Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:54 (1347702): wrapper (7.7.26015): starting
19:01:54 (1347702): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:01:54] Arguments: --nthreads 8
[2025-11-26 19:01:54] Threads: 8
[2025-11-26 19:01:54] Checking for CVMFS
[2025-11-26 19:01:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:01:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:01:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:01:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:01:55] 2.13.3.0 12525 30608 243800 153340 2 843 29209328 40960001 46694 16776704 0 242967020 99.717 187652269 35227 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:01:55] CVMFS is ok
[2025-11-26 19:01:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:01:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:01:55] Further information can be found at the LHC@home message board.
[2025-11-26 19:01:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:01:55] Checking for apptainer binary...
[2025-11-26 19:01:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:01:55] Running /usr/bin/apptainer --version
[2025-11-26 19:01:55] apptainer version 1.4.4-1.el9
[2025-11-26 19:01:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:01:56] c7-4-30.aglt2.org
[2025-11-26 19:01:56] apptainer works
[2025-11-26 19:01:56] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:01:56] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:01:56] Starting ATLAS job with PandaID=6897863657
[2025-11-26 19:01:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 19:00:32]  *** The last 200 lines of the pilot log: ***
[2025-11-27 19:00:32] 2025-11-27 23:59:39,777 | INFO     | sum of deviations: 5466840066918.016
[2025-11-27 19:00:32] 2025-11-27 23:59:39,778 | INFO     | mean x: 1764244742.8507462
[2025-11-27 19:00:32] 2025-11-27 23:59:39,778 | INFO     | mean y: 2943218.604832978
[2025-11-27 19:00:32] 2025-11-27 23:59:39,778 | INFO     | intersect: -11163954358.205317
[2025-11-27 19:00:32] 2025-11-27 23:59:39,779 | INFO     | chi2: 9.338532372328338
[2025-11-27 19:00:32] 2025-11-27 23:59:39,779 | INFO     | current chi2=9.338532372328338 (change=27.43305976437796 %)
[2025-11-27 19:00:32] 2025-11-27 23:59:39,780 | INFO     | sum of square deviations: 854524620922.2319
[2025-11-27 19:00:32] 2025-11-27 23:59:39,818 | INFO     | sum of deviations: 5815304184598.898
[2025-11-27 19:00:32] 2025-11-27 23:59:39,818 | INFO     | mean x: 1764244590.3530672
[2025-11-27 19:00:32] 2025-11-27 23:59:39,818 | INFO     | mean y: 2949002.919400856
[2025-11-27 19:00:32] 2025-11-27 23:59:39,818 | INFO     | intersect: -12003280774.127434
[2025-11-27 19:00:32] 2025-11-27 23:59:39,819 | INFO     | chi2: 6.8521588359171135
[2025-11-27 19:00:32] 2025-11-27 23:59:39,819 | INFO     | current chi2=6.8521588359171135 (change=26.62488533828691 %)
[2025-11-27 19:00:32] 2025-11-27 23:59:39,821 | INFO     | sum of square deviations: 845414781582.2106
[2025-11-27 19:00:32] 2025-11-27 23:59:39,860 | INFO     | sum of deviations: 5774923182797.361
[2025-11-27 19:00:32] 2025-11-27 23:59:39,860 | INFO     | mean x: 1764244437.853973
[2025-11-27 19:00:32] 2025-11-27 23:59:39,860 | INFO     | mean y: 2948326.9234073013
[2025-11-27 19:00:32] 2025-11-27 23:59:39,860 | INFO     | intersect: -12048385913.077055
[2025-11-27 19:00:32] 2025-11-27 23:59:39,861 | INFO     | chi2: 6.848937472732476
[2025-11-27 19:00:32] 2025-11-27 23:59:39,861 | INFO     | current chi2=6.848937472732476 (change=0.0470123834221756 %)
[2025-11-27 19:00:32] 2025-11-27 23:59:39,861 | INFO     | right removable region: 1396
