Stderr output

<core_client_version>8.2.7</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-26 15:10:52 (8696): vboxwrapper version 26210
2025-11-26 15:10:52 (8696): BOINC client version: 8.2.7
2025-11-26 15:10:53 (8696): Detected: VirtualBox VboxManage Interface (Version: 7.2.0)
2025-11-26 15:10:53 (8696): Successfully copied 'init_data.xml' to the shared directory.
2025-11-26 15:10:53 (8696): Create VM. (boinc_fb5f7703b113a7e4, slot#3)
2025-11-26 15:10:54 (8696): Setting Memory Size for VM. (4300MB)
2025-11-26 15:10:54 (8696): Setting CPU Count for VM. (3)
2025-11-26 15:10:54 (8696): Setting Chipset Options for VM.
2025-11-26 15:10:55 (8696): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-26 15:10:55 (8696): Setting Boot Options for VM.
2025-11-26 15:10:55 (8696): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-26 15:10:56 (8696): Enabling VM Network Access.
2025-11-26 15:10:56 (8696): Disabling USB Support for VM.
2025-11-26 15:10:56 (8696): Disabling COM Port Support for VM.
2025-11-26 15:10:56 (8696): Disabling LPT Port Support for VM.
2025-11-26 15:10:57 (8696): Disabling Audio Support for VM.
2025-11-26 15:10:57 (8696): Disabling Clipboard Support for VM.
2025-11-26 15:10:57 (8696): Disabling Drag and Drop Support for VM.
2025-11-26 15:10:57 (8696): Adding storage controller(s) to VM.
2025-11-26 15:10:58 (8696): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-26 15:10:58 (8696): Adding VirtualBox Guest Additions to VM.
2025-11-26 15:10:58 (8696): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-26 15:10:59 (8696): forwarding host port 60823 to guest port 80
2025-11-26 15:10:59 (8696): Enabling remote desktop for VM.
2025-11-26 15:11:00 (8696): Enabling shared directory for VM.
2025-11-26 15:11:00 (8696): Starting VM using VBoxManage interface. (boinc_fb5f7703b113a7e4, slot#3)
2025-11-26 15:11:05 (8696): Successfully started VM. (PID = '12524')
2025-11-26 15:11:05 (8696): Reporting VM Process ID to BOINC.
2025-11-26 15:11:05 (8696): Guest Log: BIOS: VirtualBox 7.2.0
2025-11-26 15:11:05 (8696): Guest Log: CPUID EDX: 0x178bfbff
2025-11-26 15:11:05 (8696): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-26 15:11:05 (8696): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-26 15:11:05 (8696): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-26 15:11:05 (8696): Detected: Web Application Enabled (http://localhost:60823)
2025-11-26 15:11:05 (8696): Detected: Remote Desktop Enabled (localhost:60824)
2025-11-26 15:11:05 (8696): Preference change detected
2025-11-26 15:11:05 (8696): Setting CPU throttle for VM. (100%)
2025-11-26 15:11:05 (8696): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-26 15:11:07 (8696): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-26 15:11:07 (8696): Guest Log: BIOS: Booting from Hard Disk...
2025-11-26 15:11:09 (8696): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-26 15:11:09 (8696): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-26 15:11:09 (8696): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-26 15:11:13 (8696): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-26 15:11:13 (8696): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-26 15:11:17 (8696): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-26 15:11:17 (8696): Guest Log: 00:00:00.000113 main     Log opened 2025-11-26T15:11:14.363858000Z
2025-11-26 15:11:17 (8696): Guest Log: 00:00:00.000193 main     OS Product: Linux
2025-11-26 15:11:17 (8696): Guest Log: 00:00:00.000210 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-26 15:11:17 (8696): Guest Log: 00:00:00.000224 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-26 15:11:17 (8696): Guest Log: 00:00:00.000236 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-26 15:11:17 (8696): Guest Log: 00:00:00.000237 main     Process ID: 1289
2025-11-26 15:11:17 (8696): Guest Log: 00:00:00.000237 main     Package type: LINUX_64BITS_GENERIC
2025-11-26 15:11:17 (8696): Guest Log: 00:00:00.000691 main     5.2.32 r132073 started. Verbose level = 0
2025-11-26 15:11:17 (8696): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-26 15:11:17 (8696): Guest Log: [INFO] Mounting shared directory
2025-11-26 15:11:17 (8696): Guest Log: [INFO] Checking for init_data.xml
2025-11-26 15:11:19 (8696): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-26 15:11:19 (8696): Guest Log: [INFO] Detected branch: prod
2025-11-26 15:11:19 (8696): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-26 15:11:19 (8696): Guest Log: Copying input files
2025-11-26 15:11:20 (8696): Guest Log: Copied input files into RunAtlas.
