Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
17:42:51 (923659): wrapper (7.7.26015): starting
17:42:51 (923659): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 17:42:51] Arguments: --nthreads 8
[2025-11-26 17:42:51] Threads: 8
[2025-11-26 17:42:51] Checking for CVMFS
[2025-11-26 17:42:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 17:42:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 17:42:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 17:42:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 17:42:51] 2.13.3.0 12763 30618 250824 153337 2 1280 28422732 40960000 50324 16776704 0 270081412 99.743 165909063 35567 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 17:42:51] CVMFS is ok
[2025-11-26 17:42:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 17:42:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 17:42:51] Further information can be found at the LHC@home message board.
[2025-11-26 17:42:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 17:42:51] Checking for apptainer binary...
[2025-11-26 17:42:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 17:42:51] Running /usr/bin/apptainer --version
[2025-11-26 17:42:51] apptainer version 1.4.4-1.el9
[2025-11-26 17:42:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 17:42:51] c7-2-17.aglt2.org
[2025-11-26 17:42:51] apptainer works
[2025-11-26 17:42:52] Set ATHENA_PROC_NUMBER=8
[2025-11-26 17:42:52] Set ATHENA_CORE_NUMBER=8
[2025-11-26 17:42:52] Starting ATLAS job with PandaID=6897531613
[2025-11-26 17:42:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:07:15]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:07:15] 2025-11-27 08:06:16,058 | INFO     | monitor loop #2042: job 0:6897531613 is in state 'finished'
[2025-11-27 03:07:15] 2025-11-27 08:06:16,058 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:07:15] 2025-11-27 08:06:17,349 | INFO     | time since job start (33787s) is within the limit (172800.0s)
[2025-11-27 03:07:15] 2025-11-27 08:06:17,921 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 03:07:15] 2025-11-27 08:06:17,934 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3317.99459375
[2025-11-27 03:07:15] 2025-11-27 08:06:17,947 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897531613/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:07:15] 2025-11-27 08:06:17,948 | INFO     | extracted standard info from prmon json
[2025-11-27 03:07:15] 2025-11-27 08:06:17,948 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:07:15] 2025-11-27 08:06:17,948 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:07:15] 2025-11-27 08:06:17,955 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:07:15] 2025-11-27 08:06:17,955 | INFO     | sum of square deviations: 52440779133.65641
[2025-11-27 03:07:15] 2025-11-27 08:06:17,961 | INFO     | sum of deviations: 847060727927.6235
[2025-11-27 03:07:15] 2025-11-27 08:06:17,961 | INFO     | mean x: 1764213864.9349005
[2025-11-27 03:07:15] 2025-11-27 08:06:17,961 | INFO     | mean y: 2970691.4339963836
[2025-11-27 03:07:15] 2025-11-27 08:06:17,961 | INFO     | intersect: -28493865269.812458
[2025-11-27 03:07:15] 2025-11-27 08:06:17,962 | INFO     | chi2: 5.530447661263241
[2025-11-27 03:07:15] 2025-11-27 08:06:17,962 | INFO     | sum of square deviations: 51031366199.246315
[2025-11-27 03:07:15] 2025-11-27 08:06:17,967 | INFO     | sum of deviations: 1023801557108.1816
[2025-11-27 03:07:15] 2025-11-27 08:06:17,968 | INFO     | mean x: 1764213712.4434307
[2025-11-27 03:07:15] 2025-11-27 08:06:17,968 | INFO     | mean y: 2989803.9251824818
[2025-11-27 03:07:15] 2025-11-27 08:06:17,968 | INFO     | intersect: -35391021377.728546
[2025-11-27 03:07:15] 2025-11-27 08:06:17,968 | INFO     | chi2: 2.6500109815817003
[2025-11-27 03:07:15] 2025-11-27 08:06:17,968 | INFO     | current chi2=2.6500109815817003 (change=52.08324635014453 %)