[2025-11-27 19:00:32] 2025-11-27 23:59:39,863 | INFO     | sum of square deviations: 863698769330.6481
[2025-11-27 19:00:32] 2025-11-27 23:59:39,899 | INFO     | sum of deviations: 4392372573467.684
[2025-11-27 19:00:32] 2025-11-27 23:59:39,899 | INFO     | mean x: 1764245047.8507462
[2025-11-27 19:00:32] 2025-11-27 23:59:39,900 | INFO     | mean y: 2944013.393745558
[2025-11-27 19:00:32] 2025-11-27 23:59:39,900 | INFO     | intersect: -8969190527.287973
[2025-11-27 19:00:32] 2025-11-27 23:59:39,901 | INFO     | chi2: 8.960931124853222
[2025-11-27 19:00:32] 2025-11-27 23:59:39,901 | INFO     | current chi2=8.960931124853222 (change=30.36728605025753 %)
[2025-11-27 19:00:32] 2025-11-27 23:59:39,902 | INFO     | sum of square deviations: 854523246164.5259
[2025-11-27 19:00:32] 2025-11-27 23:59:39,939 | INFO     | sum of deviations: 3949564407647.722
[2025-11-27 19:00:32] 2025-11-27 23:59:39,940 | INFO     | mean x: 1764245200.3537803
[2025-11-27 19:00:32] 2025-11-27 23:59:39,940 | INFO     | mean y: 2951371.4279600573
[2025-11-27 19:00:32] 2025-11-27 23:59:39,940 | INFO     | intersect: -8151303156.995984
[2025-11-27 19:00:32] 2025-11-27 23:59:39,941 | INFO     | chi2: 6.617683331287837
[2025-11-27 19:00:32] 2025-11-27 23:59:39,941 | INFO     | current chi2=6.617683331287837 (change=26.149601653184973 %)
[2025-11-27 19:00:32] 2025-11-27 23:59:39,942 | INFO     | sum of square deviations: 845413190457.5034
[2025-11-27 19:00:32] 2025-11-27 23:59:40,013 | INFO     | sum of deviations: 3832662792953.2583
[2025-11-27 19:00:32] 2025-11-27 23:59:40,013 | INFO     | mean x: 1764245352.8546886
[2025-11-27 19:00:32] 2025-11-27 23:59:40,013 | INFO     | mean y: 2953328.493915533
[2025-11-27 19:00:32] 2025-11-27 23:59:40,017 | INFO     | intersect: -7995215611.675646
[2025-11-27 19:00:32] 2025-11-27 23:59:40,018 | INFO     | chi2: 6.546437651661745
[2025-11-27 19:00:32] 2025-11-27 23:59:40,018 | INFO     | current chi2=6.546437651661745 (change=1.0765954800110817 %)
[2025-11-27 19:00:32] 2025-11-27 23:59:40,018 | INFO     | left removable region: 30
[2025-11-27 19:00:32] 2025-11-27 23:59:40,019 | INFO     | sum of square deviations: 790373576297.6267
[2025-11-27 19:00:32] 2025-11-27 23:59:40,095 | INFO     | sum of deviations: 4340367319778.212
[2025-11-27 19:00:32] 2025-11-27 23:59:40,096 | INFO     | mean x: 1764245322.362372
[2025-11-27 19:00:32] 2025-11-27 23:59:40,096 | INFO     | mean y: 2972502.9106881404
[2025-11-27 19:00:32] 2025-11-27 23:59:40,096 | INFO     | intersect: -9685449492.575764
[2025-11-27 19:00:32] 2025-11-27 23:59:40,097 | INFO     | chi2: 0.3090152439956844
[2025-11-27 19:00:32] 2025-11-27 23:59:40,097 | INFO     | current memory leak: 5.49 B/s (using 1366 data points, chi2=0.31)
[2025-11-27 19:00:32] 2025-11-27 23:59:40,102 | INFO     | could have reported an average CPU frequency of 3124 MHz (51 samples)
[2025-11-27 19:00:32] 2025-11-27 23:59:40,103 | INFO     | ..............................
[2025-11-27 19:00:32] 2025-11-27 23:59:40,103 | INFO     | . Timing measurements:
[2025-11-27 19:00:32] 2025-11-27 23:59:40,103 | INFO     | . get job = 0 s
[2025-11-27 19:00:32] 2025-11-27 23:59:40,103 | INFO     | . initial setup = 6 s
[2025-11-27 19:00:32] 2025-11-27 23:59:40,103 | INFO     | . payload setup = 27 s
[2025-11-27 19:00:32] 2025-11-27 23:59:40,103 | INFO     | . stage-in = 0 s
[2025-11-27 19:00:32] 2025-11-27 23:59:40,103 | INFO     | . payload execution = 86115 s
[2025-11-27 19:00:32] 2025-11-27 23:59:40,103 | INFO     | . stage-out = 8 s
[2025-11-27 19:00:32] 2025-11-27 23:59:40,103 | INFO     | . log creation = 2 s
[2025-11-27 19:00:32] 2025-11-27 23:59:40,103 | INFO     | ..............................
