Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:44:02 (3220): wrapper (7.7.26015): starting
14:44:02 (3220): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 14:44:02] Arguments: --nthreads 12
[2025-11-26 14:44:02] Threads: 12
[2025-11-26 14:44:02] Checking for CVMFS
[2025-11-26 14:44:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 14:44:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 14:44:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 14:44:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 14:44:02] 2.11.2.0 6893 118031 90804 153333 2 82 12163084 20275201 1 130560 0 50536271 99.933 6039988 31265 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 14:44:02] CVMFS is ok
[2025-11-26 14:44:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 14:44:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 14:44:02] Further information can be found at the LHC@home message board.
[2025-11-26 14:44:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 14:44:02] Checking for apptainer binary...
[2025-11-26 14:44:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 14:44:02] Running /usr/bin/apptainer --version
[2025-11-26 14:44:02] apptainer version 1.3.2-1.el7
[2025-11-26 14:44:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 14:44:04] c-205-3.aglt2.org
[2025-11-26 14:44:04] apptainer works
[2025-11-26 14:44:04] Set ATHENA_PROC_NUMBER=12
[2025-11-26 14:44:04] Set ATHENA_CORE_NUMBER=12
[2025-11-26 14:44:04] Starting ATLAS job with PandaID=6896201956
[2025-11-26 14:44:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 21:47:06]  *** The last 200 lines of the pilot log: ***
[2025-11-26 21:47:06] 2025-11-27 02:45:59,777 | INFO     | monitor loop #1896: job 0:6896201956 is in state 'finished'
[2025-11-26 21:47:06] 2025-11-27 02:45:59,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 21:47:06] 2025-11-27 02:46:00,150 | INFO     | time since job start (25301s) is within the limit (172800.0s)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,068 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 21:47:06] 2025-11-27 02:46:02,073 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1828.9166666666667
[2025-11-26 21:47:06] 2025-11-27 02:46:02,074 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896201956/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,075 | INFO     | extracted standard info from prmon json
[2025-11-26 21:47:06] 2025-11-27 02:46:02,075 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 21:47:06] 2025-11-27 02:46:02,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 21:47:06] 2025-11-27 02:46:02,082 | INFO     | fitting pss+swap vs Time
[2025-11-26 21:47:06] 2025-11-27 02:46:02,083 | INFO     | sum of square deviations: 22162447602.481895
[2025-11-26 21:47:06] 2025-11-27 02:46:02,086 | INFO     | sum of deviations: 351526123255.71136
[2025-11-26 21:47:06] 2025-11-27 02:46:02,086 | INFO     | mean x: 1764198916.2168674
[2025-11-26 21:47:06] 2025-11-27 02:46:02,087 | INFO     | mean y: 3424401.669879518
[2025-11-26 21:47:06] 2025-11-27 02:46:02,087 | INFO     | intersect: -27979134961.502316
[2025-11-26 21:47:06] 2025-11-27 02:46:02,087 | INFO     | chi2: 6.075315417969627
[2025-11-26 21:47:06] 2025-11-27 02:46:02,088 | INFO     | sum of square deviations: 21371027654.743996
[2025-11-26 21:47:06] 2025-11-27 02:46:02,091 | INFO     | sum of deviations: 515600388168.5854
[2025-11-26 21:47:06] 2025-11-27 02:46:02,091 | INFO     | mean x: 1764198763.7195122
[2025-11-26 21:47:06] 2025-11-27 02:46:02,092 | INFO     | mean y: 3455984.926829268
[2025-11-26 21:47:06] 2025-11-27 02:46:02,092 | INFO     | intersect: -42559848975.20684
[2025-11-26 21:47:06] 2025-11-27 02:46:02,092 | INFO     | chi2: 2.8928751285888703