[2025-11-27 03:07:15] 2025-11-27 08:06:17,969 | INFO     | sum of square deviations: 49647375626.55623
[2025-11-27 03:07:15] 2025-11-27 08:06:17,974 | INFO     | sum of deviations: 1057953621657.9023
[2025-11-27 03:07:15] 2025-11-27 08:06:17,974 | INFO     | mean x: 1764213559.9484346
[2025-11-27 03:07:15] 2025-11-27 08:06:17,974 | INFO     | mean y: 2993538.710865562
[2025-11-27 03:07:15] 2025-11-27 08:06:17,974 | INFO     | intersect: -37591261979.74327
[2025-11-27 03:07:15] 2025-11-27 08:06:17,975 | INFO     | chi2: 2.2325926033029426
[2025-11-27 03:07:15] 2025-11-27 08:06:17,975 | INFO     | current chi2=2.2325926033029426 (change=15.751571641775424 %)
[2025-11-27 03:07:15] 2025-11-27 08:06:17,975 | INFO     | right removable region: 542
[2025-11-27 03:07:15] 2025-11-27 08:06:17,975 | INFO     | sum of square deviations: 51031084441.13136
[2025-11-27 03:07:15] 2025-11-27 08:06:17,981 | INFO     | sum of deviations: 702665291939.4998
[2025-11-27 03:07:15] 2025-11-27 08:06:17,981 | INFO     | mean x: 1764214017.4416058
[2025-11-27 03:07:15] 2025-11-27 08:06:17,981 | INFO     | mean y: 2986267.25
[2025-11-27 03:07:15] 2025-11-27 08:06:17,981 | INFO     | intersect: -24289108858.40633
[2025-11-27 03:07:15] 2025-11-27 08:06:17,981 | INFO     | chi2: 3.433987627526449
[2025-11-27 03:07:15] 2025-11-27 08:06:17,982 | INFO     | current chi2=3.433987627526449 (change=37.9076010143079 %)
[2025-11-27 03:07:15] 2025-11-27 08:06:17,982 | INFO     | sum of square deviations: 49646912515.451126
[2025-11-27 03:07:15] 2025-11-27 08:06:17,987 | INFO     | sum of deviations: 671101288237.5765
[2025-11-27 03:07:15] 2025-11-27 08:06:17,987 | INFO     | mean x: 1764214169.946593
[2025-11-27 03:07:15] 2025-11-27 08:06:17,987 | INFO     | mean y: 2989741.744014733
[2025-11-27 03:07:15] 2025-11-27 08:06:17,987 | INFO     | intersect: -23844745035.5127
[2025-11-27 03:07:15] 2025-11-27 08:06:17,988 | INFO     | chi2: 3.422674921110321
[2025-11-27 03:07:15] 2025-11-27 08:06:17,988 | INFO     | current chi2=3.422674921110321 (change=0.32943352286556526 %)
[2025-11-27 03:07:15] 2025-11-27 08:06:17,988 | INFO     | left removable region: 20
[2025-11-27 03:07:15] 2025-11-27 08:06:17,989 | INFO     | sum of square deviations: 44107085785.733826
[2025-11-27 03:07:15] 2025-11-27 08:06:17,993 | INFO     | sum of deviations: 837362804197.0792
[2025-11-27 03:07:15] 2025-11-27 08:06:17,994 | INFO     | mean x: 1764214139.461686
[2025-11-27 03:07:15] 2025-11-27 08:06:17,994 | INFO     | mean y: 3017628.978927203
[2025-11-27 03:07:15] 2025-11-27 08:06:17,994 | INFO     | intersect: -33490179046.95277
[2025-11-27 03:07:15] 2025-11-27 08:06:17,994 | INFO     | chi2: 0.0801506176560957
[2025-11-27 03:07:15] 2025-11-27 08:06:17,994 | INFO     | current memory leak: 18.98 B/s (using 522 data points, chi2=0.08)
[2025-11-27 03:07:15] 2025-11-27 08:06:17,995 | INFO     | could have reported an average CPU frequency of 3341 MHz (22 samples)
[2025-11-27 03:07:15] 2025-11-27 08:06:17,995 | INFO     | ..............................
[2025-11-27 03:07:15] 2025-11-27 08:06:17,995 | INFO     | . Timing measurements:
[2025-11-27 03:07:15] 2025-11-27 08:06:17,995 | INFO     | . get job = 0 s
[2025-11-27 03:07:15] 2025-11-27 08:06:17,995 | INFO     | . initial setup = 3 s
[2025-11-27 03:07:15] 2025-11-27 08:06:17,995 | INFO     | . payload setup = 11 s
[2025-11-27 03:07:15] 2025-11-27 08:06:17,995 | INFO     | . stage-in = 0 s
[2025-11-27 03:07:15] 2025-11-27 08:06:17,996 | INFO     | . payload execution = 33739 s
[2025-11-27 03:07:15] 2025-11-27 08:06:17,996 | INFO     | . stage-out = 3 s
[2025-11-27 03:07:15] 2025-11-27 08:06:17,996 | INFO     | . log creation = 0 s
[2025-11-27 03:07:15] 2025-11-27 08:06:17,996 | INFO     | ..............................
