Stderr output

<core_client_version>7.24.5</core_client_version>
<![CDATA[
<stderr_txt>
19:18:59 (4151693): wrapper (7.7.26015): starting
19:18:59 (4151693): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:18:59] Arguments: --nthreads 8
[2025-11-26 19:18:59] Threads: 8
[2025-11-26 19:18:59] Checking for CVMFS
[2025-11-26 19:18:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:18:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:18:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:18:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:18:59] 2.11.3.0 1658007 5016 83424 153343 3 81 3199017 4096000 2585 130560 0 8165984 99.910 649301 712 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 19:18:59] CVMFS is ok
[2025-11-26 19:18:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:18:59] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 19:18:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 19:18:59] Further information can be found at the LHC@home message board.
[2025-11-26 19:18:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:18:59] Checking for apptainer binary...
[2025-11-26 19:18:59] apptainer is not installed, using version from CVMFS
[2025-11-26 19:18:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:18:59] officedc-System-Product-Name
[2025-11-26 19:18:59] apptainer works
[2025-11-26 19:18:59] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:18:59] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:18:59] Starting ATLAS job with PandaID=6893864527
[2025-11-26 19:18:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:54:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:54:48] 2025-11-27 07:54:10,193 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6893864527/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:54:48] 2025-11-27 07:54:10,193 | INFO     | extracted standard info from prmon json
[2025-11-27 00:54:48] 2025-11-27 07:54:10,193 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:54:48] 2025-11-27 07:54:10,193 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:54:48] 2025-11-27 07:54:10,197 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:54:48] 2025-11-27 07:54:10,198 | INFO     | sum of square deviations: 11042172241.829832
[2025-11-27 00:54:48] 2025-11-27 07:54:10,200 | INFO     | sum of deviations: 157466033770.04266
[2025-11-27 00:54:48] 2025-11-27 07:54:10,200 | INFO     | mean x: 1764219973.2765958
[2025-11-27 00:54:48] 2025-11-27 07:54:10,200 | INFO     | mean y: 2862658.6808510637
[2025-11-27 00:54:48] 2025-11-27 07:54:10,200 | INFO     | intersect: -25155658310.352715
[2025-11-27 00:54:48] 2025-11-27 07:54:10,200 | INFO     | chi2: 3.728964354680377
[2025-11-27 00:54:48] 2025-11-27 07:54:10,201 | INFO     | sum of square deviations: 10546358141.441334
[2025-11-27 00:54:48] 2025-11-27 07:54:10,202 | INFO     | sum of deviations: 225089925783.66058
[2025-11-27 00:54:48] 2025-11-27 07:54:10,202 | INFO     | mean x: 1764219820.7808642
[2025-11-27 00:54:48] 2025-11-27 07:54:10,203 | INFO     | mean y: 2883376.783950617
[2025-11-27 00:54:48] 2025-11-27 07:54:10,203 | INFO     | intersect: -37650693640.02655
[2025-11-27 00:54:48] 2025-11-27 07:54:10,203 | INFO     | chi2: 2.232159726983205
[2025-11-27 00:54:48] 2025-11-27 07:54:10,203 | INFO     | current chi2=2.232159726983205 (change=40.13995536906838 %)
[2025-11-27 00:54:48] 2025-11-27 07:54:10,203 | INFO     | sum of square deviations: 10065594326.608185
[2025-11-27 00:54:48] 2025-11-27 07:54:10,205 | INFO     | sum of deviations: 219988016749.95926
