Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
01:17:29 (8700): wrapper (7.7.26015): starting
01:17:29 (8700): wrapper: running run_atlas (--nthreads 8)
[2025-11-27 01:17:30] Arguments: --nthreads 8
[2025-11-27 01:17:30] Threads: 8
[2025-11-27 01:17:30] Checking for CVMFS
[2025-11-27 01:17:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 01:17:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 01:17:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 01:17:30] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 01:17:30] 2.11.0.0 4356 66040 97776 153341 2 88 2323102 4096001 1427 130560 3 6564796 99.778 3103850 400 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-11-27 01:17:30] CVMFS is ok
[2025-11-27 01:17:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 01:17:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 01:17:30] Further information can be found at the LHC@home message board.
[2025-11-27 01:17:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 01:17:30] Checking for apptainer binary...
[2025-11-27 01:17:30] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-11-27 01:17:30] apptainer is not installed, using version from CVMFS
[2025-11-27 01:17:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 01:17:30] WARNING: Environment variable TMPDIR already has value [/tmp/job_10927857/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node172
[2025-11-27 01:17:30] apptainer works
[2025-11-27 01:17:30] Set ATHENA_PROC_NUMBER=8
[2025-11-27 01:17:30] Set ATHENA_CORE_NUMBER=8
[2025-11-27 01:17:30] Starting ATLAS job with PandaID=6895356409
[2025-11-27 01:17:30] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10927857/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:44:07]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:44:07] 2025-11-27 04:43:25,083 | INFO     | time since job start (15950s) is within the limit (172800.0s)
[2025-11-27 05:44:07] 2025-11-27 04:43:26,625 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 05:44:07] 2025-11-27 04:43:26,629 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2630.6620624999996
[2025-11-27 05:44:07] 2025-11-27 04:43:26,635 | INFO     | using path: /tmp/job_10927857/atlas/pilot/slots/0/PanDA_Pilot-6895356409/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:44:07] 2025-11-27 04:43:26,635 | INFO     | extracted standard info from prmon json
[2025-11-27 05:44:07] 2025-11-27 04:43:26,635 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:44:07] 2025-11-27 04:43:26,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:44:07] 2025-11-27 04:43:26,638 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:44:07] 2025-11-27 04:43:26,638 | INFO     | sum of square deviations: 5576683165.5
[2025-11-27 05:44:07] 2025-11-27 04:43:26,639 | INFO     | sum of deviations: 119157762004.50002
[2025-11-27 05:44:07] 2025-11-27 04:43:26,639 | INFO     | mean x: 1764210632.5
[2025-11-27 05:44:07] 2025-11-27 04:43:26,639 | INFO     | mean y: 2899543.9122137404
[2025-11-27 05:44:07] 2025-11-27 04:43:26,639 | INFO     | intersect: -37693233522.02203
[2025-11-27 05:44:07] 2025-11-27 04:43:26,639 | INFO     | chi2: 3.2022103329505294
[2025-11-27 05:44:07] 2025-11-27 04:43:26,639 | INFO     | sum of square deviations: 5263458688.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,640 | INFO     | sum of deviations: 173882898398.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,640 | INFO     | mean x: 1764210480.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,640 | INFO     | mean y: 2926007.4552529184
[2025-11-27 05:44:07] 2025-11-27 04:43:26,640 | INFO     | intersect: -58279289134.826256
[2025-11-27 05:44:07] 2025-11-27 04:43:26,640 | INFO     | chi2: 1.4725508283090247
[2025-11-27 05:44:07] 2025-11-27 04:43:26,640 | INFO     | current chi2=1.4725508283090247 (change=54.014550101329206 %)