[2025-11-26 21:47:06] 2025-11-27 02:46:02,092 | INFO     | current chi2=2.8928751285888703 (change=52.383128618601496 %)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,093 | INFO     | sum of square deviations: 20598677832.000122
[2025-11-26 21:47:06] 2025-11-27 02:46:02,096 | INFO     | sum of deviations: 549515602160.11096
[2025-11-26 21:47:06] 2025-11-27 02:46:02,096 | INFO     | mean x: 1764198611.2222223
[2025-11-26 21:47:06] 2025-11-27 02:46:02,096 | INFO     | mean y: 3462626.054320988
[2025-11-26 21:47:06] 2025-11-27 02:46:02,097 | INFO     | intersect: -47060464004.70057
[2025-11-26 21:47:06] 2025-11-27 02:46:02,097 | INFO     | chi2: 2.494644886869994
[2025-11-26 21:47:06] 2025-11-27 02:46:02,097 | INFO     | current chi2=2.494644886869994 (change=13.765898077776036 %)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,097 | INFO     | right removable region: 404
[2025-11-26 21:47:06] 2025-11-27 02:46:02,098 | INFO     | sum of square deviations: 21370972754.74398
[2025-11-26 21:47:06] 2025-11-27 02:46:02,101 | INFO     | sum of deviations: 212518621283.6826
[2025-11-26 21:47:06] 2025-11-27 02:46:02,101 | INFO     | mean x: 1764199068.7195122
[2025-11-26 21:47:06] 2025-11-27 02:46:02,102 | INFO     | mean y: 3451106.6146341464
[2025-11-26 21:47:06] 2025-11-27 02:46:02,102 | INFO     | intersect: -17540212350.211433
[2025-11-26 21:47:06] 2025-11-27 02:46:02,102 | INFO     | chi2: 3.726567484209456
[2025-11-26 21:47:06] 2025-11-27 02:46:02,102 | INFO     | current chi2=3.726567484209456 (change=38.660510149201826 %)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,103 | INFO     | sum of square deviations: 20598592797.441986
[2025-11-26 21:47:06] 2025-11-27 02:46:02,107 | INFO     | sum of deviations: 181501887394.8494
[2025-11-26 21:47:06] 2025-11-27 02:46:02,107 | INFO     | mean x: 1764199221.219753
[2025-11-26 21:47:06] 2025-11-27 02:46:02,107 | INFO     | mean y: 3457223.2938271603
[2025-11-26 21:47:06] 2025-11-27 02:46:02,107 | INFO     | intersect: -15541560416.536066
[2025-11-26 21:47:06] 2025-11-27 02:46:02,107 | INFO     | chi2: 3.676544407971509
[2025-11-26 21:47:06] 2025-11-27 02:46:02,107 | INFO     | current chi2=3.676544407971509 (change=1.3423365187913336 %)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,108 | INFO     | left removable region: 20
[2025-11-26 21:47:06] 2025-11-27 02:46:02,108 | INFO     | sum of square deviations: 17557754078.05992
[2025-11-26 21:47:06] 2025-11-27 02:46:02,111 | INFO     | sum of deviations: 340572337478.7292
[2025-11-26 21:47:06] 2025-11-27 02:46:02,111 | INFO     | mean x: 1764199190.7161458
[2025-11-26 21:47:06] 2025-11-27 02:46:02,111 | INFO     | mean y: 3504595.9791666665
[2025-11-26 21:47:06] 2025-11-27 02:46:02,112 | INFO     | intersect: -34217127467.15489
[2025-11-26 21:47:06] 2025-11-27 02:46:02,112 | INFO     | chi2: 0.0407571362372853
[2025-11-26 21:47:06] 2025-11-27 02:46:02,112 | INFO     | current memory leak: 19.40 B/s (using 384 data points, chi2=0.04)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,113 | INFO     | could have reported an average CPU frequency of 2423 MHz (17 samples)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,113 | INFO     | ..............................
[2025-11-26 21:47:06] 2025-11-27 02:46:02,113 | INFO     | . Timing measurements:
[2025-11-26 21:47:06] 2025-11-27 02:46:02,113 | INFO     | . get job = 0 s
[2025-11-26 21:47:06] 2025-11-27 02:46:02,113 | INFO     | . initial setup = 2 s
[2025-11-26 21:47:06] 2025-11-27 02:46:02,113 | INFO     | . payload setup = 8 s
[2025-11-26 21:47:06] 2025-11-27 02:46:02,113 | INFO     | . stage-in = 0 s
[2025-11-26 21:47:06] 2025-11-27 02:46:02,113 | INFO     | . payload execution = 25263 s
[2025-11-26 21:47:06] 2025-11-27 02:46:02,113 | INFO     | . stage-out = 3 s
[2025-11-26 21:47:06] 2025-11-27 02:46:02,114 | INFO     | . log creation = 0 s
[2025-11-26 21:47:06] 2025-11-27 02:46:02,114 | INFO     | ..............................
