Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:32:01 (32670): wrapper (7.7.26015): starting
23:32:01 (32670): wrapper: running run_atlas (--nthreads 8)
[2025-11-28 23:32:01] Arguments: --nthreads 8
[2025-11-28 23:32:01] Threads: 8
[2025-11-28 23:32:01] Checking for CVMFS
[2025-11-28 23:32:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-28 23:32:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-28 23:32:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-28 23:32:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-28 23:32:04] 2.11.2.0 11529 226015 140084 153421 3 84 13006237 25165824 1335 130560 9 94052001 99.894 41451970 2470 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-28 23:32:04] CVMFS is ok
[2025-11-28 23:32:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-28 23:32:04] Checking for apptainer binary...
[2025-11-28 23:32:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-28 23:32:04] Running /usr/bin/apptainer --version
[2025-11-28 23:32:04] apptainer version 1.3.2-1.el7
[2025-11-28 23:32:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-28 23:32:26] cg-vwn354.simple-grid.lan
[2025-11-28 23:32:26] apptainer works
[2025-11-28 23:32:26] Set ATHENA_PROC_NUMBER=8
[2025-11-28 23:32:26] Set ATHENA_CORE_NUMBER=8
[2025-11-28 23:32:26] Starting ATLAS job with PandaID=6897531609
[2025-11-28 23:32:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 22:44:51]  *** The last 200 lines of the pilot log: ***
[2025-11-29 22:44:51] 2025-11-29 21:44:05,788 | INFO     | monitor loop #5624: job 0:6897531609 is in state 'finished'
[2025-11-29 22:44:51] 2025-11-29 21:44:05,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 22:44:51] 2025-11-29 21:44:05,808 | INFO     | time since job start (83290s) is within the limit (172800.0s)
[2025-11-29 22:44:51] 2025-11-29 21:44:07,821 | INFO     | time since job start (83292s) is within the limit (172800.0s)
[2025-11-29 22:44:51] 2025-11-29 21:44:08,294 | INFO     | monitor loop #5625: job 0:6897531609 is in state 'finished'
[2025-11-29 22:44:51] 2025-11-29 21:44:08,295 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 22:44:51] 2025-11-29 21:44:09,834 | INFO     | time since job start (83294s) is within the limit (172800.0s)
[2025-11-29 22:44:51] 2025-11-29 21:44:09,835 | INFO     | 83302s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-29 22:44:51] 2025-11-29 21:44:10,799 | INFO     | monitor loop #5626: job 0:6897531609 is in state 'finished'
[2025-11-29 22:44:51] 2025-11-29 21:44:10,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 22:44:51] 2025-11-29 21:44:11,841 | INFO     | time since job start (83296s) is within the limit (172800.0s)
[2025-11-29 22:44:51] 2025-11-29 21:44:13,305 | INFO     | monitor loop #5627: job 0:6897531609 is in state 'finished'
[2025-11-29 22:44:51] 2025-11-29 21:44:13,306 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 22:44:51] 2025-11-29 21:44:13,850 | INFO     | time since job start (83298s) is within the limit (172800.0s)
[2025-11-29 22:44:51] 2025-11-29 21:44:14,332 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-29 22:44:51] 2025-11-29 21:44:14,333 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-29 22:44:51] 2025-11-29 21:44:14,334 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6897531609/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 22:44:51] 2025-11-29 21:44:14,335 | INFO     | extracted standard info from prmon json
[2025-11-29 22:44:51] 2025-11-29 21:44:14,336 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 22:44:51] 2025-11-29 21:44:14,336 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 22:44:51] 2025-11-29 21:44:14,368 | INFO     | fitting pss+swap vs Time