[2025-11-27 05:44:07] 2025-11-27 04:43:26,641 | INFO     | sum of square deviations: 4962187923.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,642 | INFO     | sum of deviations: 167690408245.99982
[2025-11-27 05:44:07] 2025-11-27 04:43:26,642 | INFO     | mean x: 1764210327.5
[2025-11-27 05:44:07] 2025-11-27 04:43:26,642 | INFO     | mean y: 2922873.0634920634
[2025-11-27 05:44:07] 2025-11-27 04:43:26,642 | INFO     | intersect: -59616171494.37166
[2025-11-27 05:44:07] 2025-11-27 04:43:26,642 | INFO     | chi2: 1.469948079813556
[2025-11-27 05:44:07] 2025-11-27 04:43:26,642 | INFO     | current chi2=1.469948079813556 (change=0.17675101228645027 %)
[2025-11-27 05:44:07] 2025-11-27 04:43:26,642 | INFO     | right removable region: 251
[2025-11-27 05:44:07] 2025-11-27 04:43:26,642 | INFO     | sum of square deviations: 5263458688.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,643 | INFO     | sum of deviations: 69312861498.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,643 | INFO     | mean x: 1764210785.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,643 | INFO     | mean y: 2923630.046692607
[2025-11-27 05:44:07] 2025-11-27 04:43:26,643 | INFO     | intersect: -23229423205.461113
[2025-11-27 05:44:07] 2025-11-27 04:43:26,643 | INFO     | chi2: 1.812541069546041
[2025-11-27 05:44:07] 2025-11-27 04:43:26,643 | INFO     | current chi2=1.812541069546041 (change=43.39718878253826 %)
[2025-11-27 05:44:07] 2025-11-27 04:43:26,644 | INFO     | sum of square deviations: 4962187923.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,644 | INFO     | sum of deviations: 55887437805.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,644 | INFO     | mean x: 1764210937.5
[2025-11-27 05:44:07] 2025-11-27 04:43:26,644 | INFO     | mean y: 2930420.4285714286
[2025-11-27 05:44:07] 2025-11-27 04:43:26,645 | INFO     | intersect: -19866778380.285866
[2025-11-27 05:44:07] 2025-11-27 04:43:26,645 | INFO     | chi2: 1.7842823146270277
[2025-11-27 05:44:07] 2025-11-27 04:43:26,645 | INFO     | current chi2=1.7842823146270277 (change=1.5590683926456324 %)
[2025-11-27 05:44:07] 2025-11-27 04:43:26,645 | INFO     | left removable region: 20
[2025-11-27 05:44:07] 2025-11-27 04:43:26,645 | INFO     | sum of square deviations: 3822136780.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | sum of deviations: 83598479070.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | mean x: 1764210907.0
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | mean y: 2967500.0346320346
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | intersect: -38584178139.453766
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | chi2: 0.01962182884019192
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | current memory leak: 21.87 B/s (using 231 data points, chi2=0.02)
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | could have reported an average CPU frequency of 2997 MHz (12 samples)
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | ..............................
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | . Timing measurements:
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | . get job = 0 s
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | . initial setup = 1 s
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | . payload setup = 2 s
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | . stage-in = 0 s
[2025-11-27 05:44:07] 2025-11-27 04:43:26,646 | INFO     | . payload execution = 15925 s
[2025-11-27 05:44:07] 2025-11-27 04:43:26,647 | INFO     | . stage-out = 1 s
[2025-11-27 05:44:07] 2025-11-27 04:43:26,647 | INFO     | . log creation = 0 s
[2025-11-27 05:44:07] 2025-11-27 04:43:26,647 | INFO     | ..............................
