Starting ATLAS job with PandaID=6891570525
[2025-11-26 17:39:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:41:56]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:41:56] 2025-11-27 04:40:46,829 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:41:56] 2025-11-27 04:40:47,585 | INFO     | time since job start (14481s) is within the limit (172800.0s)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,008 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 21:41:56] 2025-11-27 04:40:48,011 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4674.32215625
[2025-11-26 21:41:56] 2025-11-27 04:40:48,014 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6891570525/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,014 | INFO     | extracted standard info from prmon json
[2025-11-26 21:41:56] 2025-11-27 04:40:48,014 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:41:56] 2025-11-27 04:40:48,014 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:41:56] 2025-11-27 04:40:48,016 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:41:56] 2025-11-27 04:40:48,016 | INFO     | sum of square deviations: 4127751674.050633
[2025-11-26 21:41:56] 2025-11-27 04:40:48,017 | INFO     | sum of deviations: 87373904854.60764
[2025-11-26 21:41:56] 2025-11-27 04:40:48,017 | INFO     | mean x: 1764211183.063291
[2025-11-26 21:41:56] 2025-11-27 04:40:48,017 | INFO     | mean y: 2858988.4261603374
[2025-11-26 21:41:56] 2025-11-27 04:40:48,017 | INFO     | intersect: -37340962109.49872
[2025-11-26 21:41:56] 2025-11-27 04:40:48,017 | INFO     | chi2: 3.3636218601252033
[2025-11-26 21:41:56] 2025-11-27 04:40:48,017 | INFO     | sum of square deviations: 3871974709.0301557
[2025-11-26 21:41:56] 2025-11-27 04:40:48,018 | INFO     | sum of deviations: 122246408627.52583
[2025-11-26 21:41:56] 2025-11-27 04:40:48,018 | INFO     | mean x: 1764211030.564655
[2025-11-26 21:41:56] 2025-11-27 04:40:48,018 | INFO     | mean y: 2879554.6982758623
[2025-11-26 21:41:56] 2025-11-27 04:40:48,018 | INFO     | intersect: -55696983888.26711
[2025-11-26 21:41:56] 2025-11-27 04:40:48,018 | INFO     | chi2: 2.18429342359764
[2025-11-26 21:41:56] 2025-11-27 04:40:48,018 | INFO     | current chi2=2.18429342359764 (change=35.061266859636405 %)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,019 | INFO     | sum of square deviations: 3626988644.0087943
[2025-11-26 21:41:56] 2025-11-27 04:40:48,019 | INFO     | sum of deviations: 117305464704.54625
[2025-11-26 21:41:56] 2025-11-27 04:40:48,019 | INFO     | mean x: 1764210878.0660794
[2025-11-26 21:41:56] 2025-11-27 04:40:48,019 | INFO     | mean y: 2876479.0969163
[2025-11-26 21:41:56] 2025-11-27 04:40:48,020 | INFO     | intersect: -57055911733.60067
[2025-11-26 21:41:56] 2025-11-27 04:40:48,020 | INFO     | chi2: 2.185141844690899
[2025-11-26 21:41:56] 2025-11-27 04:40:48,020 | INFO     | current chi2=2.185141844690899 (change=-0.03884190118841712 %)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,020 | INFO     | right removable region: 226
[2025-11-26 21:41:56] 2025-11-27 04:40:48,020 | INFO     | sum of square deviations: 3871965559.0301557
[2025-11-26 21:41:56] 2025-11-27 04:40:48,021 | INFO     | sum of deviations: 26449742967.33618
[2025-11-26 21:41:56] 2025-11-27 04:40:48,021 | INFO     | mean x: 1764211335.564655
[2025-11-26 21:41:56] 2025-11-27 04:40:48,021 | INFO     | mean y: 2895109.577586207
[2025-11-26 21:41:56] 2025-11-27 04:40:48,021 | INFO     | intersect: -12048590280.554361
[2025-11-26 21:41:56] 2025-11-27 04:40:48,021 | INFO     | chi2: 1.2394501049210906
[2025-11-26 21:41:56] 2025-11-27 04:40:48,021 | INFO     | current chi2=1.2394501049210906 (change=63.15132448107722 %)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,021 | INFO     | sum of square deviations: 3626970344.0087943
[2025-11-26 21:41:56] 2025-11-27 04:40:48,022 | INFO     | sum of deviations: 19833431324.405327
