Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:31:29 (1473801): wrapper (7.7.26015): starting
11:31:29 (1473801): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 11:31:29] Arguments: --nthreads 12
[2025-11-26 11:31:29] Threads: 12
[2025-11-26 11:31:29] Checking for CVMFS
[2025-11-26 11:31:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 11:31:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 11:31:31] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 11:31:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 11:31:32] 2.11.5.0 3877898 28709 215596 153333 0 186 33368724 45568000 32360 130560 0 265480342 99.798 164084828 26487 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-26 11:31:32] CVMFS is ok
[2025-11-26 11:31:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:31:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:31:32] Further information can be found at the LHC@home message board.
[2025-11-26 11:31:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:31:32] Checking for apptainer binary...
[2025-11-26 11:31:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 11:31:32] Running /usr/bin/apptainer --version
[2025-11-26 11:31:32] apptainer version 1.4.1-1.el9
[2025-11-26 11:31:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:31:33] wns0033.triumf.lcg
[2025-11-26 11:31:33] apptainer works
[2025-11-26 11:31:33] Set ATHENA_PROC_NUMBER=12
[2025-11-26 11:31:33] Set ATHENA_CORE_NUMBER=12
[2025-11-26 11:31:33] Starting ATLAS job with PandaID=6898214544
[2025-11-26 11:31:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:37:16]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:37:16] 2025-11-26 19:36:40,148 | INFO     | could have reported an average CPU frequency of 2698 MHz (4 samples)
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | ..............................
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . Timing measurements:
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . get job = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . initial setup = 3 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . payload setup = 15 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . stage-in = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . payload execution = 88 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . stage-out = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . log creation = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | ..............................
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898214544/pilotlog.txt
[2025-11-26 11:37:16] 2025-11-26 19:36:40,162 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-26 11:37:16] - Log from pilotlog.txt -
[2025-11-26 11:37:16] 2025-11-26 19:36:40,146 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898214544/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:37:16] 2025-11-26 19:36:40,146 | INFO     | extracted standard info from prmon json
[2025-11-26 11:37:16] 2025-11-26 19:36:40,146 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:37:16] 2025-11-26 19:36:40,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:37:16] 2025-11-26 19:36:40,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 11:37:16] 2025-11-26 19:36:40,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 11:37:16] 2025-11-26 19:36:40,147 | WARNING  | wrong length of table data, x=[1764185587.0, 1764185648.0], y=[1457.0, 497442.0] (must be same and length>=4)
[2025-11-26 11:37:16] 2025-11-26 19:36:40,148 | INFO     | could have reported an average CPU frequency of 2698 MHz (4 samples)
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | ..............................
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . Timing measurements:
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . get job = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . initial setup = 3 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . payload setup = 15 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . stage-in = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . payload execution = 88 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . stage-out = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . log creation = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | ..............................
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898214544/pilotlog.txt
[2025-11-26 11:37:16] 2025-11-26 19:36:40,162 | WARNING  | 
[2025-11-26 11:37:16] [begin log extracts]
[2025-11-26 11:37:16] - Log from pilotlog.txt -
[2025-11-26 11:37:16] 2025-11-26 19:36:40,146 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6898214544/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:37:16] 2025-11-26 19:36:40,146 | INFO     | extracted standard info from prmon json
[2025-11-26 11:37:16] 2025-11-26 19:36:40,146 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:37:16] 2025-11-26 19:36:40,146 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:37:16] 2025-11-26 19:36:40,147 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 11:37:16] 2025-11-26 19:36:40,147 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 11:37:16] 2025-11-26 19:36:40,147 | WARNING  | wrong length of table data, x=[1764185587.0, 1764185648.0], y=[1457.0, 497442.0] (must be same and length>=4)
[2025-11-26 11:37:16] 2025-11-26 19:36:40,148 | INFO     | could have reported an average CPU frequency of 2698 MHz (4 samples)
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | ..............................
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . Timing measurements:
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . get job = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . initial setup = 3 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . payload setup = 15 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . stage-in = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . payload execution = 88 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . stage-out = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | . log creation = 0 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | ..............................
