Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:25:30 (3164737): wrapper (7.7.26015): starting
14:25:30 (3164737): wrapper: running run_atlas (--nthreads 10)
[2025-11-26 14:25:30] Arguments: --nthreads 10
[2025-11-26 14:25:30] Threads: 10
[2025-11-26 14:25:30] Checking for CVMFS
[2025-11-26 14:25:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 14:25:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 14:25:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 14:25:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 14:25:31] 2.13.3.0 10299 30466 395924 153333 0 428 26617935 32935936 54965 16776704 0 299075119 99.813 138295813 28718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 14:25:31] CVMFS is ok
[2025-11-26 14:25:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 14:25:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 14:25:31] Further information can be found at the LHC@home message board.
[2025-11-26 14:25:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 14:25:31] Checking for apptainer binary...
[2025-11-26 14:25:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 14:25:31] Running /usr/bin/apptainer --version
[2025-11-26 14:25:31] apptainer version 1.4.4-1.el9
[2025-11-26 14:25:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 14:25:31] c-3-40.aglt2.org
[2025-11-26 14:25:31] apptainer works
[2025-11-26 14:25:32] Set ATHENA_PROC_NUMBER=10
[2025-11-26 14:25:32] Set ATHENA_CORE_NUMBER=10
[2025-11-26 14:25:32] Starting ATLAS job with PandaID=6891565271
[2025-11-26 14:25:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:30:31]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:30:31] 2025-11-27 07:29:10,099 | INFO     | time since job start (43388s) is within the limit (172800.0s)
[2025-11-27 02:30:31] 2025-11-27 07:29:11,113 | INFO     | monitor loop #2227: job 0:6891565271 is in state 'finished'
[2025-11-27 02:30:31] 2025-11-27 07:29:11,113 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:30:31] 2025-11-27 07:29:12,111 | INFO     | time since job start (43390s) is within the limit (172800.0s)
[2025-11-27 02:30:31] 2025-11-27 07:29:13,827 | INFO     | monitor loop #2228: job 0:6891565271 is in state 'finished'
[2025-11-27 02:30:31] 2025-11-27 07:29:13,827 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:30:31] 2025-11-27 07:29:16,011 | INFO     | PID=3169239 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:30:31] 2025-11-27 07:29:16,013 | INFO     | .. there are 82 such processes running
[2025-11-27 02:30:31] 2025-11-27 07:29:16,355 | INFO     | monitor loop #2229: job 0:6891565271 is in state 'finished'
[2025-11-27 02:30:31] 2025-11-27 07:29:16,355 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:30:31] 2025-11-27 07:29:17,015 | INFO     | time since job start (43395s) is within the limit (172800.0s)
[2025-11-27 02:30:31] 2025-11-27 07:29:18,872 | INFO     | monitor loop #2230: job 0:6891565271 is in state 'finished'
[2025-11-27 02:30:31] 2025-11-27 07:29:18,872 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:30:31] 2025-11-27 07:29:19,035 | INFO     | time since job start (43397s) is within the limit (172800.0s)
[2025-11-27 02:30:31] 2025-11-27 07:29:21,050 | INFO     | time since job start (43399s) is within the limit (172800.0s)
[2025-11-27 02:30:31] 2025-11-27 07:29:21,380 | INFO     | monitor loop #2231: job 0:6891565271 is in state 'finished'
[2025-11-27 02:30:31] 2025-11-27 07:29:21,380 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 02:30:31] 2025-11-27 07:29:21,437 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 02:30:31] 2025-11-27 07:29:21,519 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2963.499537500001