[2025-11-26 21:41:56] 2025-11-27 04:40:48,022 | INFO     | mean x: 1764211488.0660794
[2025-11-26 21:41:56] 2025-11-27 04:40:48,022 | INFO     | mean y: 2899214.039647577
[2025-11-26 21:41:56] 2025-11-27 04:40:48,022 | INFO     | intersect: -9644372219.564516
[2025-11-26 21:41:56] 2025-11-27 04:40:48,022 | INFO     | chi2: 1.2296115436936454
[2025-11-26 21:41:56] 2025-11-27 04:40:48,022 | INFO     | current chi2=1.2296115436936454 (change=0.7937843716646881 %)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,022 | INFO     | left removable region: 20
[2025-11-26 21:41:56] 2025-11-27 04:40:48,022 | INFO     | sum of square deviations: 2710611842.548531
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | sum of deviations: 45058150523.286415
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | mean x: 1764211457.5679612
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | mean y: 2923005.800970874
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | intersect: -29323336166.469463
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | chi2: 0.02227794551577521
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | current memory leak: 16.62 B/s (using 206 data points, chi2=0.02)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | could have reported an average CPU frequency of 4638 MHz (11 samples)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | ..............................
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | . Timing measurements:
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | . get job = 0 s
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | . initial setup = 3 s
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | . payload setup = 3 s
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | . stage-in = 0 s
[2025-11-26 21:41:56] 2025-11-27 04:40:48,023 | INFO     | . payload execution = 14453 s
[2025-11-26 21:41:56] 2025-11-27 04:40:48,024 | INFO     | . stage-out = 3 s
[2025-11-26 21:41:56] 2025-11-27 04:40:48,024 | INFO     | . log creation = 0 s
[2025-11-26 21:41:56] 2025-11-27 04:40:48,024 | INFO     | ..............................
[2025-11-26 21:41:56] 2025-11-27 04:40:48,151 | INFO     | 
[2025-11-26 21:41:56] 2025-11-27 04:40:48,151 | INFO     | job summary report
[2025-11-26 21:41:56] 2025-11-27 04:40:48,151 | INFO     | --------------------------------------------------
[2025-11-26 21:41:56] 2025-11-27 04:40:48,151 | INFO     | PanDA job id: 6891570525
[2025-11-26 21:41:56] 2025-11-27 04:40:48,151 | INFO     | task id: 47493068
[2025-11-26 21:41:56] 2025-11-27 04:40:48,151 | INFO     | errors: (none)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,151 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:41:56] 2025-11-27 04:40:48,151 | INFO     | pilot state: finished 
[2025-11-26 21:41:56] 2025-11-27 04:40:48,151 | INFO     | transexitcode: 0
[2025-11-26 21:41:56] 2025-11-27 04:40:48,151 | INFO     | exeerrorcode: 0
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | exeerrordiag: 
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | exitcode: 0
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | exitmsg: OK
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | cpuconsumptiontime: 102671 s
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | nevents: 1000
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | neventsw: 0
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | pid: 2761739
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | pgrp: 2761739
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | corecount: 8
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | event service: False
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | sizes: {0: 2284311, 2: 2284573, 11: 2284601, 14459: 2316461, 14463: 2325497, 14465: 2325553, 14469: 2325927}
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | --------------------------------------------------
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | 
