Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:53:33 (4020203): wrapper (7.7.26015): starting
11:53:33 (4020203): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 11:53:33] Arguments: --nthreads 12
[2025-11-26 11:53:33] Threads: 12
[2025-11-26 11:53:33] Checking for CVMFS
[2025-11-26 11:53:33] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:53:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:53:33] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:53:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:53:34] 2.11.5.0 538441 28503 313224 153333 1 454 44351861 45568000 20462 130560 0 237267571 99.801 140200732 26328 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-26 11:53:34] CVMFS is ok
[2025-11-26 11:53:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:53:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:53:34] Further information can be found at the LHC@home message board.
[2025-11-26 11:53:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:53:34] Checking for apptainer binary...
[2025-11-26 11:53:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:53:34] Running /usr/bin/apptainer --version
[2025-11-26 11:53:34] apptainer version 1.4.1-1.el9
[2025-11-26 11:53:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:53:34] wns0030.triumf.lcg
[2025-11-26 11:53:34] apptainer works
[2025-11-26 11:53:34] Set ATHENA_PROC_NUMBER=12
[2025-11-26 11:53:34] Set ATHENA_CORE_NUMBER=12
[2025-11-26 11:53:34] Starting ATLAS job with PandaID=6895368134
[2025-11-26 11:53:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:57:54]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:57:54] 2025-11-26 19:57:32,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 11:57:54] 2025-11-26 19:57:32,333 | WARNING  | wrong length of table data, x=[1764186860.0, 1764186921.0], y=[24892.0, 229807.0] (must be same and length>=4)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | could have reported an average CPU frequency of 1996 MHz (4 samples)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | ..............................
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . Timing measurements:
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . get job = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . initial setup = 2 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . payload setup = 8 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . stage-in = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . payload execution = 69 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | . stage-out = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | . log creation = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | ..............................
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895368134/pilotlog.txt
[2025-11-26 11:57:54] 2025-11-26 19:57:32,351 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-26 11:57:54] - Log from pilotlog.txt -
[2025-11-26 11:57:54] 2025-11-26 19:57:32,332 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895368134/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,332 | INFO     | extracted standard info from prmon json
[2025-11-26 11:57:54] 2025-11-26 19:57:32,332 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:57:54] 2025-11-26 19:57:32,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:57:54] 2025-11-26 19:57:32,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 11:57:54] 2025-11-26 19:57:32,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 11:57:54] 2025-11-26 19:57:32,333 | WARNING  | wrong length of table data, x=[1764186860.0, 1764186921.0], y=[24892.0, 229807.0] (must be same and length>=4)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | could have reported an average CPU frequency of 1996 MHz (4 samples)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | ..............................
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . Timing measurements:
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . get job = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . initial setup = 2 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . payload setup = 8 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . stage-in = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . payload execution = 69 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | . stage-out = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | . log creation = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | ..............................
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895368134/pilotlog.txt
[2025-11-26 11:57:54] 2025-11-26 19:57:32,352 | WARNING  | 
[2025-11-26 11:57:54] [begin log extracts]
[2025-11-26 11:57:54] - Log from pilotlog.txt -
[2025-11-26 11:57:54] 2025-11-26 19:57:32,332 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6895368134/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,332 | INFO     | extracted standard info from prmon json
[2025-11-26 11:57:54] 2025-11-26 19:57:32,332 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:57:54] 2025-11-26 19:57:32,332 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:57:54] 2025-11-26 19:57:32,333 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 11:57:54] 2025-11-26 19:57:32,333 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 11:57:54] 2025-11-26 19:57:32,333 | WARNING  | wrong length of table data, x=[1764186860.0, 1764186921.0], y=[24892.0, 229807.0] (must be same and length>=4)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | could have reported an average CPU frequency of 1996 MHz (4 samples)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | ..............................
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . Timing measurements:
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . get job = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . initial setup = 2 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . payload setup = 8 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . stage-in = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,334 | INFO     | . payload execution = 69 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | . stage-out = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | . log creation = 0 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | ..............................