[2025-11-29 22:44:51] 2025-11-29 21:44:14,370 | INFO     | sum of square deviations: 773139139279.7081
[2025-11-29 22:44:51] 2025-11-29 21:44:14,455 | INFO     | sum of deviations: 2632543108989.6
[2025-11-29 22:44:51] 2025-11-29 21:44:14,456 | INFO     | mean x: 1764411210.6061947
[2025-11-29 22:44:51] 2025-11-29 21:44:14,456 | INFO     | mean y: 2835787.690265487
[2025-11-29 22:44:51] 2025-11-29 21:44:14,456 | INFO     | intersect: -6004994288.320021
[2025-11-29 22:44:51] 2025-11-29 21:44:14,458 | INFO     | chi2: 22.575292052445196
[2025-11-29 22:44:51] 2025-11-29 21:44:14,460 | INFO     | sum of square deviations: 764618674218.5663
[2025-11-29 22:44:51] 2025-11-29 21:44:14,523 | INFO     | sum of deviations: 3081215154569.6216
[2025-11-29 22:44:51] 2025-11-29 21:44:14,523 | INFO     | mean x: 1764411058.1102886
[2025-11-29 22:44:51] 2025-11-29 21:44:14,524 | INFO     | mean y: 2843816.3582531456
[2025-11-29 22:44:51] 2025-11-29 21:44:14,524 | INFO     | intersect: -7107275612.382785
[2025-11-29 22:44:51] 2025-11-29 21:44:14,525 | INFO     | chi2: 19.287588663771405
[2025-11-29 22:44:51] 2025-11-29 21:44:14,526 | INFO     | current chi2=19.287588663771405 (change=14.563281755274964 %)
[2025-11-29 22:44:51] 2025-11-29 21:44:14,526 | INFO     | right removable region: 1350
[2025-11-29 22:44:51] 2025-11-29 21:44:14,528 | INFO     | sum of square deviations: 764617759218.5668
[2025-11-29 22:44:51] 2025-11-29 21:44:14,579 | INFO     | sum of deviations: 2076550555279.5051
[2025-11-29 22:44:51] 2025-11-29 21:44:14,580 | INFO     | mean x: 1764411363.1102886
[2025-11-29 22:44:51] 2025-11-29 21:44:14,580 | INFO     | mean y: 2845737.157660992
[2025-11-29 22:44:51] 2025-11-29 21:44:14,580 | INFO     | intersect: -4788946438.2589855
[2025-11-29 22:44:51] 2025-11-29 21:44:14,582 | INFO     | chi2: 18.142898756516843
[2025-11-29 22:44:51] 2025-11-29 21:44:14,582 | INFO     | current chi2=18.142898756516843 (change=19.63382482774245 %)
[2025-11-29 22:44:51] 2025-11-29 21:44:14,582 | INFO     | left removable region: 10
[2025-11-29 22:44:51] 2025-11-29 21:44:14,584 | INFO     | sum of square deviations: 746092684759.8959
[2025-11-29 22:44:51] 2025-11-29 21:44:14,659 | INFO     | sum of deviations: 2178691006258.4385
[2025-11-29 22:44:51] 2025-11-29 21:44:14,660 | INFO     | mean x: 1764411332.619403
[2025-11-29 22:44:51] 2025-11-29 21:44:14,660 | INFO     | mean y: 2863671.2753731343
[2025-11-29 22:44:51] 2025-11-29 21:44:14,660 | INFO     | intersect: -5149454774.1942425
[2025-11-29 22:44:51] 2025-11-29 21:44:14,662 | INFO     | chi2: 11.333268758527504
[2025-11-29 22:44:51] 2025-11-29 21:44:14,662 | INFO     | current memory leak: 2.92 B/s (using 1340 data points, chi2=11.33)
[2025-11-29 22:44:51] 2025-11-29 21:44:14,664 | INFO     | could have reported an average CPU frequency of 1999 MHz (46 samples)
[2025-11-29 22:44:51] 2025-11-29 21:44:14,664 | INFO     | ..............................
[2025-11-29 22:44:51] 2025-11-29 21:44:14,664 | INFO     | . Timing measurements:
[2025-11-29 22:44:51] 2025-11-29 21:44:14,664 | INFO     | . get job = 0 s
[2025-11-29 22:44:51] 2025-11-29 21:44:14,664 | INFO     | . initial setup = 7 s
[2025-11-29 22:44:51] 2025-11-29 21:44:14,664 | INFO     | . payload setup = 163 s
[2025-11-29 22:44:51] 2025-11-29 21:44:14,664 | INFO     | . stage-in = 0 s
[2025-11-29 22:44:51] 2025-11-29 21:44:14,664 | INFO     | . payload execution = 82836 s
[2025-11-29 22:44:51] 2025-11-29 21:44:14,664 | INFO     | . stage-out = 4 s
[2025-11-29 22:44:51] 2025-11-29 21:44:14,664 | INFO     | . log creation = 2 s
[2025-11-29 22:44:51] 2025-11-29 21:44:14,665 | INFO     | ..............................
