Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:59:46 (2694540): wrapper (7.7.26015): starting
13:59:46 (2694540): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 13:59:46] Arguments: --nthreads 8
[2025-11-26 13:59:46] Threads: 8
[2025-11-26 13:59:46] Checking for CVMFS
[2025-11-26 13:59:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:59:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:59:47] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:59:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:59:47] 2.13.3.0 12500 30442 248284 153331 3 851 20315515 32503809 48638 16776704 0 199647172 99.521 236397316 37791 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 13:59:47] CVMFS is ok
[2025-11-26 13:59:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:59:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:59:47] Further information can be found at the LHC@home message board.
[2025-11-26 13:59:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:59:47] Checking for apptainer binary...
[2025-11-26 13:59:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:59:47] Running /usr/bin/apptainer --version
[2025-11-26 13:59:47] apptainer version 1.4.4-1.el9
[2025-11-26 13:59:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:59:47] c7-7-36.aglt2.org
[2025-11-26 13:59:47] apptainer works
[2025-11-26 13:59:47] Set ATHENA_PROC_NUMBER=8
[2025-11-26 13:59:47] Set ATHENA_CORE_NUMBER=8
[2025-11-26 13:59:47] Starting ATLAS job with PandaID=6897661769
[2025-11-26 13:59:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 08:11:48]  *** The last 200 lines of the pilot log: ***
[2025-11-27 08:11:48] 2025-11-27 13:11:12,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,310 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 08:11:48] 2025-11-27 13:11:13,315 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3192.0605625000003
[2025-11-27 08:11:48] 2025-11-27 13:11:13,390 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6897661769/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,391 | INFO     | extracted standard info from prmon json
[2025-11-27 08:11:48] 2025-11-27 13:11:13,391 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 08:11:48] 2025-11-27 13:11:13,391 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 08:11:48] 2025-11-27 13:11:13,407 | INFO     | fitting pss+swap vs Time
[2025-11-27 08:11:48] 2025-11-27 13:11:13,408 | INFO     | sum of square deviations: 381998530835.966
[2025-11-27 08:11:48] 2025-11-27 13:11:13,432 | INFO     | sum of deviations: 2346678085668.1113
[2025-11-27 08:11:48] 2025-11-27 13:11:13,432 | INFO     | mean x: 1764216360.744403
[2025-11-27 08:11:48] 2025-11-27 13:11:13,433 | INFO     | mean y: 2992574.518656716
[2025-11-27 08:11:48] 2025-11-27 13:11:13,433 | INFO     | intersect: -10834870762.484114
[2025-11-27 08:11:48] 2025-11-27 13:11:13,434 | INFO     | chi2: 9.265624564123712
[2025-11-27 08:11:48] 2025-11-27 13:11:13,435 | INFO     | sum of square deviations: 376678362155.6638
[2025-11-27 08:11:48] 2025-11-27 13:11:13,459 | INFO     | sum of deviations: 2728338100890.8804
[2025-11-27 08:11:48] 2025-11-27 13:11:13,459 | INFO     | mean x: 1764216208.2455482
[2025-11-27 08:11:48] 2025-11-27 13:11:13,459 | INFO     | mean y: 3003517.0271790065
[2025-11-27 08:11:48] 2025-11-27 13:11:13,459 | INFO     | intersect: -12775480151.690752
[2025-11-27 08:11:48] 2025-11-27 13:11:13,460 | INFO     | chi2: 6.057525050924281
[2025-11-27 08:11:48] 2025-11-27 13:11:13,461 | INFO     | current chi2=6.057525050924281 (change=34.62367259753994 %)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,462 | INFO     | sum of square deviations: 371407822312.86334
