Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-26 21:06:16 (25544): vboxwrapper version 26210
2025-11-26 21:06:16 (25544): BOINC client version: 8.0.2
2025-11-26 21:06:16 (25544): Detected: VirtualBox VboxManage Interface (Version: 7.0.12)
2025-11-26 21:06:16 (25544): Successfully copied 'init_data.xml' to the shared directory.
2025-11-26 21:06:17 (25544): Create VM. (boinc_72e00a3135d0ab93, slot#0)
2025-11-26 21:06:17 (25544): Setting Memory Size for VM. (6200MB)
2025-11-26 21:06:17 (25544): Setting CPU Count for VM. (4)
2025-11-26 21:06:18 (25544): Setting Chipset Options for VM.
2025-11-26 21:06:18 (25544): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-26 21:06:18 (25544): Setting Boot Options for VM.
2025-11-26 21:06:19 (25544): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-26 21:06:19 (25544): Enabling VM Network Access.
2025-11-26 21:06:19 (25544): Disabling USB Support for VM.
2025-11-26 21:06:20 (25544): Disabling COM Port Support for VM.
2025-11-26 21:06:20 (25544): Disabling LPT Port Support for VM.
2025-11-26 21:06:20 (25544): Disabling Audio Support for VM.
2025-11-26 21:06:20 (25544): Disabling Clipboard Support for VM.
2025-11-26 21:06:21 (25544): Disabling Drag and Drop Support for VM.
2025-11-26 21:06:21 (25544): Adding storage controller(s) to VM.
2025-11-26 21:06:21 (25544): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-26 21:06:22 (25544): Adding VirtualBox Guest Additions to VM.
2025-11-26 21:06:22 (25544): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-26 21:06:22 (25544): forwarding host port 60698 to guest port 80
2025-11-26 21:06:22 (25544): Enabling remote desktop for VM.
2025-11-26 21:06:23 (25544): Enabling shared directory for VM.
2025-11-26 21:06:24 (25544): Starting VM using VBoxManage interface. (boinc_72e00a3135d0ab93, slot#0)
2025-11-26 21:06:29 (25544): Successfully started VM. (PID = '28060')
2025-11-26 21:06:29 (25544): Reporting VM Process ID to BOINC.
2025-11-26 21:06:29 (25544): Guest Log: BIOS: VirtualBox 7.0.12
2025-11-26 21:06:29 (25544): Guest Log: CPUID EDX: 0x178bfbff
2025-11-26 21:06:29 (25544): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-26 21:06:29 (25544): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-26 21:06:29 (25544): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-26 21:06:29 (25544): Detected: Web Application Enabled (http://localhost:60698)
2025-11-26 21:06:29 (25544): Detected: Remote Desktop Enabled (localhost:60699)
2025-11-26 21:06:29 (25544): Preference change detected
2025-11-26 21:06:29 (25544): Setting CPU throttle for VM. (100%)
2025-11-26 21:06:29 (25544): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-26 21:06:31 (25544): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-26 21:06:31 (25544): Guest Log: BIOS: Booting from Hard Disk...
2025-11-26 21:06:34 (25544): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-26 21:06:34 (25544): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-26 21:06:34 (25544): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-26 21:06:37 (25544): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-26 21:06:37 (25544): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-26 21:06:41 (25544): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-26 21:06:41 (25544): Guest Log: 00:00:00.000093 main     Log opened 2025-11-26T21:06:38.914987000Z
2025-11-26 21:06:41 (25544): Guest Log: 00:00:00.000154 main     OS Product: Linux
2025-11-26 21:06:41 (25544): Guest Log: 00:00:00.000180 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-26 21:06:41 (25544): Guest Log: 00:00:00.000200 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-26 21:06:41 (25544): Guest Log: 00:00:00.000218 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-26 21:06:41 (25544): Guest Log: 00:00:00.000218 main     Process ID: 1362
2025-11-26 21:06:41 (25544): Guest Log: 00:00:00.000219 main     Package type: LINUX_64BITS_GENERIC
2025-11-26 21:06:41 (25544): Guest Log: 00:00:00.000795 main     5.2.32 r132073 started. Verbose level = 0
2025-11-26 21:06:41 (25544): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-26 21:06:41 (25544): Guest Log: [INFO] Mounting shared directory
2025-11-26 21:06:41 (25544): Guest Log: [INFO] Checking for init_data.xml
2025-11-26 21:06:44 (25544): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-26 21:06:44 (25544): Guest Log: [INFO] Detected branch: prod
2025-11-26 21:06:44 (25544): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-26 21:06:44 (25544): Guest Log: Copying input files
2025-11-26 21:06:46 (25544): Guest Log: Copied input files into RunAtlas.