[2025-11-29 22:44:51] 2025-11-29 21:44:14,769 | INFO     | 
[2025-11-29 22:44:51] 2025-11-29 21:44:14,769 | INFO     | job summary report
[2025-11-29 22:44:51] 2025-11-29 21:44:14,769 | INFO     | --------------------------------------------------
[2025-11-29 22:44:51] 2025-11-29 21:44:14,769 | INFO     | PanDA job id: 6897531609
[2025-11-29 22:44:51] 2025-11-29 21:44:14,769 | INFO     | task id: 47556161
[2025-11-29 22:44:51] 2025-11-29 21:44:14,769 | INFO     | errors: (none)
[2025-11-29 22:44:51] 2025-11-29 21:44:14,769 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | pilot state: finished 
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | transexitcode: 0
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | exeerrorcode: 0
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | exeerrordiag: 
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | exitcode: 0
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | exitmsg: OK
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | cpuconsumptiontime: 312503 s
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | nevents: 1000
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | neventsw: 0
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | pid: 10667
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | pgrp: 10667
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | corecount: 8
[2025-11-29 22:44:51] 2025-11-29 21:44:14,770 | INFO     | event service: False
[2025-11-29 22:44:51] 2025-11-29 21:44:14,771 | INFO     | sizes: {0: 2284038, 1: 2284122, 2: 2284321, 12: 2284321, 23: 2284349, 34: 2284377, 45: 2284533, 55: 2284561, 66: 2284589, 77: 2284617, 87: 2284673, 96: 2285243, 98
[2025-11-29 22:44:51] 2025-11-29 21:44:14,771 | INFO     | --------------------------------------------------
[2025-11-29 22:44:51] 2025-11-29 21:44:14,771 | INFO     | 
[2025-11-29 22:44:51] 2025-11-29 21:44:14,771 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-29 22:44:51] 2025-11-29 21:44:15,312 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,312 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,312 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,313 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,314 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,314 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,314 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 22:44:51] 2025-11-29 21:44:15,314 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,314 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 22:44:51] 2025-11-29 21:44:15,314 | INFO     | job 6897531609 has completed (purged errors)
[2025-11-29 22:44:51] 2025-11-29 21:44:15,314 | INFO     | overall cleanup function is called
[2025-11-29 22:44:51] 2025-11-29 21:44:16,332 | INFO     | --- collectZombieJob: --- 10, [10667]
[2025-11-29 22:44:51] 2025-11-29 21:44:16,333 | INFO     | zombie collector waiting for pid 10667
[2025-11-29 22:44:51] 2025-11-29 21:44:16,333 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 22:44:51] 2025-11-29 21:44:16,333 | INFO     | collected zombie processes
[2025-11-29 22:44:51] 2025-11-29 21:44:16,333 | INFO     | will attempt to kill all subprocesses of pid=10667
[2025-11-29 22:44:51] 2025-11-29 21:44:16,454 | INFO     | process IDs to be killed: [10667] (in reverse order)
[2025-11-29 22:44:51] 2025-11-29 21:44:17,254 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 22:44:51] 2025-11-29 21:44:17,254 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 22:44:51] 2025-11-29 21:44:17,257 | INFO     | did not find any defunct processes belonging to 10667
[2025-11-29 22:44:51] 2025-11-29 21:44:17,260 | INFO     | did not find any defunct processes belonging to 10667
[2025-11-29 22:44:51] 2025-11-29 21:44:17,328 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 22:44:51] 2025-11-29 21:44:17,328 | INFO     | ready for new job
[2025-11-29 22:44:51] 2025-11-29 21:44:17,328 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 22:44:51] 2025-11-29 21:44:17,333 | INFO     | ***************************************
[2025-11-29 22:44:51] 2025-11-29 21:44:17,333 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 22:44:51] 2025-11-29 21:44:17,333 | INFO     | ***************************************
[2025-11-29 22:44:51] 2025-11-29 21:44:17,333 | INFO     | 
[2025-11-29 22:44:51] 2025-11-29 21:44:17,334 | INFO     | pilot is running in a VM
[2025-11-29 22:44:51] 2025-11-29 21:44:17,334 | INFO     | architecture information:
[2025-11-29 22:44:51] 2025-11-29 21:44:17,336 | INFO     | executing command: cat /etc/os-release
[2025-11-29 22:44:51] 2025-11-29 21:44:17,641 | INFO     | cat /etc/os-release:
[2025-11-29 22:44:51] NAME="CentOS Linux"
[2025-11-29 22:44:51] VERSION="7 (Core)"
[2025-11-29 22:44:51] ID="centos"
[2025-11-29 22:44:51] ID_LIKE="rhel fedora"
[2025-11-29 22:44:51] VERSION_ID="7"