[2025-11-26 21:41:56] 2025-11-27 04:40:48,152 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-26 21:41:56] 2025-11-27 04:40:48,163 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,163 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | job 6891570525 has completed (purged errors)
[2025-11-26 21:41:56] 2025-11-27 04:40:48,164 | INFO     | overall cleanup function is called
[2025-11-26 21:41:56] 2025-11-27 04:40:49,176 | INFO     | --- collectZombieJob: --- 10, [2761739]
[2025-11-26 21:41:56] 2025-11-27 04:40:49,176 | INFO     | zombie collector waiting for pid 2761739
[2025-11-26 21:41:56] 2025-11-27 04:40:49,176 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:41:56] 2025-11-27 04:40:49,176 | INFO     | collected zombie processes
[2025-11-26 21:41:56] 2025-11-27 04:40:49,176 | INFO     | will attempt to kill all subprocesses of pid=2761739
[2025-11-26 21:41:56] 2025-11-27 04:40:49,247 | INFO     | process IDs to be killed: [2761739] (in reverse order)
[2025-11-26 21:41:56] 2025-11-27 04:40:49,286 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:41:56] 2025-11-27 04:40:49,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:41:56] 2025-11-27 04:40:49,289 | INFO     | did not find any defunct processes belonging to 2761739
[2025-11-26 21:41:56] 2025-11-27 04:40:49,291 | INFO     | did not find any defunct processes belonging to 2761739
[2025-11-26 21:41:56] 2025-11-27 04:40:49,292 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:41:56] 2025-11-27 04:40:49,292 | INFO     | ready for new job
[2025-11-26 21:41:56] 2025-11-27 04:40:49,292 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:41:56] 2025-11-27 04:40:49,293 | INFO     | ***************************************
[2025-11-26 21:41:56] 2025-11-27 04:40:49,293 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:41:56] 2025-11-27 04:40:49,293 | INFO     | ***************************************
[2025-11-26 21:41:56] 2025-11-27 04:40:49,294 | INFO     | 
[2025-11-26 21:41:56] 2025-11-27 04:40:49,294 | INFO     | architecture information:
[2025-11-26 21:41:56] 2025-11-27 04:40:49,295 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:41:56] 2025-11-27 04:40:49,304 | INFO     | cat /etc/os-release:
[2025-11-26 21:41:56] NAME="CentOS Linux"
[2025-11-26 21:41:56] VERSION="7 (Core)"
[2025-11-26 21:41:56] ID="centos"
[2025-11-26 21:41:56] ID_LIKE="rhel fedora"
[2025-11-26 21:41:56] VERSION_ID="7"
[2025-11-26 21:41:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:41:56] ANSI_COLOR="0;31"
[2025-11-26 21:41:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:41:56] HOME_URL="https://www.centos.org/"
[2025-11-26 21:41:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:41:56] 
[2025-11-26 21:41:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:41:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:41:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:41:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:41:56] 
[2025-11-26 21:41:56] 2025-11-27 04:40:49,305 | INFO     | ***************************************
[2025-11-26 21:41:56] 2025-11-27 04:40:49,807 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-26 21:41:56] 2025-11-27 04:40:49,819 | INFO     | sufficient remaining disk space (184969854976 B)
[2025-11-26 21:41:56] 2025-11-27 04:40:49,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:41:56] 2025-11-27 04:40:49,820 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:41:56] 2025-11-27 04:40:49,820 | INFO     | update_server=False
[2025-11-26 21:41:56] 2025-11-27 04:40:49,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:41:56] 2025-11-27 04:40:49,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:41:56] 2025-11-27 04:40:49,859 | INFO     | all payload control threads have been joined
[2025-11-26 21:41:56] 2025-11-27 04:40:50,093 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:41:56] 2025-11-27 04:40:50,340 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:41:56] 2025-11-27 04:40:50,340 | INFO     | aborting loop