[2025-11-27 02:30:31] 2025-11-27 07:29:21,544 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6891565271/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:30:31] 2025-11-27 07:29:21,549 | INFO     | extracted standard info from prmon json
[2025-11-27 02:30:31] 2025-11-27 07:29:21,549 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:30:31] 2025-11-27 07:29:21,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:30:31] 2025-11-27 07:29:21,578 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:30:31] 2025-11-27 07:29:21,579 | INFO     | sum of square deviations: 110988231315.79712
[2025-11-27 02:30:31] 2025-11-27 07:29:21,594 | INFO     | sum of deviations: 281483283097.8095
[2025-11-27 02:30:31] 2025-11-27 07:29:21,594 | INFO     | mean x: 1764206855.0169015
[2025-11-27 02:30:31] 2025-11-27 07:29:21,594 | INFO     | mean y: 3154822.9323943662
[2025-11-27 02:30:31] 2025-11-27 07:29:21,594 | INFO     | intersect: -4471146026.144545
[2025-11-27 02:30:31] 2025-11-27 07:29:21,595 | INFO     | chi2: 16.245024843860538
[2025-11-27 02:30:31] 2025-11-27 07:29:21,600 | INFO     | sum of square deviations: 108660339391.71045
[2025-11-27 02:30:31] 2025-11-27 07:29:21,620 | INFO     | sum of deviations: 556308995572.584
[2025-11-27 02:30:31] 2025-11-27 07:29:21,620 | INFO     | mean x: 1764206702.5276597
[2025-11-27 02:30:31] 2025-11-27 07:29:21,620 | INFO     | mean y: 3172817.6624113475
[2025-11-27 02:30:31] 2025-11-27 07:29:21,620 | INFO     | intersect: -9029046887.887817
[2025-11-27 02:30:31] 2025-11-27 07:29:21,621 | INFO     | chi2: 12.508842407204014
[2025-11-27 02:30:31] 2025-11-27 07:29:21,621 | INFO     | current chi2=12.508842407204014 (change=22.99893335077622 %)
[2025-11-27 02:30:31] 2025-11-27 07:29:21,621 | INFO     | right removable region: 704
[2025-11-27 02:30:31] 2025-11-27 07:29:21,626 | INFO     | sum of square deviations: 108659682421.71054
[2025-11-27 02:30:31] 2025-11-27 07:29:21,644 | INFO     | sum of deviations: 4639412972.549957
[2025-11-27 02:30:31] 2025-11-27 07:29:21,644 | INFO     | mean x: 1764207007.5276597
[2025-11-27 02:30:31] 2025-11-27 07:29:21,645 | INFO     | mean y: 3172943.920567376
[2025-11-27 02:30:31] 2025-11-27 07:29:21,645 | INFO     | intersect: -72152923.91348031
[2025-11-27 02:30:31] 2025-11-27 07:29:21,645 | INFO     | chi2: 13.04359716759233
[2025-11-27 02:30:31] 2025-11-27 07:29:21,650 | INFO     | current chi2=13.04359716759233 (change=19.707126994503305 %)
[2025-11-27 02:30:31] 2025-11-27 07:29:21,650 | INFO     | left removable region: 10
[2025-11-27 02:30:31] 2025-11-27 07:29:21,651 | INFO     | sum of square deviations: 103652974395.61548
[2025-11-27 02:30:31] 2025-11-27 07:29:21,670 | INFO     | sum of deviations: 263177858646.3381
[2025-11-27 02:30:31] 2025-11-27 07:29:21,670 | INFO     | mean x: 1764206977.0446687
[2025-11-27 02:30:31] 2025-11-27 07:29:21,670 | INFO     | mean y: 3199279.1181556196
[2025-11-27 02:30:31] 2025-11-27 07:29:21,670 | INFO     | intersect: -4476172558.832547
[2025-11-27 02:30:31] 2025-11-27 07:29:21,671 | INFO     | chi2: 8.465668245465011
[2025-11-27 02:30:31] 2025-11-27 07:29:21,671 | INFO     | current memory leak: 2.54 B/s (using 694 data points, chi2=8.47)
[2025-11-27 02:30:31] 2025-11-27 07:29:21,673 | INFO     | could have reported an average CPU frequency of 2969 MHz (27 samples)
[2025-11-27 02:30:31] 2025-11-27 07:29:21,673 | INFO     | ..............................