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 11:57:54] 2025-11-26 19:57:32,335 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6895368134/pilotlog.txt
[2025-11-26 11:57:54] [end log extracts]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,352 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,353 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-26 11:57:54] 2025-11-26 19:57:32,680 | INFO     | 
[2025-11-26 11:57:54] 2025-11-26 19:57:32,680 | INFO     | job summary report
[2025-11-26 11:57:54] 2025-11-26 19:57:32,680 | INFO     | --------------------------------------------------
[2025-11-26 11:57:54] 2025-11-26 19:57:32,680 | INFO     | PanDA job id: 6895368134
[2025-11-26 11:57:54] 2025-11-26 19:57:32,680 | INFO     | task id: 47556137
[2025-11-26 11:57:54] 2025-11-26 19:57:32,681 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-26 11:55:20,872 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-26 11:57:54] 2025-11-26 19:57:32,681 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-26 11:57:54] 2025-11-26 19:57:32,681 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:57:54] 2025-11-26 19:57:32,681 | INFO     | pilot state: failed 
[2025-11-26 11:57:54] 2025-11-26 19:57:32,681 | INFO     | transexitcode: 65
[2025-11-26 11:57:54] 2025-11-26 19:57:32,681 | INFO     | exeerrorcode: 65
[2025-11-26 11:57:54] 2025-11-26 19:57:32,681 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-26 11:57:54] 2025-11-26 19:57:32,681 | INFO     | exitcode: 65
[2025-11-26 11:57:54] 2025-11-26 19:57:32,682 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-26 11:57:54] 2025-11-26 19:57:32,682 | INFO     | cpuconsumptiontime: 58 s
[2025-11-26 11:57:54] 2025-11-26 19:57:32,682 | INFO     | nevents: 0
[2025-11-26 11:57:54] 2025-11-26 19:57:32,682 | INFO     | neventsw: 0
[2025-11-26 11:57:54] 2025-11-26 19:57:32,682 | INFO     | pid: 4030491
[2025-11-26 11:57:54] 2025-11-26 19:57:32,682 | INFO     | pgrp: 4030491
[2025-11-26 11:57:54] 2025-11-26 19:57:32,682 | INFO     | corecount: 12
[2025-11-26 11:57:54] 2025-11-26 19:57:32,682 | INFO     | event service: False
[2025-11-26 11:57:54] 2025-11-26 19:57:32,683 | INFO     | sizes: {0: 2284311, 7: 2284573, 11: 2284601, 82: 2314316, 84: 2314316, 207: 2314482}
[2025-11-26 11:57:54] 2025-11-26 19:57:32,683 | INFO     | --------------------------------------------------
[2025-11-26 11:57:54] 2025-11-26 19:57:32,683 | INFO     | 
[2025-11-26 11:57:54] 2025-11-26 19:57:32,683 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-26 11:57:54] 2025-11-26 19:57:32,691 | INFO     | time since job start (224s) is within the limit (172800.0s)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,707 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,707 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,707 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,707 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,707 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,707 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,707 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,708 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:57:54] 2025-11-26 19:57:32,709 | INFO     | job 6895368134 has completed (purged errors)
[2025-11-26 11:57:54] 2025-11-26 19:57:32,709 | INFO     | overall cleanup function is called
[2025-11-26 11:57:54] 2025-11-26 19:57:33,716 | INFO     | --- collectZombieJob: --- 10, [4030491]
[2025-11-26 11:57:54] 2025-11-26 19:57:33,717 | INFO     | zombie collector waiting for pid 4030491
[2025-11-26 11:57:54] 2025-11-26 19:57:33,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:57:54] 2025-11-26 19:57:33,717 | INFO     | collected zombie processes
[2025-11-26 11:57:54] 2025-11-26 19:57:33,717 | INFO     | will attempt to kill all subprocesses of pid=4030491
[2025-11-26 11:57:54] 2025-11-26 19:57:33,936 | INFO     | process IDs to be killed: [4030491] (in reverse order)
[2025-11-26 11:57:54] 2025-11-26 19:57:34,020 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:57:54] 2025-11-26 19:57:34,021 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:57:54] 2025-11-26 19:57:34,033 | INFO     | did not find any defunct processes belonging to 4030491
[2025-11-26 11:57:54] 2025-11-26 19:57:34,041 | INFO     | did not find any defunct processes belonging to 4030491
[2025-11-26 11:57:54] 2025-11-26 19:57:34,042 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:57:54] 2025-11-26 19:57:34,043 | INFO     | ready for new job
[2025-11-26 11:57:54] 2025-11-26 19:57:34,043 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:57:54] 2025-11-26 19:57:34,044 | INFO     | ***************************************
[2025-11-26 11:57:54] 2025-11-26 19:57:34,044 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:57:54] 2025-11-26 19:57:34,044 | INFO     | ***************************************