2025-11-26 21:06:46 (25544): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-11-26 21:06:51 (25544): Guest Log: 00:00:10.003071 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 588 482 162 000ns (GuestNow=1 764 187 610 434 388 000 ns GuestLast=1 764 191 198 916 550 000 ns fSetTimeLastLoop=true )
2025-11-26 21:06:54 (25544): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-26 21:06:54 (25544): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-26 21:06:54 (25544): Guest Log: 2.6.3.0 1637 0 29580 153333 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-11-26 21:06:54 (25544): Guest Log: copied the webapp to /var/www
2025-11-26 21:06:55 (25544): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-26 21:06:55 (25544): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-26 21:06:55 (25544): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-26 21:06:55 (25544): Guest Log:  *** Starting ATLAS job. (PandaID=6897663410 taskID=47556161) ***
2025-11-26 22:46:33 (25544): Status Report: Elapsed Time: '6000.000000'
2025-11-26 22:46:33 (25544): Status Report: CPU Time: '22745.031250'
2025-11-27 00:26:38 (25544): Status Report: Elapsed Time: '12000.000000'
2025-11-27 00:26:38 (25544): Status Report: CPU Time: '46666.328125'
2025-11-27 02:06:42 (25544): Status Report: Elapsed Time: '18000.000000'
2025-11-27 02:06:42 (25544): Status Report: CPU Time: '70598.000000'
2025-11-27 03:46:47 (25544): Status Report: Elapsed Time: '24000.000000'
2025-11-27 03:46:47 (25544): Status Report: CPU Time: '94524.562500'
2025-11-27 04:02:18 (25544): Guest Log:  *** Job finished ***
2025-11-27 04:02:18 (25544): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:01:40,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:01:40,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:08,826 | INFO     | [monitor] cgroup control has ended
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:10,787 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140364740798272)>', '<ExcThread(monitor, started 140363985561344)>']
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:11,698 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:11,698 | INFO     | [monitor] control thread has ended
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,817 | INFO     | all workflow threads have been joined
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,817 | INFO     | end of generic workflow (traces error code: 0)
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,817 | INFO     | traces error code: 0
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,860 [wrapper] ==== pilot stdout END ====
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,863 [wrapper] ==== wrapper stdout RESUME ====
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,865 [wrapper] pilotpid: 6042
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,868 [wrapper] Pilot exit status: 0
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,877 [wrapper] pandaids: 6897663410
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,899 [wrapper] cleanup supervisor_pilot   315 6043
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,907 [wrapper] Test setup, not cleaning
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,910 [wrapper] apfmon messages muted
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,914 [wrapper] ==== wrapper stdout END ====
2025-11-27 04:02:18 (25544): Guest Log: 2025-11-27 03:02:15,916 [wrapper] ==== wrapper stderr END ====
2025-11-27 04:02:18 (25544): Guest Log:  *** Error codes and diagnostics ***
2025-11-27 04:02:18 (25544): Guest Log:     "exeErrorCode": 0,
2025-11-27 04:02:18 (25544): Guest Log:     "exeErrorDiag": "",
2025-11-27 04:02:18 (25544): Guest Log:     "pilotErrorCode": 0,
2025-11-27 04:02:18 (25544): Guest Log:     "pilotErrorDiag": "",
2025-11-27 04:02:18 (25544): Guest Log:  *** Listing of results directory ***
2025-11-27 04:02:18 (25544): Guest Log: total 918980
2025-11-27 04:02:18 (25544): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 25 16:48 pilot3.tar.gz
2025-11-27 04:02:18 (25544): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 25 17:01 runpilot2-wrapper.sh