[2025-11-26 21:47:06] 2025-11-27 02:46:02,162 | INFO     | time since job start (25303s) is within the limit (172800.0s)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,530 | INFO     | 
[2025-11-26 21:47:06] 2025-11-27 02:46:02,530 | INFO     | job summary report
[2025-11-26 21:47:06] 2025-11-27 02:46:02,530 | INFO     | --------------------------------------------------
[2025-11-26 21:47:06] 2025-11-27 02:46:02,530 | INFO     | PanDA job id: 6896201956
[2025-11-26 21:47:06] 2025-11-27 02:46:02,530 | INFO     | task id: 47556173
[2025-11-26 21:47:06] 2025-11-27 02:46:02,531 | INFO     | errors: (none)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,531 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 21:47:06] 2025-11-27 02:46:02,531 | INFO     | pilot state: finished 
[2025-11-26 21:47:06] 2025-11-27 02:46:02,531 | INFO     | transexitcode: 0
[2025-11-26 21:47:06] 2025-11-27 02:46:02,531 | INFO     | exeerrorcode: 0
[2025-11-26 21:47:06] 2025-11-27 02:46:02,531 | INFO     | exeerrordiag: 
[2025-11-26 21:47:06] 2025-11-27 02:46:02,532 | INFO     | exitcode: 0
[2025-11-26 21:47:06] 2025-11-27 02:46:02,532 | INFO     | exitmsg: OK
[2025-11-26 21:47:06] 2025-11-27 02:46:02,532 | INFO     | cpuconsumptiontime: 290096 s
[2025-11-26 21:47:06] 2025-11-27 02:46:02,532 | INFO     | nevents: 1000
[2025-11-26 21:47:06] 2025-11-27 02:46:02,532 | INFO     | neventsw: 0
[2025-11-26 21:47:06] 2025-11-27 02:46:02,532 | INFO     | pid: 13288
[2025-11-26 21:47:06] 2025-11-27 02:46:02,532 | INFO     | pgrp: 13288
[2025-11-26 21:47:06] 2025-11-27 02:46:02,533 | INFO     | corecount: 12
[2025-11-26 21:47:06] 2025-11-27 02:46:02,533 | INFO     | event service: False
[2025-11-26 21:47:06] 2025-11-27 02:46:02,533 | INFO     | sizes: {0: 2284313, 5: 2284575, 11: 2284631, 25275: 2321610, 25279: 2330604, 25281: 2330660, 25286: 2331098}
[2025-11-26 21:47:06] 2025-11-27 02:46:02,533 | INFO     | --------------------------------------------------
[2025-11-26 21:47:06] 2025-11-27 02:46:02,533 | INFO     | 
[2025-11-26 21:47:06] 2025-11-27 02:46:02,533 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 21:47:06] 2025-11-27 02:46:02,558 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,559 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,559 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,559 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,560 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,560 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,560 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,560 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,561 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,561 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,561 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,561 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,561 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,561 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,562 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,562 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,562 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 21:47:06] 2025-11-27 02:46:02,562 | INFO     | job 6896201956 has completed (purged errors)
[2025-11-26 21:47:06] 2025-11-27 02:46:02,562 | INFO     | overall cleanup function is called
[2025-11-26 21:47:06] 2025-11-27 02:46:03,578 | INFO     | --- collectZombieJob: --- 10, [13288]
[2025-11-26 21:47:06] 2025-11-27 02:46:03,578 | INFO     | zombie collector waiting for pid 13288
[2025-11-26 21:47:06] 2025-11-27 02:46:03,578 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 21:47:06] 2025-11-27 02:46:03,579 | INFO     | collected zombie processes
[2025-11-26 21:47:06] 2025-11-27 02:46:03,579 | INFO     | will attempt to kill all subprocesses of pid=13288
[2025-11-26 21:47:06] 2025-11-27 02:46:03,670 | INFO     | process IDs to be killed: [13288] (in reverse order)
[2025-11-26 21:47:06] 2025-11-27 02:46:03,721 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 21:47:06] 2025-11-27 02:46:03,722 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 21:47:06] 2025-11-27 02:46:03,725 | INFO     | did not find any defunct processes belonging to 13288
[2025-11-26 21:47:06] 2025-11-27 02:46:03,728 | INFO     | did not find any defunct processes belonging to 13288
[2025-11-26 21:47:06] 2025-11-27 02:46:03,730 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 21:47:06] 2025-11-27 02:46:03,730 | INFO     | ready for new job
[2025-11-26 21:47:06] 2025-11-27 02:46:03,730 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 21:47:06] 2025-11-27 02:46:03,733 | INFO     | ***************************************
[2025-11-26 21:47:06] 2025-11-27 02:46:03,733 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 21:47:06] 2025-11-27 02:46:03,733 | INFO     | ***************************************
[2025-11-26 21:47:06] 2025-11-27 02:46:03,733 | INFO     | 
[2025-11-26 21:47:06] 2025-11-27 02:46:03,734 | INFO     | architecture information:
[2025-11-26 21:47:06] 2025-11-27 02:46:03,735 | INFO     | executing command: cat /etc/os-release
[2025-11-26 21:47:06] 2025-11-27 02:46:03,749 | INFO     | cat /etc/os-release:
[2025-11-26 21:47:06] NAME="CentOS Linux"
[2025-11-26 21:47:06] VERSION="7 (Core)"
[2025-11-26 21:47:06] ID="centos"
[2025-11-26 21:47:06] ID_LIKE="rhel fedora"
[2025-11-26 21:47:06] VERSION_ID="7"
[2025-11-26 21:47:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 21:47:06] ANSI_COLOR="0;31"
[2025-11-26 21:47:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 21:47:06] HOME_URL="https://www.centos.org/"
[2025-11-26 21:47:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 21:47:06] 
[2025-11-26 21:47:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 21:47:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 21:47:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 21:47:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 21:47:06] 
[2025-11-26 21:47:06] 2025-11-27 02:46:03,750 | INFO     | ***************************************
[2025-11-26 21:47:06] 2025-11-27 02:46:04,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 21:47:06] 2025-11-27 02:46:04,269 | INFO     | sufficient remaining disk space (28390195200 B)
[2025-11-26 21:47:06] 2025-11-27 02:46:04,270 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 21:47:06] 2025-11-27 02:46:04,270 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 21:47:06] 2025-11-27 02:46:04,270 | INFO     | update_server=False
[2025-11-26 21:47:06] 2025-11-27 02:46:04,270 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 21:47:06] 2025-11-27 02:46:04,271 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:47:06] 2025-11-27 02:46:04,271 | INFO     | aborting loop
[2025-11-26 21:47:06] 2025-11-27 02:46:04,313 | INFO     | all data control threads have been joined
[2025-11-26 21:47:06] 2025-11-27 02:46:04,743 | INFO     | all job control threads have been joined
[2025-11-26 21:47:06] 2025-11-27 02:46:04,885 | INFO     | all payload control threads have been joined
[2025-11-26 21:47:06] 2025-11-27 02:46:05,272 | INFO     | [job] job monitor thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:05,276 | INFO     | [job] retrieve thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:05,319 | INFO     | [data] control thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:05,400 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 21:47:06] 2025-11-27 02:46:05,420 | INFO     | [job] validate thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:05,567 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:05,569 | INFO     | [data] copytool_in thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:05,608 | INFO     | [payload] failed_post thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:05,703 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:05,748 | INFO     | [job] control thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:05,845 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:05,891 | INFO     | [payload] control thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:06,257 | INFO     | [payload] validate_post thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:06,777 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:07,129 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 21:47:06] 2025-11-27 02:46:07,208 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 21:47:06] 2025-11-27 02:46:07,405 | INFO     | [data] copytool_out thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:08,213 | INFO     | [job] queue monitor thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:11,135 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 21:47:06] 2025-11-27 02:46:35,353 | INFO     | PID=6919 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-26 21:47:06] 2025-11-27 02:46:35,354 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 21:47:06] 2025-11-27 02:46:35,354 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 21:47:06] 2025-11-27 02:46:35,354 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 21:47:06] 2025-11-27 02:47:00,483 | INFO     | [monitor] cgroup control has ended
[2025-11-26 21:47:06] 2025-11-27 02:47:00,806 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140569764153152)>', '<ExcThread(monitor, started 140568977995520)>']
[2025-11-26 21:47:06] 2025-11-27 02:47:01,473 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 21:47:06] 2025-11-27 02:47:01,473 | INFO     | [monitor] control thread has ended
[2025-11-26 21:47:06] 2025-11-27 02:47:05,832 | INFO     | all workflow threads have been joined
[2025-11-26 21:47:06] 2025-11-27 02:47:05,832 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 21:47:06] 2025-11-27 02:47:05,842 | INFO     | traces error code: 0
[2025-11-26 21:47:06] 2025-11-27 02:47:05,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 21:47:06] 2025-11-27 02:47:05,931 [wrapper] ==== pilot stdout END ====
[2025-11-26 21:47:06] 2025-11-27 02:47:05,935 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 21:47:06] 2025-11-27 02:47:05,938 [wrapper] pilotpid: 6919