[2025-11-26 11:57:54] 2025-11-26 19:57:34,044 | INFO     | 
[2025-11-26 11:57:54] 2025-11-26 19:57:34,047 | INFO     | architecture information:
[2025-11-26 11:57:54] 2025-11-26 19:57:34,047 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:57:54] 2025-11-26 19:57:34,062 | INFO     | cat /etc/os-release:
[2025-11-26 11:57:54] NAME="CentOS Linux"
[2025-11-26 11:57:54] VERSION="7 (Core)"
[2025-11-26 11:57:54] ID="centos"
[2025-11-26 11:57:54] ID_LIKE="rhel fedora"
[2025-11-26 11:57:54] VERSION_ID="7"
[2025-11-26 11:57:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:57:54] ANSI_COLOR="0;31"
[2025-11-26 11:57:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:57:54] HOME_URL="https://www.centos.org/"
[2025-11-26 11:57:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:57:54] 
[2025-11-26 11:57:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:57:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:57:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:57:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:57:54] 
[2025-11-26 11:57:54] 2025-11-26 19:57:34,063 | INFO     | ***************************************
[2025-11-26 11:57:54] 2025-11-26 19:57:34,566 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-26 11:57:54] 2025-11-26 19:57:34,588 | INFO     | sufficient remaining disk space (1855052578816 B)
[2025-11-26 11:57:54] 2025-11-26 19:57:34,588 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:57:54] 2025-11-26 19:57:34,589 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:57:54] 2025-11-26 19:57:34,589 | INFO     | update_server=False
[2025-11-26 11:57:54] 2025-11-26 19:57:34,589 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:57:54] 2025-11-26 19:57:34,589 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:57:54] 2025-11-26 19:57:34,590 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 11:57:54] 2025-11-26 19:57:34,590 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:57:54] 2025-11-26 19:57:34,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:57:54] 2025-11-26 19:57:34,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:57:54] 2025-11-26 19:57:34,735 | INFO     | all payload control threads have been joined
[2025-11-26 11:57:54] 2025-11-26 19:57:34,813 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:57:54] 2025-11-26 19:57:34,814 | INFO     | aborting loop
[2025-11-26 11:57:54] 2025-11-26 19:57:35,218 | INFO     | all data control threads have been joined
[2025-11-26 11:57:54] 2025-11-26 19:57:35,595 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:35,740 | INFO     | [payload] control thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:35,742 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:35,783 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:35,819 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:36,083 | INFO     | all job control threads have been joined
[2025-11-26 11:57:54] 2025-11-26 19:57:36,116 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:36,223 | INFO     | [data] control thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:36,586 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:36,595 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:36,765 | INFO     | [job] validate thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:36,800 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:36,930 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:37,034 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:37,091 | INFO     | [job] control thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:37,262 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:57:54] 2025-11-26 19:57:37,435 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:57:54] 2025-11-26 19:57:38,440 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:41,269 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:57:54] 2025-11-26 19:57:48,289 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:57:54] 2025-11-26 19:57:49,082 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686341490496)>', '<ExcThread(monitor, started 139685800167168)>']
[2025-11-26 11:57:54] 2025-11-26 19:57:49,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:57:54] 2025-11-26 19:57:49,667 | INFO     | [monitor] control thread has ended
[2025-11-26 11:57:54] 2025-11-26 19:57:54,107 | INFO     | all workflow threads have been joined
[2025-11-26 11:57:54] 2025-11-26 19:57:54,107 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:57:54] 2025-11-26 19:57:54,108 | INFO     | traces error code: 0