[2025-11-27 08:11:48] 2025-11-27 13:11:13,492 | INFO     | sum of deviations: 2857181444528.833
[2025-11-27 08:11:48] 2025-11-27 13:11:13,492 | INFO     | mean x: 1764216055.7467043
[2025-11-27 08:11:48] 2025-11-27 13:11:13,492 | INFO     | mean y: 3007240.52354049
[2025-11-27 08:11:48] 2025-11-27 13:11:13,492 | INFO     | intersect: -13568826942.261118
[2025-11-27 08:11:48] 2025-11-27 13:11:13,493 | INFO     | chi2: 5.49618512028359
[2025-11-27 08:11:48] 2025-11-27 13:11:13,493 | INFO     | current chi2=5.49618512028359 (change=9.2668197972213 %)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,493 | INFO     | right removable region: 1061
[2025-11-27 08:11:48] 2025-11-27 13:11:13,494 | INFO     | sum of square deviations: 376678202335.6638
[2025-11-27 08:11:48] 2025-11-27 13:11:13,514 | INFO     | sum of deviations: 1906898206864.401
[2025-11-27 08:11:48] 2025-11-27 13:11:13,514 | INFO     | mean x: 1764216513.2455482
[2025-11-27 08:11:48] 2025-11-27 13:11:13,514 | INFO     | mean y: 3005177.9793814435
[2025-11-27 08:11:48] 2025-11-27 13:11:13,514 | INFO     | intersect: -8928176092.315168
[2025-11-27 08:11:48] 2025-11-27 13:11:13,515 | INFO     | chi2: 5.223461542132672
[2025-11-27 08:11:48] 2025-11-27 13:11:13,515 | INFO     | current chi2=5.223461542132672 (change=43.62537024910553 %)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,516 | INFO     | sum of square deviations: 371407502672.8634
[2025-11-27 08:11:48] 2025-11-27 13:11:13,536 | INFO     | sum of deviations: 1709728696270.6792
[2025-11-27 08:11:48] 2025-11-27 13:11:13,537 | INFO     | mean x: 1764216665.7467043
[2025-11-27 08:11:48] 2025-11-27 13:11:13,537 | INFO     | mean y: 3010876.3370998115
[2025-11-27 08:11:48] 2025-11-27 13:11:13,537 | INFO     | intersect: -8118343264.758185
[2025-11-27 08:11:48] 2025-11-27 13:11:13,538 | INFO     | chi2: 4.355968333972244
[2025-11-27 08:11:48] 2025-11-27 13:11:13,538 | INFO     | current chi2=4.355968333972244 (change=16.607630805035882 %)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,538 | INFO     | left removable region: 20
[2025-11-27 08:11:48] 2025-11-27 13:11:13,539 | INFO     | sum of square deviations: 349807678665.56226
[2025-11-27 08:11:48] 2025-11-27 13:11:13,557 | INFO     | sum of deviations: 2018661651440.152
[2025-11-27 08:11:48] 2025-11-27 13:11:13,557 | INFO     | mean x: 1764216635.2507205
[2025-11-27 08:11:48] 2025-11-27 13:11:13,557 | INFO     | mean y: 3031681.4630163303
[2025-11-27 08:11:48] 2025-11-27 13:11:13,558 | INFO     | intersect: -10177866805.383192
[2025-11-27 08:11:48] 2025-11-27 13:11:13,558 | INFO     | chi2: 0.3083424640572458
[2025-11-27 08:11:48] 2025-11-27 13:11:13,558 | INFO     | current memory leak: 5.77 B/s (using 1041 data points, chi2=0.31)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | could have reported an average CPU frequency of 3175 MHz (39 samples)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | ..............................
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | . Timing measurements:
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | . get job = 0 s
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | . initial setup = 3 s
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | . payload setup = 21 s
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | . stage-in = 0 s
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | . payload execution = 65382 s
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | . stage-out = 3 s
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | . log creation = 0 s
[2025-11-27 08:11:48] 2025-11-27 13:11:13,560 | INFO     | ..............................