[2025-11-27 02:30:31] 2025-11-27 07:29:21,674 | INFO     | . Timing measurements:
[2025-11-27 02:30:31] 2025-11-27 07:29:21,674 | INFO     | . get job = 0 s
[2025-11-27 02:30:31] 2025-11-27 07:29:21,674 | INFO     | . initial setup = 2 s
[2025-11-27 02:30:31] 2025-11-27 07:29:21,674 | INFO     | . payload setup = 17 s
[2025-11-27 02:30:31] 2025-11-27 07:29:21,674 | INFO     | . stage-in = 0 s
[2025-11-27 02:30:31] 2025-11-27 07:29:21,674 | INFO     | . payload execution = 43291 s
[2025-11-27 02:30:31] 2025-11-27 07:29:21,674 | INFO     | . stage-out = 15 s
[2025-11-27 02:30:31] 2025-11-27 07:29:21,674 | INFO     | . log creation = 2 s
[2025-11-27 02:30:31] 2025-11-27 07:29:21,674 | INFO     | ..............................
[2025-11-27 02:30:31] 2025-11-27 07:29:22,265 | INFO     | 
[2025-11-27 02:30:31] 2025-11-27 07:29:22,265 | INFO     | job summary report
[2025-11-27 02:30:31] 2025-11-27 07:29:22,265 | INFO     | --------------------------------------------------
[2025-11-27 02:30:31] 2025-11-27 07:29:22,265 | INFO     | PanDA job id: 6891565271
[2025-11-27 02:30:31] 2025-11-27 07:29:22,265 | INFO     | task id: 47493068
[2025-11-27 02:30:31] 2025-11-27 07:29:22,265 | INFO     | errors: (none)
[2025-11-27 02:30:31] 2025-11-27 07:29:22,265 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:30:31] 2025-11-27 07:29:22,265 | INFO     | pilot state: finished 
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | transexitcode: 0
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | exeerrorcode: 0
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | exeerrordiag: 
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | exitcode: 0
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | exitmsg: OK
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | cpuconsumptiontime: 250026 s
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | nevents: 1000
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | neventsw: 0
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | pid: 3176700
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | pgrp: 3176700
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | corecount: 10
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | event service: False
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | sizes: {0: 2284133, 1: 2284332, 11: 2284332, 14: 2284622, 22: 2284650, 43313: 2328753, 43314: 2328880, 43331: 2337986, 43364: 2338176}
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | --------------------------------------------------
[2025-11-27 02:30:31] 2025-11-27 07:29:22,266 | INFO     | 
[2025-11-27 02:30:31] 2025-11-27 07:29:22,267 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 02:30:31] 2025-11-27 07:29:22,368 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,369 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,370 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,370 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,370 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,370 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:30:31] 2025-11-27 07:29:22,370 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,370 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:30:31] 2025-11-27 07:29:22,370 | INFO     | job 6891565271 has completed (purged errors)
[2025-11-27 02:30:31] 2025-11-27 07:29:22,370 | INFO     | overall cleanup function is called
[2025-11-27 02:30:31] 2025-11-27 07:29:23,401 | INFO     | --- collectZombieJob: --- 10, [3176700]
[2025-11-27 02:30:31] 2025-11-27 07:29:23,401 | INFO     | zombie collector waiting for pid 3176700
[2025-11-27 02:30:31] 2025-11-27 07:29:23,401 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:30:31] 2025-11-27 07:29:23,401 | INFO     | collected zombie processes
[2025-11-27 02:30:31] 2025-11-27 07:29:23,401 | INFO     | will attempt to kill all subprocesses of pid=3176700
[2025-11-27 02:30:31] 2025-11-27 07:29:25,413 | INFO     | process IDs to be killed: [3176700] (in reverse order)
[2025-11-27 02:30:31] 2025-11-27 07:29:26,086 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:30:31] 2025-11-27 07:29:26,086 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:30:31] 2025-11-27 07:29:26,214 | INFO     | did not find any defunct processes belonging to 3176700
[2025-11-27 02:30:31] 2025-11-27 07:29:26,304 | INFO     | did not find any defunct processes belonging to 3176700
[2025-11-27 02:30:31] 2025-11-27 07:29:26,310 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:30:31] 2025-11-27 07:29:26,310 | INFO     | ready for new job
[2025-11-27 02:30:31] 2025-11-27 07:29:26,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:30:31] 2025-11-27 07:29:26,318 | INFO     | ***************************************
[2025-11-27 02:30:31] 2025-11-27 07:29:26,318 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:30:31] 2025-11-27 07:29:26,318 | INFO     | ***************************************