[2025-11-26 21:47:06] 2025-11-27 02:47:05,942 [wrapper] Pilot exit status: 0
[2025-11-26 21:47:06] 2025-11-27 02:47:05,957 [wrapper] pandaids: 6896201956
[2025-11-26 21:47:06] 2025-11-27 02:47:06,006 [wrapper] cleanup supervisor_pilot 21067 6920
[2025-11-26 21:47:06] 2025-11-27 02:47:06,010 [wrapper] Test setup, not cleaning
[2025-11-26 21:47:06] 2025-11-27 02:47:06,014 [wrapper] apfmon messages muted
[2025-11-26 21:47:06] 2025-11-27 02:47:06,017 [wrapper] ==== wrapper stdout END ====
[2025-11-26 21:47:06] 2025-11-27 02:47:06,021 [wrapper] ==== wrapper stderr END ====
[2025-11-26 21:47:06]  *** Error codes and diagnostics ***
[2025-11-26 21:47:06]     "exeErrorCode": 0,
[2025-11-26 21:47:06]     "exeErrorDiag": "",
[2025-11-26 21:47:06]     "pilotErrorCode": 0,
[2025-11-26 21:47:06]     "pilotErrorDiag": "",
[2025-11-26 21:47:06]  *** Listing of results directory ***
[2025-11-26 21:47:06] total 1296532
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas    576529 Nov 24 14:02 pilot3.tar.gz
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas      5112 Nov 24 14:27 queuedata.json
[2025-11-26 21:47:06] -rwx------ 1 boincer umatlas     36292 Nov 24 14:27 runpilot2-wrapper.sh
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas       100 Nov 26 14:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 21:47:06] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 14:43 run_atlas
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas       105 Nov 26 14:43 job.xml
[2025-11-26 21:47:06] -rw-r--r-- 2 boincer umatlas 407811585 Nov 26 14:44 EVNT.47483658._003047.pool.root.1
[2025-11-26 21:47:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 14:44 start_atlas.sh
[2025-11-26 21:47:06] drwxrwx--x 2 boincer umatlas      4096 Nov 26 14:44 shared
[2025-11-26 21:47:06] -rw-r--r-- 2 boincer umatlas    590098 Nov 26 14:44 input.tar.gz
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas         0 Nov 26 14:44 boinc_lockfile
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 14:44 pandaJob.out
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas        57 Nov 26 14:44 setup.sh.local
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas    991522 Nov 26 14:44 agis_schedconf.cvmfs.json
[2025-11-26 21:47:06] drwx------ 5 boincer umatlas      4096 Nov 26 14:44 pilot3
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas       532 Nov 26 21:37 boinc_task_state.xml
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas      5955 Nov 26 21:38 init_data.xml
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas 904485760 Nov 26 21:45 HITS.47556173._000292.pool.root.1
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas      1064 Nov 26 21:45 memory_monitor_summary.json
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas   1516240 Nov 26 21:45 agis_ddmendpoints.agis.ALL.json
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas   2182237 Nov 26 21:45 log.47556173._000292.job.log.tgz.1
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas      8664 Nov 26 21:46 heartbeat.json
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas        95 Nov 26 21:46 pilot_heartbeat.json
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas        29 Nov 26 21:46 wrapper_checkpoint.txt
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 21:46 boinc_mmap_file
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas      4745 Nov 26 21:47 pilotlog.txt
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas   3537341 Nov 26 21:47 log.47556173._000292.job.log.1
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas       353 Nov 26 21:47 output.list
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas       620 Nov 26 21:47 runtime_log
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas   5734400 Nov 26 21:47 result.tar.gz
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas      9340 Nov 26 21:47 runtime_log.err
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas       669 Nov 26 21:47 lUWMDmoOrh8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmVsLKDmaMLVlm.diag
[2025-11-26 21:47:06] -rw-r--r-- 1 boincer umatlas     21318 Nov 26 21:47 stderr.txt
[2025-11-26 21:47:06] HITS file was successfully produced:
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas 904485760 Nov 26 21:45 shared/HITS.pool.root.1
[2025-11-26 21:47:06]  *** Contents of shared directory: ***
[2025-11-26 21:47:06] total 1287744
[2025-11-26 21:47:06] -rw-r--r-- 2 boincer umatlas 407811585 Nov 26 14:44 ATLAS.root_0
[2025-11-26 21:47:06] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 14:44 start_atlas.sh
[2025-11-26 21:47:06] -rw-r--r-- 2 boincer umatlas    590098 Nov 26 14:44 input.tar.gz
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas 904485760 Nov 26 21:45 HITS.pool.root.1
[2025-11-26 21:47:06] -rw------- 1 boincer umatlas   5734400 Nov 26 21:47 result.tar.gz
21:47:07 (3220): run_atlas exited; CPU time 283495.420717
21:47:07 (3220): called boinc_finish(0)

</stderr_txt>
]]>

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