[2025-11-27 00:54:48] 2025-11-27 07:54:10,205 | INFO     | mean x: 1764219668.2821317
[2025-11-27 00:54:48] 2025-11-27 07:54:10,205 | INFO     | mean y: 2881751.5893416926
[2025-11-27 00:54:48] 2025-11-27 07:54:10,205 | INFO     | intersect: -38554919540.948746
[2025-11-27 00:54:48] 2025-11-27 07:54:10,206 | INFO     | chi2: 2.2274614206856045
[2025-11-27 00:54:48] 2025-11-27 07:54:10,206 | INFO     | current chi2=2.2274614206856045 (change=0.2104825313711 %)
[2025-11-27 00:54:48] 2025-11-27 07:54:10,206 | INFO     | right removable region: 318
[2025-11-27 00:54:48] 2025-11-27 07:54:10,206 | INFO     | sum of square deviations: 10546302631.44133
[2025-11-27 00:54:48] 2025-11-27 07:54:10,208 | INFO     | sum of deviations: 70984760585.93523
[2025-11-27 00:54:48] 2025-11-27 07:54:10,208 | INFO     | mean x: 1764220125.7808642
[2025-11-27 00:54:48] 2025-11-27 07:54:10,208 | INFO     | mean y: 2889153.7314814813
[2025-11-27 00:54:48] 2025-11-27 07:54:10,208 | INFO     | intersect: -11871674627.141932
[2025-11-27 00:54:48] 2025-11-27 07:54:10,208 | INFO     | chi2: 1.5714246602269004
[2025-11-27 00:54:48] 2025-11-27 07:54:10,208 | INFO     | current chi2=1.5714246602269004 (change=57.85895195660585 %)
[2025-11-27 00:54:48] 2025-11-27 07:54:10,209 | INFO     | sum of square deviations: 10065582369.272718
[2025-11-27 00:54:48] 2025-11-27 07:54:10,210 | INFO     | sum of deviations: 57226299208.09094
[2025-11-27 00:54:48] 2025-11-27 07:54:10,211 | INFO     | mean x: 1764220278.2727273
[2025-11-27 00:54:48] 2025-11-27 07:54:10,211 | INFO     | mean y: 2893511.3667711597
[2025-11-27 00:54:48] 2025-11-27 07:54:10,211 | INFO     | intersect: -10027305816.355915
[2025-11-27 00:54:48] 2025-11-27 07:54:10,211 | INFO     | chi2: 1.5466334903592478
[2025-11-27 00:54:48] 2025-11-27 07:54:10,211 | INFO     | current chi2=1.5466334903592478 (change=1.5776238272901346 %)
[2025-11-27 00:54:48] 2025-11-27 07:54:10,211 | INFO     | left removable region: 20
[2025-11-27 00:54:48] 2025-11-27 07:54:10,211 | INFO     | sum of square deviations: 8205681049.936252
[2025-11-27 00:54:48] 2025-11-27 07:54:10,213 | INFO     | sum of deviations: 103529083313.18123
[2025-11-27 00:54:48] 2025-11-27 07:54:10,213 | INFO     | mean x: 1764220247.7751677
[2025-11-27 00:54:48] 2025-11-27 07:54:10,213 | INFO     | mean y: 2919739.375838926
[2025-11-27 00:54:48] 2025-11-27 07:54:10,213 | INFO     | intersect: -22255818310.90891
[2025-11-27 00:54:48] 2025-11-27 07:54:10,213 | INFO     | chi2: 0.020710808920136988
[2025-11-27 00:54:48] 2025-11-27 07:54:10,213 | INFO     | current memory leak: 12.62 B/s (using 298 data points, chi2=0.02)
[2025-11-27 00:54:48] 2025-11-27 07:54:10,214 | INFO     | could have reported an average CPU frequency of 3947 MHz (15 samples)
[2025-11-27 00:54:48] 2025-11-27 07:54:10,214 | INFO     | ..............................
[2025-11-27 00:54:48] 2025-11-27 07:54:10,214 | INFO     | . Timing measurements:
[2025-11-27 00:54:48] 2025-11-27 07:54:10,214 | INFO     | . get job = 0 s
[2025-11-27 00:54:48] 2025-11-27 07:54:10,214 | INFO     | . initial setup = 3 s
[2025-11-27 00:54:48] 2025-11-27 07:54:10,214 | INFO     | . payload setup = 3 s
[2025-11-27 00:54:48] 2025-11-27 07:54:10,214 | INFO     | . stage-in = 0 s
[2025-11-27 00:54:48] 2025-11-27 07:54:10,214 | INFO     | . payload execution = 20071 s
[2025-11-27 00:54:48] 2025-11-27 07:54:10,214 | INFO     | . stage-out = 2 s
[2025-11-27 00:54:48] 2025-11-27 07:54:10,215 | INFO     | . log creation = 0 s
[2025-11-27 00:54:48] 2025-11-27 07:54:10,215 | INFO     | ..............................