[2025-11-27 02:30:31] 2025-11-27 07:29:26,318 | INFO     | 
[2025-11-27 02:30:31] 2025-11-27 07:29:26,334 | INFO     | architecture information:
[2025-11-27 02:30:31] 2025-11-27 07:29:26,347 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:30:31] 2025-11-27 07:29:26,470 | INFO     | cat /etc/os-release:
[2025-11-27 02:30:31] NAME="CentOS Linux"
[2025-11-27 02:30:31] VERSION="7 (Core)"
[2025-11-27 02:30:31] ID="centos"
[2025-11-27 02:30:31] ID_LIKE="rhel fedora"
[2025-11-27 02:30:31] VERSION_ID="7"
[2025-11-27 02:30:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:30:31] ANSI_COLOR="0;31"
[2025-11-27 02:30:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:30:31] HOME_URL="https://www.centos.org/"
[2025-11-27 02:30:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:30:31] 
[2025-11-27 02:30:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:30:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:30:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:30:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:30:31] 
[2025-11-27 02:30:31] 2025-11-27 07:29:26,470 | INFO     | ***************************************
[2025-11-27 02:30:31] 2025-11-27 07:29:26,984 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 02:30:31] 2025-11-27 07:29:27,115 | INFO     | sufficient remaining disk space (65970110464 B)
[2025-11-27 02:30:31] 2025-11-27 07:29:27,115 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:30:31] 2025-11-27 07:29:27,116 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:30:31] 2025-11-27 07:29:27,116 | INFO     | update_server=False
[2025-11-27 02:30:31] 2025-11-27 07:29:27,116 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:30:31] 2025-11-27 07:29:27,116 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:30:31] 2025-11-27 07:29:27,116 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:30:31] 2025-11-27 07:29:27,117 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:30:31] 2025-11-27 07:29:27,265 | INFO     | all job control threads have been joined
[2025-11-27 02:30:31] 2025-11-27 07:29:27,447 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:30:31] 2025-11-27 07:29:27,447 | INFO     | aborting loop
[2025-11-27 02:30:31] 2025-11-27 07:29:27,768 | INFO     | all payload control threads have been joined
[2025-11-27 02:30:31] 2025-11-27 07:29:28,122 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:28,122 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:28,235 | INFO     | all data control threads have been joined
[2025-11-27 02:30:31] 2025-11-27 07:29:28,283 | INFO     | [job] control thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:28,453 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:28,774 | INFO     | [payload] control thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:28,910 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:28,910 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:28,934 | INFO     | [job] validate thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:28,938 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:29,123 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:29,248 | INFO     | [data] control thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:29,281 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:29,348 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:29,573 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:29,573 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:31,133 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:30:31] 2025-11-27 07:29:58,976 | INFO     | PID=3169239 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:30:31] 2025-11-27 07:29:58,976 | INFO     | .. there are 82 such processes running
[2025-11-27 02:30:31] 2025-11-27 07:29:59,028 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:30:31] 2025-11-27 07:29:59,028 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:30:31] 2025-11-27 07:29:59,028 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:30:31] 2025-11-27 07:30:23,903 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:30:31] 2025-11-27 07:30:24,556 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139857904224064)>', '<ExcThread(monitor, started 139857414317824)>']
[2025-11-27 02:30:31] 2025-11-27 07:30:25,269 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:30:31] 2025-11-27 07:30:25,269 | INFO     | [monitor] control thread has ended
[2025-11-27 02:30:31] 2025-11-27 07:30:29,582 | INFO     | all workflow threads have been joined
[2025-11-27 02:30:31] 2025-11-27 07:30:29,582 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:30:31] 2025-11-27 07:30:29,582 | INFO     | traces error code: 0
[2025-11-27 02:30:31] 2025-11-27 07:30:29,582 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:30:31] 2025-11-27 07:30:29,951 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:30:31] 2025-11-27 07:30:30,001 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:30:31] 2025-11-27 07:30:30,041 [wrapper] pilotpid: 3169239