[2025-11-26 21:41:56] 2025-11-27 04:40:50,793 | INFO     | all data control threads have been joined
[2025-11-26 21:41:56] 2025-11-27 04:40:50,823 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:50,825 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:50,864 | INFO     | [payload] control thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:50,890 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:41:56] 2025-11-27 04:40:51,105 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:51,116 | INFO     | all job control threads have been joined
[2025-11-26 21:41:56] 2025-11-27 04:40:51,224 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:51,345 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:51,691 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:51,761 | INFO     | [job] validate thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:51,771 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:51,799 | INFO     | [data] control thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:51,874 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:51,898 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:52,121 | INFO     | [job] control thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:52,896 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:40:54,097 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:41:00,224 | INFO     | job.realtimelogging is not enabled
[2025-11-26 21:41:56] 2025-11-27 04:41:01,229 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:41:56] 2025-11-27 04:41:20,744 | INFO     | PID=2755069 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 21:41:56] 2025-11-27 04:41:20,744 | INFO     | .. there are 4 such processes running
[2025-11-26 21:41:56] 2025-11-27 04:41:20,744 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:41:56] 2025-11-27 04:41:20,744 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:41:56] 2025-11-27 04:41:20,744 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:41:56] 2025-11-27 04:41:49,892 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:41:56] 2025-11-27 04:41:51,425 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127736710915904)>', '<ExcThread(monitor, started 127735951259392)>']
[2025-11-26 21:41:56] 2025-11-27 04:41:51,895 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:41:56] 2025-11-27 04:41:51,895 | INFO     | [monitor] control thread has ended
[2025-11-26 21:41:56] 2025-11-27 04:41:56,452 | INFO     | all workflow threads have been joined
[2025-11-26 21:41:56] 2025-11-27 04:41:56,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:41:56] 2025-11-27 04:41:56,452 | INFO     | traces error code: 0
[2025-11-26 21:41:56] 2025-11-27 04:41:56,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:41:56] 2025-11-27 04:41:56,508 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:41:56] 2025-11-27 04:41:56,509 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:41:56] 2025-11-27 04:41:56,510 [wrapper] pilotpid: 2755069
[2025-11-26 21:41:56] 2025-11-27 04:41:56,511 [wrapper] Pilot exit status: 0
[2025-11-26 21:41:56] 2025-11-27 04:41:56,516 [wrapper] pandaids: 6891570525
[2025-11-26 21:41:56] 2025-11-27 04:41:56,539 [wrapper] cleanup supervisor_pilot 2958144 2755070
[2025-11-26 21:41:56] 2025-11-27 04:41:56,540 [wrapper] Test setup, not cleaning
[2025-11-26 21:41:56] 2025-11-27 04:41:56,542 [wrapper] apfmon messages muted
[2025-11-26 21:41:56] 2025-11-27 04:41:56,543 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:41:56] 2025-11-27 04:41:56,547 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:41:56]  *** Error codes and diagnostics ***
[2025-11-26 21:41:56]     "exeErrorCode": 0,
[2025-11-26 21:41:56]     "exeErrorDiag": "",
[2025-11-26 21:41:56]     "pilotErrorCode": 0,
[2025-11-26 21:41:56]     "pilotErrorDiag": "",