[2025-11-27 19:00:32] 2025-11-27 23:59:40,594 | INFO     | 
[2025-11-27 19:00:32] 2025-11-27 23:59:40,599 | INFO     | job summary report
[2025-11-27 19:00:32] 2025-11-27 23:59:40,599 | INFO     | --------------------------------------------------
[2025-11-27 19:00:32] 2025-11-27 23:59:40,599 | INFO     | PanDA job id: 6897863657
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | task id: 47556161
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | errors: (none)
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | pilot state: finished 
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | transexitcode: 0
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | exeerrorcode: 0
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | exeerrordiag: 
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | exitcode: 0
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | exitmsg: OK
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | cpuconsumptiontime: 209247 s
[2025-11-27 19:00:32] 2025-11-27 23:59:40,600 | INFO     | nevents: 1000
[2025-11-27 19:00:32] 2025-11-27 23:59:40,601 | INFO     | neventsw: 0
[2025-11-27 19:00:32] 2025-11-27 23:59:40,601 | INFO     | pid: 1371510
[2025-11-27 19:00:32] 2025-11-27 23:59:40,601 | INFO     | pgrp: 1371510
[2025-11-27 19:00:32] 2025-11-27 23:59:40,601 | INFO     | corecount: 8
[2025-11-27 19:00:32] 2025-11-27 23:59:40,601 | INFO     | event service: False
[2025-11-27 19:00:32] 2025-11-27 23:59:40,601 | INFO     | sizes: {0: 2284038, 1: 2284293, 2: 2284293, 12: 2284321, 21: 2284611, 23: 2284639, 86146: 2348330, 86155: 2357380, 86168: 2357570}
[2025-11-27 19:00:32] 2025-11-27 23:59:40,601 | INFO     | --------------------------------------------------
[2025-11-27 19:00:32] 2025-11-27 23:59:40,601 | INFO     | 
[2025-11-27 19:00:32] 2025-11-27 23:59:40,601 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-27 19:00:32] 2025-11-27 23:59:40,676 | INFO     | time since job start (86212s) is within the limit (172800.0s)
[2025-11-27 19:00:32] 2025-11-27 23:59:40,738 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,739 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,739 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,739 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,739 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,739 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,739 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,739 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,739 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,739 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,739 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,740 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,740 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,740 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,740 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,740 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,740 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,740 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 19:00:32] 2025-11-27 23:59:40,740 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,740 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 19:00:32] 2025-11-27 23:59:40,740 | INFO     | job 6897863657 has completed (purged errors)
[2025-11-27 19:00:32] 2025-11-27 23:59:40,741 | INFO     | overall cleanup function is called
[2025-11-27 19:00:32] 2025-11-27 23:59:41,776 | INFO     | --- collectZombieJob: --- 10, [1371510]
[2025-11-27 19:00:32] 2025-11-27 23:59:41,776 | INFO     | zombie collector waiting for pid 1371510
[2025-11-27 19:00:32] 2025-11-27 23:59:41,776 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 19:00:32] 2025-11-27 23:59:41,776 | INFO     | collected zombie processes
[2025-11-27 19:00:32] 2025-11-27 23:59:41,776 | INFO     | will attempt to kill all subprocesses of pid=1371510
[2025-11-27 19:00:32] 2025-11-27 23:59:48,071 | INFO     | PID=1355626 has CPU usage=17.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 19:00:32] 2025-11-27 23:59:48,071 | INFO     | .. there are 66 such processes running
[2025-11-27 19:00:32] 2025-11-27 23:59:48,145 | INFO     | process IDs to be killed: [1371510] (in reverse order)
[2025-11-27 19:00:32] 2025-11-27 23:59:48,357 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 19:00:32] 2025-11-27 23:59:48,357 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 19:00:32] 2025-11-27 23:59:48,387 | INFO     | did not find any defunct processes belonging to 1371510
[2025-11-27 19:00:32] 2025-11-27 23:59:48,416 | INFO     | did not find any defunct processes belonging to 1371510
[2025-11-27 19:00:32] 2025-11-27 23:59:48,417 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 19:00:32] 2025-11-27 23:59:48,417 | INFO     | ready for new job
[2025-11-27 19:00:32] 2025-11-27 23:59:48,418 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 19:00:32] 2025-11-27 23:59:48,432 | INFO     | ***************************************