[2025-11-27 00:54:48] 2025-11-27 07:54:10,289 | INFO     | PID=4155563 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 00:54:48] 2025-11-27 07:54:10,289 | INFO     | .. there are 3 such processes running
[2025-11-27 00:54:48] 2025-11-27 07:54:10,577 | INFO     | 
[2025-11-27 00:54:48] 2025-11-27 07:54:10,577 | INFO     | job summary report
[2025-11-27 00:54:48] 2025-11-27 07:54:10,577 | INFO     | --------------------------------------------------
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | PanDA job id: 6893864527
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | task id: 47523449
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | errors: (none)
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | pilot state: finished 
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | transexitcode: 0
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | exeerrorcode: 0
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | exeerrordiag: 
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | exitcode: 0
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | exitmsg: OK
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | cpuconsumptiontime: 151220 s
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | nevents: 1000
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | neventsw: 0
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | pid: 4162265
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | pgrp: 4162265
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | corecount: 8
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | event service: False
[2025-11-27 00:54:48] 2025-11-27 07:54:10,578 | INFO     | sizes: {0: 2284316, 3: 2284578, 11: 2284606, 20079: 2318967, 20082: 2327975, 20085: 2328031, 20088: 2328405}
[2025-11-27 00:54:48] 2025-11-27 07:54:10,579 | INFO     | --------------------------------------------------
[2025-11-27 00:54:48] 2025-11-27 07:54:10,579 | INFO     | 
[2025-11-27 00:54:48] 2025-11-27 07:54:10,579 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,595 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,595 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,595 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,595 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:54:48] 2025-11-27 07:54:10,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,595 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:54:48] 2025-11-27 07:54:10,595 | INFO     | job 6893864527 has completed (purged errors)
[2025-11-27 00:54:48] 2025-11-27 07:54:10,595 | INFO     | overall cleanup function is called
[2025-11-27 00:54:48] 2025-11-27 07:54:11,609 | INFO     | --- collectZombieJob: --- 10, [4162265]
[2025-11-27 00:54:48] 2025-11-27 07:54:11,609 | INFO     | zombie collector waiting for pid 4162265
[2025-11-27 00:54:48] 2025-11-27 07:54:11,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:54:48] 2025-11-27 07:54:11,610 | INFO     | collected zombie processes
[2025-11-27 00:54:48] 2025-11-27 07:54:11,610 | INFO     | will attempt to kill all subprocesses of pid=4162265
[2025-11-27 00:54:48] 2025-11-27 07:54:11,744 | INFO     | process IDs to be killed: [4162265] (in reverse order)
[2025-11-27 00:54:48] 2025-11-27 07:54:11,798 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:54:48] 2025-11-27 07:54:11,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:54:48] 2025-11-27 07:54:11,802 | INFO     | did not find any defunct processes belonging to 4162265
[2025-11-27 00:54:48] 2025-11-27 07:54:11,805 | INFO     | did not find any defunct processes belonging to 4162265
[2025-11-27 00:54:48] 2025-11-27 07:54:11,806 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:54:48] 2025-11-27 07:54:11,806 | INFO     | ready for new job
[2025-11-27 00:54:48] 2025-11-27 07:54:11,806 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:54:48] 2025-11-27 07:54:11,808 | INFO     | ***************************************
[2025-11-27 00:54:48] 2025-11-27 07:54:11,808 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:54:48] 2025-11-27 07:54:11,809 | INFO     | ***************************************
[2025-11-27 00:54:48] 2025-11-27 07:54:11,809 | INFO     | 
[2025-11-27 00:54:48] 2025-11-27 07:54:11,810 | INFO     | architecture information:
[2025-11-27 00:54:48] 2025-11-27 07:54:11,810 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:54:48] 2025-11-27 07:54:11,820 | INFO     | cat /etc/os-release:
[2025-11-27 00:54:48] NAME="CentOS Linux"
[2025-11-27 00:54:48] VERSION="7 (Core)"
[2025-11-27 00:54:48] ID="centos"
[2025-11-27 00:54:48] ID_LIKE="rhel fedora"
[2025-11-27 00:54:48] VERSION_ID="7"
[2025-11-27 00:54:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:54:48] ANSI_COLOR="0;31"