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 11:37:16] 2025-11-26 19:36:40,149 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6898214544/pilotlog.txt
[2025-11-26 11:37:16] [end log extracts]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,163 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-26 11:37:16] 2025-11-26 19:36:40,163 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-26 11:37:16] 2025-11-26 19:36:40,580 | INFO     | 
[2025-11-26 11:37:16] 2025-11-26 19:36:40,580 | INFO     | job summary report
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | --------------------------------------------------
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | PanDA job id: 6898214544
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | task id: 47556161
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-26 11:34:21,849 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | pilot state: failed 
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | transexitcode: 65
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | exeerrorcode: 65
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | exitcode: 65
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | cpuconsumptiontime: 40 s
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | nevents: 0
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | neventsw: 0
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | pid: 1491168
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | pgrp: 1491168
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | corecount: 12
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | event service: False
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | sizes: {0: 2283436, 1: 2284118, 2: 2284317, 13: 2284317, 16: 2284635, 23: 2284663, 108: 2310296, 110: 2314614, 239: 2314752}
[2025-11-26 11:37:16] 2025-11-26 19:36:40,581 | INFO     | --------------------------------------------------
[2025-11-26 11:37:16] 2025-11-26 19:36:40,582 | INFO     | 
[2025-11-26 11:37:16] 2025-11-26 19:36:40,582 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,605 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,605 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,605 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,605 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:37:16] 2025-11-26 19:36:40,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,605 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:37:16] 2025-11-26 19:36:40,605 | INFO     | job 6898214544 has completed (purged errors)
[2025-11-26 11:37:16] 2025-11-26 19:36:40,605 | INFO     | overall cleanup function is called
[2025-11-26 11:37:16] 2025-11-26 19:36:41,612 | INFO     | --- collectZombieJob: --- 10, [1491168]
[2025-11-26 11:37:16] 2025-11-26 19:36:41,612 | INFO     | zombie collector waiting for pid 1491168
[2025-11-26 11:37:16] 2025-11-26 19:36:41,613 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:37:16] 2025-11-26 19:36:41,613 | INFO     | collected zombie processes
[2025-11-26 11:37:16] 2025-11-26 19:36:41,613 | INFO     | will attempt to kill all subprocesses of pid=1491168
[2025-11-26 11:37:16] 2025-11-26 19:36:42,564 | INFO     | PID=1481716 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 11:37:16] 2025-11-26 19:36:42,564 | INFO     | .. there are 35 such processes running
[2025-11-26 11:37:16] 2025-11-26 19:36:42,901 | INFO     | process IDs to be killed: [1491168] (in reverse order)
[2025-11-26 11:37:16] 2025-11-26 19:36:43,126 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:37:16] 2025-11-26 19:36:43,126 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:37:16] 2025-11-26 19:36:43,169 | INFO     | did not find any defunct processes belonging to 1491168
[2025-11-26 11:37:16] 2025-11-26 19:36:43,269 | INFO     | did not find any defunct processes belonging to 1491168
[2025-11-26 11:37:16] 2025-11-26 19:36:43,271 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:37:16] 2025-11-26 19:36:43,271 | INFO     | ready for new job
[2025-11-26 11:37:16] 2025-11-26 19:36:43,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:37:16] 2025-11-26 19:36:43,272 | INFO     | ***************************************
[2025-11-26 11:37:16] 2025-11-26 19:36:43,273 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:37:16] 2025-11-26 19:36:43,273 | INFO     | ***************************************
[2025-11-26 11:37:16] 2025-11-26 19:36:43,273 | INFO     | 
[2025-11-26 11:37:16] 2025-11-26 19:36:43,279 | INFO     | architecture information:
[2025-11-26 11:37:16] 2025-11-26 19:36:43,280 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:37:16] 2025-11-26 19:36:43,357 | INFO     | cat /etc/os-release:
[2025-11-26 11:37:16] NAME="CentOS Linux"
[2025-11-26 11:37:16] VERSION="7 (Core)"
[2025-11-26 11:37:16] ID="centos"
[2025-11-26 11:37:16] ID_LIKE="rhel fedora"
[2025-11-26 11:37:16] VERSION_ID="7"
[2025-11-26 11:37:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:37:16] ANSI_COLOR="0;31"
[2025-11-26 11:37:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:37:16] HOME_URL="https://www.centos.org/"
[2025-11-26 11:37:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:37:16] 
[2025-11-26 11:37:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:37:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:37:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:37:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:37:16] 
[2025-11-26 11:37:16] 2025-11-26 19:36:43,358 | INFO     | ***************************************
[2025-11-26 11:37:16] 2025-11-26 19:36:43,861 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-26 11:37:16] 2025-11-26 19:36:43,896 | INFO     | sufficient remaining disk space (1586160992256 B)
[2025-11-26 11:37:16] 2025-11-26 19:36:43,896 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:37:16] 2025-11-26 19:36:43,897 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:37:16] 2025-11-26 19:36:43,897 | INFO     | update_server=False
[2025-11-26 11:37:16] 2025-11-26 19:36:43,897 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:37:16] 2025-11-26 19:36:43,897 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:37:16] 2025-11-26 19:36:44,186 | INFO     | all job control threads have been joined
[2025-11-26 11:37:16] 2025-11-26 19:36:44,700 | INFO     | all data control threads have been joined
[2025-11-26 11:37:16] 2025-11-26 19:36:44,777 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:37:16] 2025-11-26 19:36:44,777 | INFO     | aborting loop
[2025-11-26 11:37:16] 2025-11-26 19:36:44,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:37:16] 2025-11-26 19:36:44,902 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:45,077 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:45,166 | INFO     | all payload control threads have been joined
[2025-11-26 11:37:16] 2025-11-26 19:36:45,192 | INFO     | [job] control thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:45,237 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:45,286 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:37:16] 2025-11-26 19:36:45,577 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:45,706 | INFO     | [data] control thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:45,787 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:46,015 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:46,140 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:46,172 | INFO     | [payload] control thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:46,239 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:46,292 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:46,348 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:46,352 | INFO     | [job] validate thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:46,797 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:36:47,906 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:37:16] 2025-11-26 19:37:08,884 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:37:16] 2025-11-26 19:37:09,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140600170317632)>', '<ExcThread(monitor, started 140599629960960)>']
[2025-11-26 11:37:16] 2025-11-26 19:37:14,565 | INFO     | all workflow threads have been joined
[2025-11-26 11:37:16] 2025-11-26 19:37:14,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:37:16] 2025-11-26 19:37:14,566 | INFO     | traces error code: 0
[2025-11-26 11:37:16] 2025-11-26 19:37:14,566 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:37:16] 2025-11-26 19:37:15,525 | INFO     | PID=1481716 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 11:37:16] 2025-11-26 19:37:15,525 | INFO     | .. there are 34 such processes running
[2025-11-26 11:37:16] 2025-11-26 19:37:15,526 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:37:16] 2025-11-26 19:37:15,526 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:37:16] 2025-11-26 19:37:15,526 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:37:16] 2025-11-26 19:37:15,526 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:37:16] 2025-11-26 19:37:15,526 | INFO     | [monitor] control thread has ended
[2025-11-26 11:37:16] 2025-11-26 19:37:15,788 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:37:16] 2025-11-26 19:37:15,790 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:37:16] 2025-11-26 19:37:15,792 [wrapper] pilotpid: 1481716