[2025-11-26 21:41:56]  *** Listing of results directory ***
[2025-11-26 21:41:56] total 1283248
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc    576529 Nov 18 08:15 pilot3.tar.gz
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc      5112 Nov 18 08:39 queuedata.json
[2025-11-26 21:41:56] -rwx------ 1 boinc boinc     36292 Nov 18 08:40 runpilot2-wrapper.sh
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc       100 Nov 26 17:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:41:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 17:39 run_atlas
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc       105 Nov 26 17:39 job.xml
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc      9935 Nov 26 17:39 init_data.xml
[2025-11-26 21:41:56] -rw-r--r-- 2 boinc boinc 408682535 Nov 26 17:39 EVNT.47493065._000239.pool.root.1
[2025-11-26 21:41:56] -rw-r--r-- 2 boinc boinc     15120 Nov 26 17:39 start_atlas.sh
[2025-11-26 21:41:56] drwxrwx--x 2 boinc boinc      4096 Nov 26 17:39 shared
[2025-11-26 21:41:56] -rw-r--r-- 2 boinc boinc    590099 Nov 26 17:39 input.tar.gz
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc         0 Nov 26 17:39 boinc_lockfile
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc      2773 Nov 26 17:39 pandaJob.out
[2025-11-26 21:41:56] -rw------- 1 boinc boinc    991546 Nov 26 17:39 agis_schedconf.cvmfs.json
[2025-11-26 21:41:56] drwx------ 5 boinc boinc      4096 Nov 26 17:39 pilot3
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc       532 Nov 26 21:36 boinc_task_state.xml
[2025-11-26 21:41:56] -rw------- 1 boinc boinc 894104295 Nov 26 21:40 HITS.47493068._002382.pool.root.1
[2025-11-26 21:41:56] -rw------- 1 boinc boinc      1036 Nov 26 21:40 memory_monitor_summary.json
[2025-11-26 21:41:56] -rw------- 1 boinc boinc   1516240 Nov 26 21:40 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:41:56] -rw------- 1 boinc boinc   1555871 Nov 26 21:40 log.47493068._002382.job.log.tgz.1
[2025-11-26 21:41:56] -rw------- 1 boinc boinc      8553 Nov 26 21:40 heartbeat.json
[2025-11-26 21:41:56] -rw------- 1 boinc boinc        95 Nov 26 21:41 pilot_heartbeat.json
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc      8192 Nov 26 21:41 boinc_mmap_file
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc        29 Nov 26 21:41 wrapper_checkpoint.txt
[2025-11-26 21:41:56] -rw------- 1 boinc boinc      4903 Nov 26 21:41 pilotlog.txt
[2025-11-26 21:41:56] -rw------- 1 boinc boinc   2112102 Nov 26 21:41 log.47493068._002382.job.log.1
[2025-11-26 21:41:56] -rw------- 1 boinc boinc       353 Nov 26 21:41 output.list
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc       620 Nov 26 21:41 runtime_log
[2025-11-26 21:41:56] -rw------- 1 boinc boinc   3686400 Nov 26 21:41 result.tar.gz
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc      8795 Nov 26 21:41 runtime_log.err
[2025-11-26 21:41:56] -rw------- 1 boinc boinc       663 Nov 26 21:41 7JaKDmkzcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm8cFKDm42lEKn.diag
[2025-11-26 21:41:56] -rw-r--r-- 1 boinc boinc     21372 Nov 26 21:41 stderr.txt
[2025-11-26 21:41:56] HITS file was successfully produced:
[2025-11-26 21:41:56] -rw------- 1 boinc boinc 894104295 Nov 26 21:40 shared/HITS.pool.root.1
[2025-11-26 21:41:56]  *** Contents of shared directory: ***
[2025-11-26 21:41:56] total 1276464
[2025-11-26 21:41:56] -rw-r--r-- 2 boinc boinc 408682535 Nov 26 17:39 ATLAS.root_0
[2025-11-26 21:41:56] -rw-r--r-- 2 boinc boinc     15120 Nov 26 17:39 start_atlas.sh
[2025-11-26 21:41:56] -rw-r--r-- 2 boinc boinc    590099 Nov 26 17:39 input.tar.gz
[2025-11-26 21:41:56] -rw------- 1 boinc boinc 894104295 Nov 26 21:40 HITS.pool.root.1
[2025-11-26 21:41:56] -rw------- 1 boinc boinc   3686400 Nov 26 21:41 result.tar.gz
21:41:58 (2751220): run_atlas exited; CPU time 102528.143286
21:41:58 (2751220): called boinc_finish(0)

</stderr_txt>
]]>

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