[2025-11-27 00:54:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:54:48] HOME_URL="https://www.centos.org/"
[2025-11-27 00:54:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:54:48] 
[2025-11-27 00:54:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:54:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:54:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:54:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:54:48] 
[2025-11-27 00:54:48] 2025-11-27 07:54:11,820 | INFO     | ***************************************
[2025-11-27 00:54:48] 2025-11-27 07:54:12,323 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-27 00:54:48] 2025-11-27 07:54:12,335 | INFO     | sufficient remaining disk space (379908521984 B)
[2025-11-27 00:54:48] 2025-11-27 07:54:12,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:54:48] 2025-11-27 07:54:12,335 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:54:48] 2025-11-27 07:54:12,336 | INFO     | update_server=False
[2025-11-27 00:54:48] 2025-11-27 07:54:12,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:54:48] 2025-11-27 07:54:12,336 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:54:48] 2025-11-27 07:54:12,477 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 00:54:48] 2025-11-27 07:54:12,478 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 00:54:48] 2025-11-27 07:54:12,478 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:54:48] 2025-11-27 07:54:12,478 | INFO     | will abort loop
[2025-11-27 00:54:48] 2025-11-27 07:54:12,887 | INFO     | all payload control threads have been joined
[2025-11-27 00:54:48] 2025-11-27 07:54:12,924 | INFO     | all data control threads have been joined
[2025-11-27 00:54:48] 2025-11-27 07:54:13,340 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:13,359 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:13,483 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:13,527 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:13,540 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:54:48] 2025-11-27 07:54:13,722 | INFO     | all job control threads have been joined
[2025-11-27 00:54:48] 2025-11-27 07:54:13,891 | INFO     | [payload] control thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:13,929 | INFO     | [data] control thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:14,088 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:14,096 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:14,340 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:14,611 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:14,727 | INFO     | [job] control thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:14,772 | INFO     | [job] validate thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:14,772 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:15,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:54:48] 2025-11-27 07:54:16,293 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:17,546 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:22,497 | INFO     | job.realtimelogging is not enabled
[2025-11-27 00:54:48] 2025-11-27 07:54:23,502 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:54:48] 2025-11-27 07:54:41,708 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:54:48] 2025-11-27 07:54:42,501 | INFO     | PID=4155563 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 00:54:48] 2025-11-27 07:54:42,501 | INFO     | .. there are 4 such processes running
[2025-11-27 00:54:48] 2025-11-27 07:54:42,501 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:54:48] 2025-11-27 07:54:42,501 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:54:48] 2025-11-27 07:54:42,501 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:54:48] 2025-11-27 07:54:42,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136599175620416)>', '<ExcThread(monitor, started 136598347839232)>']
[2025-11-27 00:54:48] 2025-11-27 07:54:43,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:54:48] 2025-11-27 07:54:43,507 | INFO     | [monitor] control thread has ended
[2025-11-27 00:54:48] 2025-11-27 07:54:47,907 | INFO     | all workflow threads have been joined
[2025-11-27 00:54:48] 2025-11-27 07:54:47,907 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:54:48] 2025-11-27 07:54:47,908 | INFO     | traces error code: 0
[2025-11-27 00:54:48] 2025-11-27 07:54:47,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:54:48] 2025-11-27 07:54:47,981 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:54:48] 2025-11-27 07:54:47,983 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:54:48] 2025-11-27 07:54:47,985 [wrapper] pilotpid: 4155563
[2025-11-27 00:54:48] 2025-11-27 07:54:47,987 [wrapper] Pilot exit status: 0