2025-11-26 15:11:20 (8696): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-26 15:11:20 (8696): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-26 15:11:20 (8696): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-26 15:11:20 (8696): Guest Log: Further information can be found at the LHC@home message board.
2025-11-26 15:11:27 (8696): Guest Log: 00:00:10.002237 timesync vgsvcTimeSyncWorker: Radical guest time change: 18 011 999 709 000ns (GuestNow=1 764 187 886 364 827 000 ns GuestLast=1 764 169 874 365 118 000 ns fSetTimeLastLoop=true )
2025-11-26 15:11:29 (8696): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-26 15:11:29 (8696): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-26 15:11:29 (8696): Guest Log: 2.6.3.0 1566 0 32200 153333 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-26 15:11:29 (8696): Guest Log: copied the webapp to /var/www
2025-11-26 15:11:29 (8696): Guest Log: ATHENA_PROC_NUMBER=3
2025-11-26 15:11:29 (8696): Guest Log: ATHENA_CORE_NUMBER=3
2025-11-26 15:11:30 (8696): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-26 15:11:30 (8696): Guest Log:  *** Starting ATLAS job. (PandaID=6897864782 taskID=47556161) ***
2025-11-26 16:51:07 (8696): Status Report: Elapsed Time: '6000.000000'
2025-11-26 16:51:07 (8696): Status Report: CPU Time: '16873.359375'
2025-11-26 18:31:09 (8696): Status Report: Elapsed Time: '12000.000000'
2025-11-26 18:31:09 (8696): Status Report: CPU Time: '34812.000000'
2025-11-26 20:11:12 (8696): Status Report: Elapsed Time: '18000.000000'
2025-11-26 20:11:12 (8696): Status Report: CPU Time: '52750.421875'
2025-11-26 21:51:14 (8696): Status Report: Elapsed Time: '24000.000000'
2025-11-26 21:51:14 (8696): Status Report: CPU Time: '70683.156250'
2025-11-26 23:31:16 (8696): Status Report: Elapsed Time: '30000.000000'
2025-11-26 23:31:16 (8696): Status Report: CPU Time: '88624.390625'
2025-11-27 01:11:18 (8696): Status Report: Elapsed Time: '36000.000000'
2025-11-27 01:11:18 (8696): Status Report: CPU Time: '106564.625000'
2025-11-27 02:51:21 (8696): Status Report: Elapsed Time: '42000.000000'
2025-11-27 02:51:21 (8696): Status Report: CPU Time: '124503.609375'
2025-11-27 04:31:23 (8696): Status Report: Elapsed Time: '48000.000000'
2025-11-27 04:31:23 (8696): Status Report: CPU Time: '142442.234375'
2025-11-27 06:11:25 (8696): Status Report: Elapsed Time: '54000.000000'
2025-11-27 06:11:25 (8696): Status Report: CPU Time: '160380.546875'
2025-11-27 07:51:27 (8696): Status Report: Elapsed Time: '60000.000000'
2025-11-27 07:51:27 (8696): Status Report: CPU Time: '178320.953125'
2025-11-27 09:31:29 (8696): Status Report: Elapsed Time: '66000.000000'
2025-11-27 09:31:29 (8696): Status Report: CPU Time: '196261.921875'
2025-11-27 11:11:31 (8696): Status Report: Elapsed Time: '72000.000000'
2025-11-27 11:11:31 (8696): Status Report: CPU Time: '214201.375000'
2025-11-27 11:19:01 (8696): Guest Log:  *** Job finished ***
2025-11-27 11:19:01 (8696): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:05,765 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:05,765 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:33,633 | INFO     | [monitor] cgroup control has ended
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:34,389 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140536392009536)>', '<ExcThread(monitor, started 140535683606272)>']
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:35,394 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:35,395 | INFO     | [monitor] control thread has ended
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,395 | INFO     | all workflow threads have been joined
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,395 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,395 | INFO     | traces error code: 0
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,395 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,504 [wrapper] ==== pilot stdout END ====
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,507 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,510 [wrapper] pilotpid: 5936
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,513 [wrapper] Pilot exit status: 0
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,521 [wrapper] pandaids: 6897864782
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,538 [wrapper] cleanup supervisor_pilot 14349 5937
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,542 [wrapper] Test setup, not cleaning
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,545 [wrapper] apfmon messages muted
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,547 [wrapper] ==== wrapper stdout END ====