[2025-11-27 08:11:48] 2025-11-27 13:11:13,649 | INFO     | 
[2025-11-27 08:11:48] 2025-11-27 13:11:13,653 | INFO     | job summary report
[2025-11-27 08:11:48] 2025-11-27 13:11:13,653 | INFO     | --------------------------------------------------
[2025-11-27 08:11:48] 2025-11-27 13:11:13,653 | INFO     | PanDA job id: 6897661769
[2025-11-27 08:11:48] 2025-11-27 13:11:13,653 | INFO     | task id: 47556161
[2025-11-27 08:11:48] 2025-11-27 13:11:13,653 | INFO     | errors: (none)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,653 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 08:11:48] 2025-11-27 13:11:13,653 | INFO     | pilot state: finished 
[2025-11-27 08:11:48] 2025-11-27 13:11:13,653 | INFO     | transexitcode: 0
[2025-11-27 08:11:48] 2025-11-27 13:11:13,653 | INFO     | exeerrorcode: 0
[2025-11-27 08:11:48] 2025-11-27 13:11:13,653 | INFO     | exeerrordiag: 
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | exitcode: 0
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | exitmsg: OK
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | cpuconsumptiontime: 193665 s
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | nevents: 1000
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | neventsw: 0
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | pid: 2728557
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | pgrp: 2728557
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | corecount: 8
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | event service: False
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | sizes: {0: 2284265, 1: 2284265, 11: 2284293, 13: 2284583, 22: 2284639, 65405: 2340034, 65409: 2349028, 65411: 2349084, 65419: 2349330}
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | --------------------------------------------------
[2025-11-27 08:11:48] 2025-11-27 13:11:13,654 | INFO     | 
[2025-11-27 08:11:48] 2025-11-27 13:11:13,655 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-27 08:11:48] 2025-11-27 13:11:13,661 | INFO     | time since job start (65455s) is within the limit (172800.0s)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,675 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,676 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,676 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,676 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,676 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,676 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,676 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,676 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,676 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,676 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,676 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,677 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,677 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,677 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,677 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,677 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,677 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,677 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,677 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,677 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 08:11:48] 2025-11-27 13:11:13,678 | INFO     | job 6897661769 has completed (purged errors)
[2025-11-27 08:11:48] 2025-11-27 13:11:13,678 | INFO     | overall cleanup function is called
[2025-11-27 08:11:48] 2025-11-27 13:11:14,697 | INFO     | --- collectZombieJob: --- 10, [2728557]
[2025-11-27 08:11:48] 2025-11-27 13:11:14,697 | INFO     | zombie collector waiting for pid 2728557
[2025-11-27 08:11:48] 2025-11-27 13:11:14,697 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 08:11:48] 2025-11-27 13:11:14,697 | INFO     | collected zombie processes
[2025-11-27 08:11:48] 2025-11-27 13:11:14,697 | INFO     | will attempt to kill all subprocesses of pid=2728557
[2025-11-27 08:11:48] 2025-11-27 13:11:15,439 | INFO     | process IDs to be killed: [2728557] (in reverse order)
[2025-11-27 08:11:48] 2025-11-27 13:11:15,691 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 08:11:48] 2025-11-27 13:11:15,692 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 08:11:48] 2025-11-27 13:11:15,723 | INFO     | did not find any defunct processes belonging to 2728557
[2025-11-27 08:11:48] 2025-11-27 13:11:15,753 | INFO     | did not find any defunct processes belonging to 2728557
[2025-11-27 08:11:48] 2025-11-27 13:11:15,754 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 08:11:48] 2025-11-27 13:11:15,754 | INFO     | ready for new job
[2025-11-27 08:11:48] 2025-11-27 13:11:15,754 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 08:11:48] 2025-11-27 13:11:15,759 | INFO     | ***************************************
[2025-11-27 08:11:48] 2025-11-27 13:11:15,759 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 08:11:48] 2025-11-27 13:11:15,759 | INFO     | ***************************************
[2025-11-27 08:11:48] 2025-11-27 13:11:15,759 | INFO     | 