[2025-11-27 00:54:48] 2025-11-27 07:54:47,992 [wrapper] pandaids: 6893864527
[2025-11-27 00:54:48] 2025-11-27 07:54:48,020 [wrapper] cleanup supervisor_pilot  120231 4155564
[2025-11-27 00:54:48] 2025-11-27 07:54:48,021 [wrapper] Test setup, not cleaning
[2025-11-27 00:54:48] 2025-11-27 07:54:48,023 [wrapper] apfmon messages muted
[2025-11-27 00:54:48] 2025-11-27 07:54:48,025 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:54:48] 2025-11-27 07:54:48,027 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:54:48]  *** Error codes and diagnostics ***
[2025-11-27 00:54:48]     "exeErrorCode": 0,
[2025-11-27 00:54:48]     "exeErrorDiag": "",
[2025-11-27 00:54:48]     "pilotErrorCode": 0,
[2025-11-27 00:54:48]     "pilotErrorDiag": "",
[2025-11-27 00:54:48]  *** Listing of results directory ***
[2025-11-27 00:54:48] total 1293124
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc    576529 Nov 20 07:06 pilot3.tar.gz
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc      5112 Nov 20 07:23 queuedata.json
[2025-11-27 00:54:48] -rwx------ 1 boinc boinc     36292 Nov 20 07:24 runpilot2-wrapper.sh
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc       100 Nov 26 19:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:54:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 19:18 run_atlas
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc       105 Nov 26 19:18 job.xml
[2025-11-27 00:54:48] -rw-r--r-- 2 boinc boinc 408487146 Nov 26 19:18 EVNT.47493127._000612.pool.root.1
[2025-11-27 00:54:48] -rw-r--r-- 2 boinc boinc     15847 Nov 26 19:18 start_atlas.sh
[2025-11-27 00:54:48] drwxrwx--x 2 boinc boinc      4096 Nov 26 19:18 shared
[2025-11-27 00:54:48] -rw-r--r-- 2 boinc boinc    590100 Nov 26 19:18 input.tar.gz
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc      9772 Nov 26 19:18 init_data.xml
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc         0 Nov 26 19:18 boinc_lockfile
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc      2783 Nov 26 19:18 pandaJob.out
[2025-11-27 00:54:48] -rw------- 1 boinc boinc    991554 Nov 26 19:19 agis_schedconf.cvmfs.json
[2025-11-27 00:54:48] drwx------ 5 boinc boinc      4096 Nov 26 19:19 pilot3
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc       533 Nov 27 00:48 boinc_task_state.xml
[2025-11-27 00:54:48] -rw------- 1 boinc boinc 902676018 Nov 27 00:53 HITS.47523449._006111.pool.root.1
[2025-11-27 00:54:48] -rw------- 1 boinc boinc        95 Nov 27 00:53 pilot_heartbeat.json
[2025-11-27 00:54:48] -rw------- 1 boinc boinc      1036 Nov 27 00:53 memory_monitor_summary.json
[2025-11-27 00:54:48] -rw------- 1 boinc boinc   1516240 Nov 27 00:54 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:54:48] -rw------- 1 boinc boinc   1635218 Nov 27 00:54 log.47523449._006111.job.log.tgz.1
[2025-11-27 00:54:48] -rw------- 1 boinc boinc      8594 Nov 27 00:54 heartbeat.json
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc      8192 Nov 27 00:54 boinc_mmap_file
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc        29 Nov 27 00:54 wrapper_checkpoint.txt
[2025-11-27 00:54:48] -rw------- 1 boinc boinc      5089 Nov 27 00:54 pilotlog.txt
[2025-11-27 00:54:48] -rw------- 1 boinc boinc   2899523 Nov 27 00:54 log.47523449._006111.job.log.1
[2025-11-27 00:54:48] -rw------- 1 boinc boinc       353 Nov 27 00:54 output.list
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc       620 Nov 27 00:54 runtime_log
[2025-11-27 00:54:48] -rw------- 1 boinc boinc   4556800 Nov 27 00:54 result.tar.gz
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc      8968 Nov 27 00:54 runtime_log.err
[2025-11-27 00:54:48] -rw------- 1 boinc boinc       663 Nov 27 00:54 jSLMDmNlKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmonGKDmfeOX8n.diag
[2025-11-27 00:54:48] -rw-r--r-- 1 boinc boinc     21488 Nov 27 00:54 stderr.txt
[2025-11-27 00:54:48] HITS file was successfully produced:
[2025-11-27 00:54:48] -rw------- 1 boinc boinc 902676018 Nov 27 00:53 shared/HITS.pool.root.1
[2025-11-27 00:54:48]  *** Contents of shared directory: ***
[2025-11-27 00:54:48] total 1285492
[2025-11-27 00:54:48] -rw-r--r-- 2 boinc boinc 408487146 Nov 26 19:18 ATLAS.root_0
[2025-11-27 00:54:48] -rw-r--r-- 2 boinc boinc     15847 Nov 26 19:18 start_atlas.sh
[2025-11-27 00:54:48] -rw-r--r-- 2 boinc boinc    590100 Nov 26 19:18 input.tar.gz
[2025-11-27 00:54:48] -rw------- 1 boinc boinc 902676018 Nov 27 00:53 HITS.pool.root.1
[2025-11-27 00:54:48] -rw------- 1 boinc boinc   4556800 Nov 27 00:54 result.tar.gz
00:54:49 (4151693): run_atlas exited; CPU time 151088.863359
00:54:49 (4151693): called boinc_finish(0)

</stderr_txt>
]]>

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