2025-11-27 04:02:18 (25544): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 25 17:02 queuedata.json
2025-11-27 04:02:18 (25544): Guest Log: -rwxr-xr-x. 1 atlas atlas      9331 Nov 26 20:06 init_data.xml
2025-11-27 04:02:18 (25544): Guest Log: -rwxr-xr-x. 1 atlas atlas    590108 Nov 26 20:06 input.tar.gz
2025-11-27 04:02:18 (25544): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 26 20:06 start_atlas.sh
2025-11-27 04:02:18 (25544): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 20:06 EVNT.47483658._002318.pool.root.1 -> /data/./ATLAS.root_0
2025-11-27 04:02:18 (25544): Guest Log: -rw-r--r--. 1 atlas atlas      2786 Nov 26 20:06 pandaJob.out
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas        49 Nov 26 20:07 setup.sh.local
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas    991522 Nov 26 20:07 agis_schedconf.cvmfs.json
2025-11-27 04:02:18 (25544): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 20:07 pilot3
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas 928090760 Nov 27 03:00 HITS.47556161._003020.pool.root.1
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas        95 Nov 27 03:00 pilot_heartbeat.json
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas      1042 Nov 27 03:00 memory_monitor_summary.json
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 27 03:00 agis_ddmendpoints.agis.ALL.json
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas   1249108 Nov 27 03:00 log.47556161._003020.job.log.tgz.1
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas      8658 Nov 27 03:01 heartbeat.json
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas      4877 Nov 27 03:02 pilotlog.txt
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas   3298078 Nov 27 03:02 log.47556161._003020.job.log.1
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas       353 Nov 27 03:02 output.list
2025-11-27 04:02:18 (25544): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 27 03:02 runtime_log
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas   4567040 Nov 27 03:02 result.tar.gz
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas       652 Nov 27 03:02 X7kLDmXbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmUiJKDmdVneDo.diag
2025-11-27 04:02:18 (25544): Guest Log: -rw-r--r--. 1 atlas atlas      9210 Nov 27 03:02 runtime_log.err
2025-11-27 04:02:18 (25544): Guest Log: Looking for outputfile HITS.47556161._003020.pool.root.1
2025-11-27 04:02:18 (25544): Guest Log: HITS file was successfully produced
2025-11-27 04:02:18 (25544): Guest Log: -rw-------. 1 atlas atlas 928090760 Nov 27 03:00 /home/atlas/RunAtlas/HITS.47556161._003020.pool.root.1
2025-11-27 04:02:20 (25544): Guest Log: Successfully finished the ATLAS job!
2025-11-27 04:02:20 (25544): Guest Log: Copying the results back to the shared directory!
2025-11-27 04:02:20 (25544): Guest Log:  *** Contents of shared directory: ***
2025-11-27 04:02:20 (25544): Guest Log: total 1314087
2025-11-27 04:02:20 (25544): Guest Log: -rwxrwxrwx. 1 root root 412349293 Nov 26 20:06 ATLAS.root_0
2025-11-27 04:02:20 (25544): Guest Log: -rwxrwxrwx. 1 root root 928090760 Nov 27 03:02 HITS.pool.root.1
2025-11-27 04:02:20 (25544): Guest Log: -rwxrwxrwx. 1 root root      9331 Nov 26 20:06 init_data.xml
2025-11-27 04:02:20 (25544): Guest Log: -rwxrwxrwx. 1 root root    590108 Nov 26 20:05 input.tar.gz
2025-11-27 04:02:20 (25544): Guest Log: -rwxrwxrwx. 1 root root   4567040 Nov 27 03:02 result.tar.gz
2025-11-27 04:02:20 (25544): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 26 20:05 start_atlas.sh
2025-11-27 04:02:20 (25544): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-27 04:02:20 (25544): VM Completion File Detected.
2025-11-27 04:02:20 (25544): Powering off VM.
2025-11-27 04:02:21 (25544): Successfully stopped VM.
2025-11-27 04:02:21 (25544): Deregistering VM. (boinc_72e00a3135d0ab93, slot#0)
2025-11-27 04:02:21 (25544): Removing network bandwidth throttle group from VM.
2025-11-27 04:02:21 (25544): Removing VM from VirtualBox.
2025-11-27 04:02:26 (25544): called boinc_finish(0)

</stderr_txt>
]]>

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