[2025-11-27 19:00:32] 2025-11-27 23:59:48,432 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 19:00:32] 2025-11-27 23:59:48,432 | INFO     | ***************************************
[2025-11-27 19:00:32] 2025-11-27 23:59:48,432 | INFO     | 
[2025-11-27 19:00:32] 2025-11-27 23:59:48,459 | INFO     | architecture information:
[2025-11-27 19:00:32] 2025-11-27 23:59:48,486 | INFO     | executing command: cat /etc/os-release
[2025-11-27 19:00:32] 2025-11-27 23:59:48,568 | INFO     | cat /etc/os-release:
[2025-11-27 19:00:32] NAME="CentOS Linux"
[2025-11-27 19:00:32] VERSION="7 (Core)"
[2025-11-27 19:00:32] ID="centos"
[2025-11-27 19:00:32] ID_LIKE="rhel fedora"
[2025-11-27 19:00:32] VERSION_ID="7"
[2025-11-27 19:00:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 19:00:32] ANSI_COLOR="0;31"
[2025-11-27 19:00:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 19:00:32] HOME_URL="https://www.centos.org/"
[2025-11-27 19:00:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 19:00:32] 
[2025-11-27 19:00:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 19:00:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 19:00:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 19:00:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 19:00:32] 
[2025-11-27 19:00:32] 2025-11-27 23:59:48,570 | INFO     | ***************************************
[2025-11-27 19:00:32] 2025-11-27 23:59:49,073 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-27 19:00:32] 2025-11-27 23:59:49,147 | INFO     | sufficient remaining disk space (122988527616 B)
[2025-11-27 19:00:32] 2025-11-27 23:59:49,148 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 19:00:32] 2025-11-27 23:59:49,149 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 19:00:32] 2025-11-27 23:59:49,149 | INFO     | update_server=False
[2025-11-27 19:00:32] 2025-11-27 23:59:49,149 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 19:00:32] 2025-11-27 23:59:49,519 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:00:32] 2025-11-27 23:59:49,736 | INFO     | all data control threads have been joined
[2025-11-27 19:00:32] 2025-11-27 23:59:49,779 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 19:00:32] 2025-11-27 23:59:49,779 | INFO     | aborting loop
[2025-11-27 19:00:32] 2025-11-27 23:59:49,972 | INFO     | all job control threads have been joined
[2025-11-27 19:00:32] 2025-11-27 23:59:50,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 19:00:32] 2025-11-27 23:59:50,157 | INFO     | [job] retrieve thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:50,221 | INFO     | [data] copytool_in thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:50,242 | INFO     | all payload control threads have been joined
[2025-11-27 19:00:32] 2025-11-27 23:59:50,261 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:50,269 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:50,525 | INFO     | [job] queue monitor thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:50,742 | INFO     | [data] control thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:50,771 | INFO     | [payload] validate_post thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:50,784 | INFO     | [job] job monitor thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:50,984 | INFO     | [job] control thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:51,000 | INFO     | [payload] failed_post thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:51,248 | INFO     | [payload] control thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:51,256 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:51,257 | INFO     | [job] validate thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:51,260 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:51,308 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 19:00:32] 2025-11-27 23:59:52,115 | INFO     | [data] copytool_out thread has finished
[2025-11-27 19:00:32] 2025-11-27 23:59:55,320 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 19:00:32] 2025-11-28 00:00:21,415 | INFO     | PID=1355626 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 19:00:32] 2025-11-28 00:00:21,415 | INFO     | .. there are 66 such processes running
[2025-11-27 19:00:32] 2025-11-28 00:00:21,415 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 19:00:32] 2025-11-28 00:00:21,415 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 19:00:32] 2025-11-28 00:00:21,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 19:00:32] 2025-11-28 00:00:26,392 | INFO     | [monitor] cgroup control has ended
[2025-11-27 19:00:32] 2025-11-28 00:00:26,541 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139640147961664)>', '<ExcThread(monitor, started 139639866230528)>']
[2025-11-27 19:00:32] 2025-11-28 00:00:27,452 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 19:00:32] 2025-11-28 00:00:27,452 | INFO     | [monitor] control thread has ended
[2025-11-27 19:00:32] 2025-11-28 00:00:31,569 | INFO     | all workflow threads have been joined
[2025-11-27 19:00:32] 2025-11-28 00:00:31,569 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 19:00:32] 2025-11-28 00:00:31,571 | INFO     | traces error code: 0