[2025-11-26 11:57:54] 2025-11-26 19:57:54,108 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:57:54] 2025-11-26 19:57:54,234 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:57:54] 2025-11-26 19:57:54,238 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:57:54] 2025-11-26 19:57:54,241 [wrapper] pilotpid: 4023889
[2025-11-26 11:57:54] 2025-11-26 19:57:54,244 [wrapper] Pilot exit status: 0
[2025-11-26 11:57:54] 2025-11-26 19:57:54,256 [wrapper] pandaids: 6895368134
[2025-11-26 11:57:54] 2025-11-26 19:57:54,315 [wrapper] cleanup supervisor_pilot 4023895 4023890
[2025-11-26 11:57:54] 2025-11-26 19:57:54,320 [wrapper] Test setup, not cleaning
[2025-11-26 11:57:54] 2025-11-26 19:57:54,324 [wrapper] apfmon messages muted
[2025-11-26 11:57:54] 2025-11-26 19:57:54,328 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:57:54] 2025-11-26 19:57:54,332 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:57:54]  *** Error codes and diagnostics ***
[2025-11-26 11:57:54]     "exeErrorCode": 65,
[2025-11-26 11:57:54]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-26 11:57:54]     "pilotErrorCode": 1305,
[2025-11-26 11:57:54]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-26 11:57:54]  *** Listing of results directory ***
[2025-11-26 11:57:54] total 402212
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc    576529 Nov 23 11:15 pilot3.tar.gz
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc      5112 Nov 23 11:27 queuedata.json
[2025-11-26 11:57:54] -rwx------. 1 boinc boinc     36292 Nov 23 11:27 runpilot2-wrapper.sh
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc       100 Nov 26 11:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:57:54] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 11:53 run_atlas
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc       105 Nov 26 11:53 job.xml
[2025-11-26 11:57:54] -rw-r--r--. 2 boinc boinc 407664356 Nov 26 11:53 EVNT.47483658._000865.pool.root.1
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc      6590 Nov 26 11:53 init_data.xml
[2025-11-26 11:57:54] -rw-r--r--. 2 boinc boinc     15847 Nov 26 11:53 start_atlas.sh
[2025-11-26 11:57:54] drwxrwx--x. 2 boinc boinc      4096 Nov 26 11:53 shared
[2025-11-26 11:57:54] -rw-r--r--. 2 boinc boinc    590107 Nov 26 11:53 input.tar.gz
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc         0 Nov 26 11:53 boinc_lockfile
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc      2785 Nov 26 11:53 pandaJob.out
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc    991522 Nov 26 11:53 agis_schedconf.cvmfs.json
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc   1516240 Nov 26 11:53 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:57:54] drwx------. 5 boinc boinc      4096 Nov 26 11:53 pilot3
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc       523 Nov 26 11:54 boinc_task_state.xml
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc       995 Nov 26 11:55 memory_monitor_summary.json
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc     49068 Nov 26 11:55 log.47556137._008517.job.log.tgz.1
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc        95 Nov 26 11:56 pilot_heartbeat.json
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc     10336 Nov 26 11:57 heartbeat.json
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc        23 Nov 26 11:57 wrapper_checkpoint.txt
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc      8192 Nov 26 11:57 boinc_mmap_file
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc      4551 Nov 26 11:57 pilotlog.txt
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc     95397 Nov 26 11:57 log.47556137._008517.job.log.1
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc       186 Nov 26 11:57 output.list
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc       620 Nov 26 11:57 runtime_log
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc    163840 Nov 26 11:57 result.tar.gz
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc      8636 Nov 26 11:57 runtime_log.err
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc       645 Nov 26 11:57 ByhLDmavUh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzhIKDmBZtFFm.diag
[2025-11-26 11:57:54] -rw-r--r--. 1 boinc boinc     22398 Nov 26 11:57 stderr.txt
[2025-11-26 11:57:54] No HITS result produced
[2025-11-26 11:57:54]  *** Contents of shared directory: ***
[2025-11-26 11:57:54] total 398872
[2025-11-26 11:57:54] -rw-r--r--. 2 boinc boinc 407664356 Nov 26 11:53 ATLAS.root_0
[2025-11-26 11:57:54] -rw-r--r--. 2 boinc boinc     15847 Nov 26 11:53 start_atlas.sh
[2025-11-26 11:57:54] -rw-r--r--. 2 boinc boinc    590107 Nov 26 11:53 input.tar.gz
[2025-11-26 11:57:54] -rw-------. 1 boinc boinc    163840 Nov 26 11:57 result.tar.gz
11:57:55 (4020203): run_atlas exited; CPU time 54.382514
11:57:55 (4020203): called boinc_finish(0)

</stderr_txt>
]]>

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