[2025-11-26 11:37:16] 2025-11-26 19:37:15,794 [wrapper] Pilot exit status: 0
[2025-11-26 11:37:16] 2025-11-26 19:37:15,825 [wrapper] pandaids: 6898214544
[2025-11-26 11:37:16] 2025-11-26 19:37:15,901 [wrapper] cleanup supervisor_pilot 1481727 1481717
[2025-11-26 11:37:16] 2025-11-26 19:37:15,904 [wrapper] Test setup, not cleaning
[2025-11-26 11:37:16] 2025-11-26 19:37:15,905 [wrapper] apfmon messages muted
[2025-11-26 11:37:16] 2025-11-26 19:37:15,934 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:37:16] 2025-11-26 19:37:15,949 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:37:16]  *** Error codes and diagnostics ***
[2025-11-26 11:37:16]     "exeErrorCode": 65,
[2025-11-26 11:37:16]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-26 11:37:16]     "pilotErrorCode": 1305,
[2025-11-26 11:37:16]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-26 11:37:16]  *** Listing of results directory ***
[2025-11-26 11:37:16] total 403580
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc    576529 Nov 25 20:39 pilot3.tar.gz
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc      5112 Nov 25 20:42 queuedata.json
[2025-11-26 11:37:16] -rwx------. 1 boinc boinc     36292 Nov 25 20:43 runpilot2-wrapper.sh
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc       100 Nov 26 11:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:37:16] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 11:31 run_atlas
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc       105 Nov 26 11:31 job.xml
[2025-11-26 11:37:16] -rw-r--r--. 2 boinc boinc 409047597 Nov 26 11:31 EVNT.47483658._002506.pool.root.1
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc      6594 Nov 26 11:31 init_data.xml
[2025-11-26 11:37:16] -rw-r--r--. 2 boinc boinc     15847 Nov 26 11:31 start_atlas.sh
[2025-11-26 11:37:16] drwxrwx--x. 2 boinc boinc      4096 Nov 26 11:31 shared
[2025-11-26 11:37:16] -rw-r--r--. 2 boinc boinc    590107 Nov 26 11:31 input.tar.gz
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc         0 Nov 26 11:31 boinc_lockfile
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc      2785 Nov 26 11:31 pandaJob.out
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc    991522 Nov 26 11:32 agis_schedconf.cvmfs.json
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc   1516240 Nov 26 11:32 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:37:16] drwx------. 5 boinc boinc      4096 Nov 26 11:32 pilot3
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc       524 Nov 26 11:34 boinc_task_state.xml
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc       988 Nov 26 11:34 memory_monitor_summary.json
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc     49229 Nov 26 11:34 log.47556161._004883.job.log.tgz.1
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc     10339 Nov 26 11:36 heartbeat.json
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc      8192 Nov 26 11:37 boinc_mmap_file
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc        23 Nov 26 11:37 wrapper_checkpoint.txt
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc       823 Nov 26 11:37 pilotlog.txt
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc        95 Nov 26 11:37 pilot_heartbeat.json
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc    100791 Nov 26 11:37 log.47556161._004883.job.log.1
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc       186 Nov 26 11:37 output.list
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc       620 Nov 26 11:37 runtime_log
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc    174080 Nov 26 11:37 result.tar.gz
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc      8636 Nov 26 11:37 runtime_log.err
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc       644 Nov 26 11:37 9hQLDmtYMi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmUzMKDmXTIuIn.diag
[2025-11-26 11:37:16] -rw-r--r--. 1 boinc boinc     22547 Nov 26 11:37 stderr.txt
[2025-11-26 11:37:16] No HITS result produced
[2025-11-26 11:37:16]  *** Contents of shared directory: ***
[2025-11-26 11:37:16] total 400236
[2025-11-26 11:37:16] -rw-r--r--. 2 boinc boinc 409047597 Nov 26 11:31 ATLAS.root_0
[2025-11-26 11:37:16] -rw-r--r--. 2 boinc boinc     15847 Nov 26 11:31 start_atlas.sh
[2025-11-26 11:37:16] -rw-r--r--. 2 boinc boinc    590107 Nov 26 11:31 input.tar.gz
[2025-11-26 11:37:16] -rw-------. 1 boinc boinc    174080 Nov 26 11:37 result.tar.gz
11:37:18 (1473801): run_atlas exited; CPU time 44.595911
11:37:18 (1473801): called boinc_finish(0)

</stderr_txt>
]]>

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