[2025-11-29 22:44:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 22:44:51] ANSI_COLOR="0;31"
[2025-11-29 22:44:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 22:44:51] HOME_URL="https://www.centos.org/"
[2025-11-29 22:44:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 22:44:51] 
[2025-11-29 22:44:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 22:44:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 22:44:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 22:44:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 22:44:51] 
[2025-11-29 22:44:51] 2025-11-29 21:44:17,641 | INFO     | ***************************************
[2025-11-29 22:44:51] 2025-11-29 21:44:18,145 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-29 22:44:51] 2025-11-29 21:44:18,322 | INFO     | sufficient remaining disk space (488163508224 B)
[2025-11-29 22:44:51] 2025-11-29 21:44:18,322 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 22:44:51] 2025-11-29 21:44:18,323 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 22:44:51] 2025-11-29 21:44:18,323 | INFO     | update_server=False
[2025-11-29 22:44:51] 2025-11-29 21:44:18,323 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 22:44:51] 2025-11-29 21:44:18,324 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 22:44:51] 2025-11-29 21:44:18,328 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-29 22:44:51] 2025-11-29 21:44:18,328 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-29 22:44:51] 2025-11-29 21:44:18,329 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 22:44:51] 2025-11-29 21:44:18,329 | INFO     | will abort loop
[2025-11-29 22:44:51] 2025-11-29 21:44:18,378 | INFO     | all data control threads have been joined
[2025-11-29 22:44:51] 2025-11-29 21:44:19,177 | INFO     | all job control threads have been joined
[2025-11-29 22:44:51] 2025-11-29 21:44:19,328 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 22:44:51] 2025-11-29 21:44:19,329 | INFO     | [job] retrieve thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:19,334 | INFO     | [job] job monitor thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:19,384 | INFO     | [data] control thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:19,423 | INFO     | [payload] validate_post thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:19,427 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:19,570 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:19,595 | INFO     | all payload control threads have been joined
[2025-11-29 22:44:51] 2025-11-29 21:44:19,790 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 22:44:51] 2025-11-29 21:44:19,991 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:20,183 | INFO     | [job] control thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:20,214 | INFO     | [data] copytool_in thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:20,240 | INFO     | [monitor] cgroup control has ended
[2025-11-29 22:44:51] 2025-11-29 21:44:20,504 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:20,601 | INFO     | [payload] control thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:20,734 | INFO     | [payload] failed_post thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:20,796 | INFO     | [job] queue monitor thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:20,799 | INFO     | [job] validate thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:21,335 | INFO     | [data] copytool_out thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:22,333 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 22:44:51] 2025-11-29 21:44:23,822 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140125140154176)>', '<ExcThread(monitor, started 140124708923136)>']
[2025-11-29 22:44:51] 2025-11-29 21:44:28,848 | INFO     | all workflow threads have been joined
[2025-11-29 22:44:51] 2025-11-29 21:44:28,849 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 22:44:51] 2025-11-29 21:44:28,849 | INFO     | traces error code: 0
[2025-11-29 22:44:51] 2025-11-29 21:44:28,849 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 22:44:51] 2025-11-29 21:44:47,032 | INFO     | PID=4111 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-29 22:44:51] 2025-11-29 21:44:47,032 | INFO     | .. there are 9 such processes running
[2025-11-29 22:44:51] 2025-11-29 21:44:47,032 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 22:44:51] 2025-11-29 21:44:47,032 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 22:44:51] 2025-11-29 21:44:47,032 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 22:44:51] 2025-11-29 21:44:47,033 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 22:44:51] 2025-11-29 21:44:47,033 | INFO     | [monitor] control thread has ended
[2025-11-29 22:44:51] 2025-11-29 21:44:47,309 [wrapper] ==== pilot stdout END ====
[2025-11-29 22:44:51] 2025-11-29 21:44:47,382 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 22:44:51] 2025-11-29 21:44:47,467 [wrapper] pilotpid: 4111