[2025-11-27 05:44:07] 2025-11-27 04:43:27,088 | INFO     | time since job start (15952s) is within the limit (172800.0s)
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | 
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | job summary report
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | --------------------------------------------------
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | PanDA job id: 6895356409
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | task id: 47556137
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | errors: (none)
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | pilot state: finished 
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | transexitcode: 0
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | exeerrorcode: 0
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | exeerrordiag: 
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | exitcode: 0
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | exitmsg: OK
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | cpuconsumptiontime: 120688 s
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | nevents: 1000
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | neventsw: 0
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | pid: 2514
[2025-11-27 05:44:07] 2025-11-27 04:43:27,155 | INFO     | pgrp: 2514
[2025-11-27 05:44:07] 2025-11-27 04:43:27,156 | INFO     | corecount: 8
[2025-11-27 05:44:07] 2025-11-27 04:43:27,156 | INFO     | event service: False
[2025-11-27 05:44:07] 2025-11-27 04:43:27,156 | INFO     | sizes: {0: 2284390, 2: 2284652, 11: 2284680, 15931: 2316956, 15934: 2325980, 15935: 2326036, 15939: 2326410}
[2025-11-27 05:44:07] 2025-11-27 04:43:27,156 | INFO     | --------------------------------------------------
[2025-11-27 05:44:07] 2025-11-27 04:43:27,156 | INFO     | 
[2025-11-27 05:44:07] 2025-11-27 04:43:27,156 | INFO     | executing command: ls -lF /tmp/job_10927857/atlas/pilot/slots/0
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,165 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:44:07] 2025-11-27 04:43:27,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,166 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:44:07] 2025-11-27 04:43:27,166 | INFO     | job 6895356409 has completed (purged errors)
[2025-11-27 05:44:07] 2025-11-27 04:43:27,166 | INFO     | overall cleanup function is called
[2025-11-27 05:44:07] 2025-11-27 04:43:28,173 | INFO     | --- collectZombieJob: --- 10, [2514]
[2025-11-27 05:44:07] 2025-11-27 04:43:28,173 | INFO     | zombie collector waiting for pid 2514
[2025-11-27 05:44:07] 2025-11-27 04:43:28,173 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:44:07] 2025-11-27 04:43:28,173 | INFO     | collected zombie processes
[2025-11-27 05:44:07] 2025-11-27 04:43:28,173 | INFO     | will attempt to kill all subprocesses of pid=2514
[2025-11-27 05:44:07] 2025-11-27 04:43:28,284 | INFO     | process IDs to be killed: [2514] (in reverse order)
[2025-11-27 05:44:07] 2025-11-27 04:43:28,327 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:44:07] 2025-11-27 04:43:28,327 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:44:07] 2025-11-27 04:43:28,331 | INFO     | did not find any defunct processes belonging to 2514
[2025-11-27 05:44:07] 2025-11-27 04:43:28,335 | INFO     | did not find any defunct processes belonging to 2514
[2025-11-27 05:44:07] 2025-11-27 04:43:28,335 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:44:07] 2025-11-27 04:43:28,335 | INFO     | ready for new job
[2025-11-27 05:44:07] 2025-11-27 04:43:28,335 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:44:07] 2025-11-27 04:43:28,336 | INFO     | ***************************************
[2025-11-27 05:44:07] 2025-11-27 04:43:28,336 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:44:07] 2025-11-27 04:43:28,336 | INFO     | ***************************************
[2025-11-27 05:44:07] 2025-11-27 04:43:28,336 | INFO     | 
[2025-11-27 05:44:07] 2025-11-27 04:43:28,350 | INFO     | architecture information:
[2025-11-27 05:44:07] 2025-11-27 04:43:28,350 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:44:07] 2025-11-27 04:43:28,357 | INFO     | cat /etc/os-release:
[2025-11-27 05:44:07] NAME="CentOS Linux"
[2025-11-27 05:44:07] VERSION="7 (Core)"
[2025-11-27 05:44:07] ID="centos"
[2025-11-27 05:44:07] ID_LIKE="rhel fedora"
[2025-11-27 05:44:07] VERSION_ID="7"
[2025-11-27 05:44:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:44:07] ANSI_COLOR="0;31"
[2025-11-27 05:44:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:44:07] HOME_URL="https://www.centos.org/"