2025-11-27 11:19:01 (8696): Guest Log: 2025-11-27 16:18:39,550 [wrapper] ==== wrapper stderr END ====
2025-11-27 11:19:01 (8696): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 11:19:01 (8696): Guest Log:     "exeErrorCode": 0,
2025-11-27 11:19:01 (8696): Guest Log:     "exeErrorDiag": "",
2025-11-27 11:19:01 (8696): Guest Log:     "pilotErrorCode": 0,
2025-11-27 11:19:01 (8696): Guest Log:     "pilotErrorDiag": "",
2025-11-27 11:19:01 (8696): Guest Log:  *** Listing of results directory ***
2025-11-27 11:19:01 (8696): Guest Log: total 930412
2025-11-27 11:19:01 (8696): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 25 16:48 pilot3.tar.gz
2025-11-27 11:19:01 (8696): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 25 17:02 runpilot2-wrapper.sh
2025-11-27 11:19:01 (8696): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 25 17:02 queuedata.json
2025-11-27 11:19:01 (8696): Guest Log: -rwxr-xr-x. 1 atlas atlas     10550 Nov 26 20:11 init_data.xml
2025-11-27 11:19:01 (8696): Guest Log: -rwxr-xr-x. 1 atlas atlas    590110 Nov 26 20:11 input.tar.gz
2025-11-27 11:19:01 (8696): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 26 20:11 start_atlas.sh
2025-11-27 11:19:01 (8696): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 20:11 EVNT.47483658._002344.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 11:19:01 (8696): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 26 20:11 pandaJob.out
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas    991522 Nov 26 20:12 agis_schedconf.cvmfs.json
2025-11-27 11:19:01 (8696): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 20:12 pilot3
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas 925996665 Nov 27 16:16 HITS.47556161._003263.pool.root.1
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas      1040 Nov 27 16:17 memory_monitor_summary.json
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 16:17 agis_ddmendpoints.agis.ALL.json
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas   1707716 Nov 27 16:17 log.47556161._003263.job.log.tgz.1
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas      8672 Nov 27 16:17 heartbeat.json
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 16:18 pilot_heartbeat.json
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas      4877 Nov 27 16:18 pilotlog.txt
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas   9737682 Nov 27 16:18 log.47556161._003263.job.log.1
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 16:18 output.list
2025-11-27 11:19:01 (8696): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 16:18 runtime_log
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas  11468800 Nov 27 16:18 result.tar.gz
2025-11-27 11:19:01 (8696): Guest Log: -rw-r--r--. 1 atlas atlas      8738 Nov 27 16:18 runtime_log.err
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas       658 Nov 27 16:18 1uiLDmlbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmzjJKDmjZ64Qo.diag
2025-11-27 11:19:01 (8696): Guest Log: Looking for outputfile HITS.47556161._003263.pool.root.1
2025-11-27 11:19:01 (8696): Guest Log: HITS file was successfully produced
2025-11-27 11:19:01 (8696): Guest Log: -rw-------. 1 atlas atlas 925996665 Nov 27 16:16 /home/atlas/RunAtlas/HITS.47556161._003263.pool.root.1
2025-11-27 11:19:03 (8696): Guest Log: Successfully finished the ATLAS job!
2025-11-27 11:19:03 (8696): Guest Log: Copying the results back to the shared directory!
2025-11-27 11:19:03 (8696): Guest Log:  *** Contents of shared directory: ***
2025-11-27 11:19:03 (8696): Guest Log: total 1315456
2025-11-27 11:19:03 (8696): Guest Log: -rwxrwxrwx. 1 root root 408936318 Nov 26 20:10 ATLAS.root_0
2025-11-27 11:19:03 (8696): Guest Log: -rwxrwxrwx. 1 root root 925996665 Nov 27  2025 HITS.pool.root.1
2025-11-27 11:19:03 (8696): Guest Log: -rwxrwxrwx. 1 root root     10550 Nov 26 20:10 init_data.xml
2025-11-27 11:19:03 (8696): Guest Log: -rwxrwxrwx. 1 root root    590110 Nov 26 20:10 input.tar.gz
2025-11-27 11:19:03 (8696): Guest Log: -rwxrwxrwx. 1 root root  11468800 Nov 27  2025 result.tar.gz
2025-11-27 11:19:03 (8696): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 26 20:10 start_atlas.sh
2025-11-27 11:19:03 (8696): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 11:19:03 (8696): VM Completion File Detected.
2025-11-27 11:19:03 (8696): Powering off VM.
2025-11-27 11:19:03 (8696): Successfully stopped VM.
2025-11-27 11:19:03 (8696): Deregistering VM. (boinc_fb5f7703b113a7e4, slot#3)
2025-11-27 11:19:03 (8696): Removing network bandwidth throttle group from VM.
2025-11-27 11:19:04 (8696): Removing VM from VirtualBox.
2025-11-27 11:19:09 (8696): called boinc_finish(0)

</stderr_txt>
]]>

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