[2025-11-29 22:44:51] 2025-11-29 21:44:47,607 [wrapper] Pilot exit status: 0
[2025-11-29 22:44:51] 2025-11-29 21:44:47,975 [wrapper] pandaids: 6897531609
[2025-11-29 22:44:51] 2025-11-29 21:44:48,756 [wrapper] cleanup supervisor_pilot  4099 4112
[2025-11-29 22:44:51] 2025-11-29 21:44:48,808 [wrapper] Test setup, not cleaning
[2025-11-29 22:44:51] 2025-11-29 21:44:48,931 [wrapper] apfmon messages muted
[2025-11-29 22:44:51] 2025-11-29 21:44:49,017 [wrapper] ==== wrapper stdout END ====
[2025-11-29 22:44:51] 2025-11-29 21:44:49,067 [wrapper] ==== wrapper stderr END ====
[2025-11-29 22:44:51]  *** Error codes and diagnostics ***
[2025-11-29 22:44:51]     "exeErrorCode": 0,
[2025-11-29 22:44:51]     "exeErrorDiag": "",
[2025-11-29 22:44:51]     "pilotErrorCode": 0,
[2025-11-29 22:44:51]     "pilotErrorDiag": "",
[2025-11-29 22:44:51]  *** Listing of results directory ***
[2025-11-29 22:44:51] total 1331968
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-29 22:44:51] -rwx------. 1 boinc boinc     36292 Nov 25 18:01 runpilot2-wrapper.sh
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc      5112 Nov 25 18:02 queuedata.json
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc       100 Nov 28 23:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 22:44:51] -rwxr-xr-x. 1 boinc boinc      7986 Nov 28 23:32 run_atlas
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc       105 Nov 28 23:32 job.xml
[2025-11-29 22:44:51] -rw-r--r--. 2 boinc boinc 408640863 Nov 28 23:32 EVNT.47483658._002306.pool.root.1
[2025-11-29 22:44:51] -rw-r--r--. 2 boinc boinc     15847 Nov 28 23:32 start_atlas.sh
[2025-11-29 22:44:51] drwxrwx--x. 2 boinc boinc        68 Nov 28 23:32 shared
[2025-11-29 22:44:51] -rw-r--r--. 2 boinc boinc    590107 Nov 28 23:32 input.tar.gz
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc      6393 Nov 28 23:32 init_data.xml
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc         0 Nov 28 23:32 boinc_lockfile
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc      2786 Nov 28 23:32 pandaJob.out
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc    991818 Nov 28 23:35 agis_schedconf.cvmfs.json
[2025-11-29 22:44:51] drwx------. 5 boinc boinc      4096 Nov 28 23:35 pilot3
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc       533 Nov 29 22:18 boinc_task_state.xml
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc 924340796 Nov 29 22:41 HITS.47556161._002894.pool.root.1
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc      1033 Nov 29 22:42 memory_monitor_summary.json
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc   1516240 Nov 29 22:42 agis_ddmendpoints.agis.ALL.json
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc   2435709 Nov 29 22:42 log.47556161._002894.job.log.tgz.1
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc        95 Nov 29 22:44 pilot_heartbeat.json
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc      7944 Nov 29 22:44 heartbeat.json
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc      8192 Nov 29 22:44 boinc_mmap_file
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc        29 Nov 29 22:44 wrapper_checkpoint.txt
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc       819 Nov 29 22:44 pilotlog.txt
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc  11090733 Nov 29 22:44 log.47556161._002894.job.log.1
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc       353 Nov 29 22:44 output.list
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc       620 Nov 29 22:44 runtime_log
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc  13547520 Nov 29 22:44 result.tar.gz
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc      8817 Nov 29 22:44 runtime_log.err
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc       662 Nov 29 22:44 Cq5KDmKbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrbMKDmPrE8On.diag
[2025-11-29 22:44:51] -rw-r--r--. 1 boinc boinc     21430 Nov 29 22:44 stderr.txt
[2025-11-29 22:44:51] HITS file was successfully produced:
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc 924340796 Nov 29 22:41 shared/HITS.pool.root.1
[2025-11-29 22:44:51]  *** Contents of shared directory: ***
[2025-11-29 22:44:51] total 1315572
[2025-11-29 22:44:51] -rw-r--r--. 2 boinc boinc 408640863 Nov 28 23:32 ATLAS.root_0
[2025-11-29 22:44:51] -rw-r--r--. 2 boinc boinc     15847 Nov 28 23:32 start_atlas.sh
[2025-11-29 22:44:51] -rw-r--r--. 2 boinc boinc    590107 Nov 28 23:32 input.tar.gz
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc 924340796 Nov 29 22:41 HITS.pool.root.1
[2025-11-29 22:44:51] -rw-------. 1 boinc boinc  13547520 Nov 29 22:44 result.tar.gz
22:44:53 (32670): run_atlas exited; CPU time 313058.757829
22:44:53 (32670): called boinc_finish(0)

</stderr_txt>
]]>

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