[2025-11-27 05:44:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:44:07] 
[2025-11-27 05:44:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:44:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:44:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:44:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:44:07] 
[2025-11-27 05:44:07] 2025-11-27 04:43:28,358 | INFO     | ***************************************
[2025-11-27 05:44:07] 2025-11-27 04:43:28,860 | INFO     | executing command: df -mP /tmp/job_10927857/atlas/pilot/slots/0
[2025-11-27 05:44:07] 2025-11-27 04:43:28,867 | INFO     | sufficient remaining disk space (215116414976 B)
[2025-11-27 05:44:07] 2025-11-27 04:43:28,867 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:44:07] 2025-11-27 04:43:28,868 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:44:07] 2025-11-27 04:43:28,868 | INFO     | update_server=False
[2025-11-27 05:44:07] 2025-11-27 04:43:28,868 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:44:07] 2025-11-27 04:43:28,868 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-27 05:44:07] 2025-11-27 04:43:28,868 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:44:07] 2025-11-27 04:43:28,868 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:44:07] 2025-11-27 04:43:28,868 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:44:07] 2025-11-27 04:43:28,868 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:44:07] 2025-11-27 04:43:29,258 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:44:07] 2025-11-27 04:43:29,281 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 05:44:07] 2025-11-27 04:43:29,281 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 05:44:07] 2025-11-27 04:43:29,281 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:44:07] 2025-11-27 04:43:29,281 | INFO     | will abort loop
[2025-11-27 05:44:07] 2025-11-27 04:43:29,379 | INFO     | all payload control threads have been joined
[2025-11-27 05:44:07] 2025-11-27 04:43:29,511 | INFO     | all job control threads have been joined
[2025-11-27 05:44:07] 2025-11-27 04:43:29,873 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:29,905 | INFO     | all data control threads have been joined
[2025-11-27 05:44:07] 2025-11-27 04:43:29,965 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:29,978 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:30,286 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:30,384 | INFO     | [payload] control thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:30,443 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:30,516 | INFO     | [job] control thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:30,731 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:30,860 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:30,910 | INFO     | [data] control thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:30,971 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:31,074 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:31,263 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:31,279 | INFO     | [job] validate thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:31,706 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:44:07] 2025-11-27 04:43:32,711 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:43:32,873 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:44:07] 2025-11-27 04:44:01,359 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:44:07] 2025-11-27 04:44:02,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2025-11-27 05:44:07] 2025-11-27 04:44:03,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:44:07] 2025-11-27 04:44:03,037 | INFO     | [monitor] control thread has ended
[2025-11-27 05:44:07] 2025-11-27 04:44:07,389 | INFO     | all workflow threads have been joined
[2025-11-27 05:44:07] 2025-11-27 04:44:07,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:44:07] 2025-11-27 04:44:07,390 | INFO     | traces error code: 0
[2025-11-27 05:44:07] 2025-11-27 04:44:07,390 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:44:07] 2025-11-27 04:44:07,443 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:44:07] 2025-11-27 04:44:07,444 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:44:07] 2025-11-27 04:44:07,446 [wrapper] pilotpid: 13564
[2025-11-27 05:44:07] 2025-11-27 04:44:07,447 [wrapper] Pilot exit status: 0
[2025-11-27 05:44:07] 2025-11-27 04:44:07,451 [wrapper] pandaids: 6895356409
[2025-11-27 05:44:07] 2025-11-27 04:44:07,475 [wrapper] cleanup supervisor_pilot 19915 13565
[2025-11-27 05:44:07] 2025-11-27 04:44:07,477 [wrapper] Test setup, not cleaning