[2025-11-27 19:00:32] 2025-11-28 00:00:31,575 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 19:00:32] 2025-11-28 00:00:32,478 [wrapper] ==== pilot stdout END ====
[2025-11-27 19:00:32] 2025-11-28 00:00:32,512 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 19:00:32] 2025-11-28 00:00:32,516 [wrapper] pilotpid: 1355626
[2025-11-27 19:00:32] 2025-11-28 00:00:32,520 [wrapper] Pilot exit status: 0
[2025-11-27 19:00:32] 2025-11-28 00:00:32,537 [wrapper] pandaids: 6897863657
[2025-11-27 19:00:32] 2025-11-28 00:00:32,741 [wrapper] cleanup supervisor_pilot 1066871 1355627
[2025-11-27 19:00:32] 2025-11-28 00:00:32,754 [wrapper] Test setup, not cleaning
[2025-11-27 19:00:32] 2025-11-28 00:00:32,759 [wrapper] apfmon messages muted
[2025-11-27 19:00:32] 2025-11-28 00:00:32,767 [wrapper] ==== wrapper stdout END ====
[2025-11-27 19:00:32] 2025-11-28 00:00:32,771 [wrapper] ==== wrapper stderr END ====
[2025-11-27 19:00:32]  *** Error codes and diagnostics ***
[2025-11-27 19:00:32]     "exeErrorCode": 0,
[2025-11-27 19:00:32]     "exeErrorDiag": "",
[2025-11-27 19:00:32]     "pilotErrorCode": 0,
[2025-11-27 19:00:32]     "pilotErrorDiag": "",
[2025-11-27 19:00:32]  *** Listing of results directory ***
[2025-11-27 19:00:32] total 1328908
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 19:00:32] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 19:00:32] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:01 run_atlas
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:01 job.xml
[2025-11-27 19:00:32] -rw-r--r--. 2 boincer umatlas 410805053 Nov 26 19:01 EVNT.47483658._002331.pool.root.1
[2025-11-27 19:00:32] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:01 shared
[2025-11-27 19:00:32] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 19:01 input.tar.gz
[2025-11-27 19:00:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:01 start_atlas.sh
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:01 boinc_lockfile
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 19:01 pandaJob.out
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas        57 Nov 26 19:01 setup.sh.local
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas    991538 Nov 26 19:02 agis_schedconf.cvmfs.json
[2025-11-27 19:00:32] drwx------. 5 boincer umatlas      4096 Nov 26 19:02 pilot3
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas       533 Nov 27 18:49 boinc_task_state.xml
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas      6948 Nov 27 18:58 init_data.xml
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas 921713827 Nov 27 18:58 HITS.47556161._003136.pool.root.1
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas      1068 Nov 27 18:59 memory_monitor_summary.json
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas   1516240 Nov 27 18:59 agis_ddmendpoints.agis.ALL.json
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas   2371987 Nov 27 18:59 log.47556161._003136.job.log.tgz.1
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas      8620 Nov 27 18:59 heartbeat.json
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas        95 Nov 27 18:59 pilot_heartbeat.json
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas        29 Nov 27 19:00 wrapper_checkpoint.txt
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 19:00 boinc_mmap_file
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas      4825 Nov 27 19:00 pilotlog.txt
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas   9809279 Nov 27 19:00 log.47556161._003136.job.log.1
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas       353 Nov 27 19:00 output.list
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas       620 Nov 27 19:00 runtime_log
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas  12195840 Nov 27 19:00 result.tar.gz
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas       664 Nov 27 19:00 YaDODmXbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmNdMKDmHXi1ln.diag
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 19:00 runtime_log.err
[2025-11-27 19:00:32] -rw-r--r--. 1 boincer umatlas     21305 Nov 27 19:00 stderr.txt
[2025-11-27 19:00:32] HITS file was successfully produced:
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas 921713827 Nov 27 18:58 shared/HITS.pool.root.1
[2025-11-27 19:00:32]  *** Contents of shared directory: ***
[2025-11-27 19:00:32] total 1313808
[2025-11-27 19:00:32] -rw-r--r--. 2 boincer umatlas 410805053 Nov 26 19:01 ATLAS.root_0
[2025-11-27 19:00:32] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 19:01 input.tar.gz
[2025-11-27 19:00:32] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:01 start_atlas.sh
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas 921713827 Nov 27 18:58 HITS.pool.root.1
[2025-11-27 19:00:32] -rw-------. 1 boincer umatlas  12195840 Nov 27 19:00 result.tar.gz
19:00:34 (1347702): run_atlas exited; CPU time 211716.161361
19:00:34 (1347702): called boinc_finish(0)

</stderr_txt>
]]>

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