[2025-11-27 08:11:48] 2025-11-27 13:11:15,764 | INFO     | architecture information:
[2025-11-27 08:11:48] 2025-11-27 13:11:15,765 | INFO     | executing command: cat /etc/os-release
[2025-11-27 08:11:48] 2025-11-27 13:11:15,786 | INFO     | cat /etc/os-release:
[2025-11-27 08:11:48] NAME="CentOS Linux"
[2025-11-27 08:11:48] VERSION="7 (Core)"
[2025-11-27 08:11:48] ID="centos"
[2025-11-27 08:11:48] ID_LIKE="rhel fedora"
[2025-11-27 08:11:48] VERSION_ID="7"
[2025-11-27 08:11:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 08:11:48] ANSI_COLOR="0;31"
[2025-11-27 08:11:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 08:11:48] HOME_URL="https://www.centos.org/"
[2025-11-27 08:11:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 08:11:48] 
[2025-11-27 08:11:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 08:11:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 08:11:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 08:11:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 08:11:48] 
[2025-11-27 08:11:48] 2025-11-27 13:11:15,786 | INFO     | ***************************************
[2025-11-27 08:11:48] 2025-11-27 13:11:16,289 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-27 08:11:48] 2025-11-27 13:11:16,313 | INFO     | sufficient remaining disk space (85004910592 B)
[2025-11-27 08:11:48] 2025-11-27 13:11:16,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 08:11:48] 2025-11-27 13:11:16,314 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 08:11:48] 2025-11-27 13:11:16,314 | INFO     | update_server=False
[2025-11-27 08:11:48] 2025-11-27 13:11:16,314 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 08:11:48] 2025-11-27 13:11:16,428 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:11:48] 2025-11-27 13:11:16,429 | INFO     | aborting loop
[2025-11-27 08:11:48] 2025-11-27 13:11:16,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 08:11:48] 2025-11-27 13:11:16,615 | INFO     | all payload control threads have been joined
[2025-11-27 08:11:48] 2025-11-27 13:11:16,813 | INFO     | all data control threads have been joined
[2025-11-27 08:11:48] 2025-11-27 13:11:17,011 | INFO     | all job control threads have been joined
[2025-11-27 08:11:48] 2025-11-27 13:11:17,231 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 08:11:48] 2025-11-27 13:11:17,319 | INFO     | [job] retrieve thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:17,331 | INFO     | [payload] validate_post thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:17,434 | INFO     | [job] job monitor thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:17,578 | INFO     | [payload] failed_post thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:17,636 | INFO     | [payload] control thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:17,676 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:17,724 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:17,819 | INFO     | [data] control thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:17,944 | INFO     | [job] validate thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:18,018 | INFO     | [job] control thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:18,506 | INFO     | [data] copytool_in thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:18,621 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:18,662 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 08:11:48] 2025-11-27 13:11:19,238 | INFO     | [data] copytool_out thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:19,249 | INFO     | [monitor] cgroup control has ended
[2025-11-27 08:11:48] 2025-11-27 13:11:19,668 | INFO     | [job] queue monitor thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:20,629 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:26,506 | INFO     | job.realtimelogging is not enabled
[2025-11-27 08:11:48] 2025-11-27 13:11:27,512 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 08:11:48] 2025-11-27 13:11:29,518 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140236926773056)>', '<ExcThread(monitor, started 140236428396288)>']
[2025-11-27 08:11:48] 2025-11-27 13:11:34,544 | INFO     | all workflow threads have been joined
[2025-11-27 08:11:48] 2025-11-27 13:11:34,545 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 08:11:48] 2025-11-27 13:11:34,545 | INFO     | traces error code: 0
[2025-11-27 08:11:48] 2025-11-27 13:11:34,545 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 08:11:48] 2025-11-27 13:11:47,667 | INFO     | PID=2709531 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 08:11:48] 2025-11-27 13:11:47,667 | INFO     | .. there are 73 such processes running
[2025-11-27 08:11:48] 2025-11-27 13:11:47,668 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 08:11:48] 2025-11-27 13:11:47,668 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 08:11:48] 2025-11-27 13:11:47,668 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 08:11:48] 2025-11-27 13:11:47,668 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 08:11:48] 2025-11-27 13:11:47,668 | INFO     | [monitor] control thread has ended