[2025-11-27 05:44:07] 2025-11-27 04:44:07,478 [wrapper] apfmon messages muted
[2025-11-27 05:44:07] 2025-11-27 04:44:07,479 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:44:07] 2025-11-27 04:44:07,480 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:44:07]  *** Error codes and diagnostics ***
[2025-11-27 05:44:07]     "exeErrorCode": 0,
[2025-11-27 05:44:07]     "exeErrorDiag": "",
[2025-11-27 05:44:07]     "pilotErrorCode": 0,
[2025-11-27 05:44:07]     "pilotErrorDiag": "",
[2025-11-27 05:44:07]  *** Listing of results directory ***
[2025-11-27 05:44:07] total 1307648
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user    576529 Nov 23 11:16 pilot3.tar.gz
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user      5112 Nov 23 12:02 queuedata.json
[2025-11-27 05:44:07] -rwx------ 1 mf493845 unix-user     36292 Nov 23 12:02 runpilot2-wrapper.sh
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user       100 Nov 26 23:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:44:07] -rwxr-xr-x 1 mf493845 unix-user      7986 Nov 26 23:33 run_atlas
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user       105 Nov 26 23:33 job.xml
[2025-11-27 05:44:07] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 27 01:17 start_atlas.sh
[2025-11-27 05:44:07] drwxrwx--x 2 mf493845 unix-user       100 Nov 27 01:17 shared
[2025-11-27 05:44:07] -rw-r--r-- 2 mf493845 unix-user    590102 Nov 27 01:17 input.tar.gz
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user      6392 Nov 27 01:17 init_data.xml
[2025-11-27 05:44:07] -rw-r--r-- 2 mf493845 unix-user 409415327 Nov 27 01:17 EVNT.47483658._000698.pool.root.1
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user         0 Nov 27 01:17 boinc_setup_complete
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user      8192 Nov 27 01:17 boinc_mmap_file
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user         0 Nov 27 01:17 boinc_lockfile
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user      2785 Nov 27 01:17 pandaJob.out
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user    991546 Nov 27 01:17 agis_schedconf.cvmfs.json
[2025-11-27 05:44:07] drwx------ 5 mf493845 unix-user       440 Nov 27 01:17 pilot3
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user        95 Nov 27 05:42 pilot_heartbeat.json
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user 917998644 Nov 27 05:42 HITS.47556137._006939.pool.root.1
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user      1025 Nov 27 05:43 memory_monitor_summary.json
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user   1516240 Nov 27 05:43 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user   1558601 Nov 27 05:43 log.47556137._006939.job.log.tgz.1
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user      8568 Nov 27 05:43 heartbeat.json
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user      4752 Nov 27 05:44 pilotlog.txt
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user   2306241 Nov 27 05:44 log.47556137._006939.job.log.1
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user       353 Nov 27 05:44 output.list
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user       620 Nov 27 05:44 runtime_log
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user   3880960 Nov 27 05:44 result.tar.gz
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user      9221 Nov 27 05:44 runtime_log.err
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user       650 Nov 27 05:44 B7DNDm32Mh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmqoKKDm3XntDo.diag
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user     21617 Nov 27 05:44 stderr.txt
[2025-11-27 05:44:07] HITS file was successfully produced:
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user 917998644 Nov 27 05:42 shared/HITS.pool.root.1
[2025-11-27 05:44:07]  *** Contents of shared directory: ***
[2025-11-27 05:44:07] total 1300692
[2025-11-27 05:44:07] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 27 01:17 start_atlas.sh
[2025-11-27 05:44:07] -rw-r--r-- 2 mf493845 unix-user    590102 Nov 27 01:17 input.tar.gz
[2025-11-27 05:44:07] -rw-r--r-- 2 mf493845 unix-user 409415327 Nov 27 01:17 ATLAS.root_0
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user 917998644 Nov 27 05:42 HITS.pool.root.1
[2025-11-27 05:44:07] -rw------- 1 mf493845 unix-user   3880960 Nov 27 05:44 result.tar.gz
05:44:08 (8700): run_atlas exited; CPU time 120897.871044
05:44:08 (8700): called boinc_finish(0)

</stderr_txt>
]]>

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