[2025-11-27 02:30:31] 2025-11-27 07:30:30,162 [wrapper] Pilot exit status: 0
[2025-11-27 02:30:31] 2025-11-27 07:30:30,249 [wrapper] pandaids: 6891565271
[2025-11-27 02:30:31] 2025-11-27 07:30:30,435 [wrapper] cleanup supervisor_pilot 3627358 3169240
[2025-11-27 02:30:31] 2025-11-27 07:30:30,455 [wrapper] Test setup, not cleaning
[2025-11-27 02:30:31] 2025-11-27 07:30:30,475 [wrapper] apfmon messages muted
[2025-11-27 02:30:31] 2025-11-27 07:30:30,538 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:30:31] 2025-11-27 07:30:30,584 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:30:31]  *** Error codes and diagnostics ***
[2025-11-27 02:30:31]     "exeErrorCode": 0,
[2025-11-27 02:30:31]     "exeErrorDiag": "",
[2025-11-27 02:30:31]     "pilotErrorCode": 0,
[2025-11-27 02:30:31]     "pilotErrorDiag": "",
[2025-11-27 02:30:31]  *** Listing of results directory ***
[2025-11-27 02:30:31] total 1313528
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 10:15 pilot3.tar.gz
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 10:29 queuedata.json
[2025-11-27 02:30:31] -rwx------. 1 boincer umatlas     36292 Nov 18 10:30 runpilot2-wrapper.sh
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas       100 Nov 26 14:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:30:31] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 14:25 run_atlas
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas       105 Nov 26 14:25 job.xml
[2025-11-27 02:30:31] -rw-r--r--. 2 boincer umatlas 409373983 Nov 26 14:25 EVNT.47493065._000142.pool.root.1
[2025-11-27 02:30:31] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 14:25 start_atlas.sh
[2025-11-27 02:30:31] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 14:25 shared
[2025-11-27 02:30:31] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 14:25 input.tar.gz
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas         0 Nov 26 14:25 boinc_lockfile
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 14:25 pandaJob.out
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas    991522 Nov 26 14:26 agis_schedconf.cvmfs.json
[2025-11-27 02:30:31] drwx------. 5 boincer umatlas      4096 Nov 26 14:26 pilot3
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas       533 Nov 27 02:05 boinc_task_state.xml
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas 917561538 Nov 27 02:25 HITS.47493068._001417.pool.root.1
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas      1071 Nov 27 02:28 memory_monitor_summary.json
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas      6843 Nov 27 02:28 init_data.xml
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:28 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas   2102548 Nov 27 02:28 log.47493068._001417.job.log.tgz.1
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas      8630 Nov 27 02:29 heartbeat.json
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas        95 Nov 27 02:29 pilot_heartbeat.json
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:30 boinc_mmap_file
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:30 wrapper_checkpoint.txt
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas      4824 Nov 27 02:30 pilotlog.txt
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas   4995088 Nov 27 02:30 log.47493068._001417.job.log.1
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas       353 Nov 27 02:30 output.list
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:30 runtime_log
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas   7116800 Nov 27 02:30 result.tar.gz
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas       658 Nov 27 02:30 xRtNDmdqcf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwTFKDmxrhzTn.diag
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas      8696 Nov 27 02:30 runtime_log.err
[2025-11-27 02:30:31] -rw-r--r--. 1 boincer umatlas     21871 Nov 27 02:30 stderr.txt
[2025-11-27 02:30:31] HITS file was successfully produced:
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas 917561538 Nov 27 02:25 shared/HITS.pool.root.1
[2025-11-27 02:30:31]  *** Contents of shared directory: ***
[2025-11-27 02:30:31] total 1303396
[2025-11-27 02:30:31] -rw-r--r--. 2 boincer umatlas 409373983 Nov 26 14:25 ATLAS.root_0
[2025-11-27 02:30:31] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 14:25 start_atlas.sh
[2025-11-27 02:30:31] -rw-r--r--. 2 boincer umatlas    590099 Nov 26 14:25 input.tar.gz
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas 917561538 Nov 27 02:25 HITS.pool.root.1
[2025-11-27 02:30:31] -rw-------. 1 boincer umatlas   7116800 Nov 27 02:30 result.tar.gz
02:30:33 (3164737): run_atlas exited; CPU time 251380.680887
02:30:33 (3164737): called boinc_finish(0)

</stderr_txt>
]]>

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