[2025-11-27 08:11:48] 2025-11-27 13:11:47,887 [wrapper] ==== pilot stdout END ====
[2025-11-27 08:11:48] 2025-11-27 13:11:47,895 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 08:11:48] 2025-11-27 13:11:47,953 [wrapper] pilotpid: 2709531
[2025-11-27 08:11:48] 2025-11-27 13:11:47,963 [wrapper] Pilot exit status: 0
[2025-11-27 08:11:48] 2025-11-27 13:11:47,976 [wrapper] pandaids: 6897661769
[2025-11-27 08:11:48] 2025-11-27 13:11:48,129 [wrapper] cleanup supervisor_pilot 1784801 2709532
[2025-11-27 08:11:48] 2025-11-27 13:11:48,132 [wrapper] Test setup, not cleaning
[2025-11-27 08:11:48] 2025-11-27 13:11:48,140 [wrapper] apfmon messages muted
[2025-11-27 08:11:48] 2025-11-27 13:11:48,145 [wrapper] ==== wrapper stdout END ====
[2025-11-27 08:11:48] 2025-11-27 13:11:48,148 [wrapper] ==== wrapper stderr END ====
[2025-11-27 08:11:48]  *** Error codes and diagnostics ***
[2025-11-27 08:11:48]     "exeErrorCode": 0,
[2025-11-27 08:11:48]     "exeErrorDiag": "",
[2025-11-27 08:11:48]     "pilotErrorCode": 0,
[2025-11-27 08:11:48]     "pilotErrorDiag": "",
[2025-11-27 08:11:48]  *** Listing of results directory ***
[2025-11-27 08:11:48] total 1307084
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 08:11:48] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas       100 Nov 26 13:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 08:11:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 13:59 run_atlas
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas       105 Nov 26 13:59 job.xml
[2025-11-27 08:11:48] -rw-r--r--. 2 boincer umatlas 408791223 Nov 26 13:59 EVNT.47483658._002314.pool.root.1
[2025-11-27 08:11:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 13:59 start_atlas.sh
[2025-11-27 08:11:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 13:59 shared
[2025-11-27 08:11:48] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 13:59 input.tar.gz
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas         0 Nov 26 13:59 boinc_lockfile
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 13:59 pandaJob.out
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas        57 Nov 26 13:59 setup.sh.local
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas    991522 Nov 26 14:00 agis_schedconf.cvmfs.json
[2025-11-27 08:11:48] drwx------. 5 boincer umatlas      4096 Nov 26 14:00 pilot3
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas       533 Nov 27 08:00 boinc_task_state.xml
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas      6949 Nov 27 08:09 init_data.xml
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas 905527657 Nov 27 08:10 HITS.47556161._002977.pool.root.1
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas      1072 Nov 27 08:10 memory_monitor_summary.json
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas   1516240 Nov 27 08:11 agis_ddmendpoints.agis.ALL.json
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas   2189443 Nov 27 08:11 log.47556161._002977.job.log.tgz.1
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas      8630 Nov 27 08:11 heartbeat.json
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas        29 Nov 27 08:11 wrapper_checkpoint.txt
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas       823 Nov 27 08:11 pilotlog.txt
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas        95 Nov 27 08:11 pilot_heartbeat.json
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 08:11 boinc_mmap_file
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas   7914668 Nov 27 08:11 log.47556161._002977.job.log.1
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas       353 Nov 27 08:11 output.list
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas       620 Nov 27 08:11 runtime_log
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas  10127360 Nov 27 08:11 result.tar.gz
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 08:11 runtime_log.err
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas       665 Nov 27 08:11 50bKDmXbBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvhJKDmgFW1Wo.diag
[2025-11-27 08:11:48] -rw-r--r--. 1 boincer umatlas     21326 Nov 27 08:11 stderr.txt
[2025-11-27 08:11:48] HITS file was successfully produced:
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas 905527657 Nov 27 08:10 shared/HITS.pool.root.1
[2025-11-27 08:11:48]  *** Contents of shared directory: ***
[2025-11-27 08:11:48] total 1294016
[2025-11-27 08:11:48] -rw-r--r--. 2 boincer umatlas 408791223 Nov 26 13:59 ATLAS.root_0
[2025-11-27 08:11:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 13:59 start_atlas.sh
[2025-11-27 08:11:48] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 13:59 input.tar.gz
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas 905527657 Nov 27 08:10 HITS.pool.root.1
[2025-11-27 08:11:48] -rw-------. 1 boincer umatlas  10127360 Nov 27 08:11 result.tar.gz
08:11:50 (2694540): run_atlas exited; CPU time 195771.141885
08:11:50 (2694540): called boinc_finish(0)

</stderr_txt>
]]>

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