[2025-11-27 03:07:15] 2025-11-27 08:06:18,566 | INFO     | 
[2025-11-27 03:07:15] 2025-11-27 08:06:18,566 | INFO     | job summary report
[2025-11-27 03:07:15] 2025-11-27 08:06:18,566 | INFO     | --------------------------------------------------
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | PanDA job id: 6897531613
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | task id: 47556161
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | errors: (none)
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | pilot state: finished 
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | transexitcode: 0
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | exeerrorcode: 0
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | exeerrordiag: 
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | exitcode: 0
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | exitmsg: OK
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | cpuconsumptiontime: 191113 s
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | nevents: 1000
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | neventsw: 0
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | pid: 979395
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | pgrp: 979395
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | corecount: 8
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | event service: False
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | sizes: {0: 2284038, 1: 2284293, 7: 2284555, 12: 2284583, 33754: 2323846, 33755: 2323845, 33758: 2333023, 33759: 2333079, 33768: 2333325}
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | --------------------------------------------------
[2025-11-27 03:07:15] 2025-11-27 08:06:18,567 | INFO     | 
[2025-11-27 03:07:15] 2025-11-27 08:06:18,568 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 03:07:15] 2025-11-27 08:06:18,601 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,602 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,602 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,602 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,602 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,602 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,602 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,602 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,602 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,603 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,603 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,603 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,603 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,603 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,603 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,603 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,603 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,603 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:07:15] 2025-11-27 08:06:18,603 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,604 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:07:15] 2025-11-27 08:06:18,604 | INFO     | job 6897531613 has completed (purged errors)
[2025-11-27 03:07:15] 2025-11-27 08:06:18,605 | INFO     | overall cleanup function is called
[2025-11-27 03:07:15] 2025-11-27 08:06:19,623 | INFO     | --- collectZombieJob: --- 10, [979395]
[2025-11-27 03:07:15] 2025-11-27 08:06:19,623 | INFO     | zombie collector waiting for pid 979395
[2025-11-27 03:07:15] 2025-11-27 08:06:19,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:07:15] 2025-11-27 08:06:19,624 | INFO     | collected zombie processes
[2025-11-27 03:07:15] 2025-11-27 08:06:19,624 | INFO     | will attempt to kill all subprocesses of pid=979395
[2025-11-27 03:07:15] 2025-11-27 08:06:20,339 | INFO     | process IDs to be killed: [979395] (in reverse order)
[2025-11-27 03:07:15] 2025-11-27 08:06:20,603 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:07:15] 2025-11-27 08:06:20,603 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:07:15] 2025-11-27 08:06:20,639 | INFO     | did not find any defunct processes belonging to 979395
[2025-11-27 03:07:15] 2025-11-27 08:06:20,672 | INFO     | did not find any defunct processes belonging to 979395
[2025-11-27 03:07:15] 2025-11-27 08:06:20,674 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:07:15] 2025-11-27 08:06:20,674 | INFO     | ready for new job
[2025-11-27 03:07:15] 2025-11-27 08:06:20,674 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:07:15] 2025-11-27 08:06:20,676 | INFO     | ***************************************
[2025-11-27 03:07:15] 2025-11-27 08:06:20,677 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:07:15] 2025-11-27 08:06:20,677 | INFO     | ***************************************
[2025-11-27 03:07:15] 2025-11-27 08:06:20,677 | INFO     | 
[2025-11-27 03:07:15] 2025-11-27 08:06:20,681 | INFO     | architecture information:
[2025-11-27 03:07:15] 2025-11-27 08:06:20,683 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:07:15] 2025-11-27 08:06:20,718 | INFO     | cat /etc/os-release:
[2025-11-27 03:07:15] NAME="CentOS Linux"
[2025-11-27 03:07:15] VERSION="7 (Core)"
[2025-11-27 03:07:15] ID="centos"
[2025-11-27 03:07:15] ID_LIKE="rhel fedora"
[2025-11-27 03:07:15] VERSION_ID="7"
[2025-11-27 03:07:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:07:15] ANSI_COLOR="0;31"
[2025-11-27 03:07:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:07:15] HOME_URL="https://www.centos.org/"
[2025-11-27 03:07:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:07:15] 
[2025-11-27 03:07:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:07:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:07:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:07:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:07:15] 
[2025-11-27 03:07:15] 2025-11-27 08:06:20,719 | INFO     | ***************************************
[2025-11-27 03:07:15] 2025-11-27 08:06:21,222 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 03:07:15] 2025-11-27 08:06:21,249 | INFO     | sufficient remaining disk space (117218213888 B)
[2025-11-27 03:07:15] 2025-11-27 08:06:21,249 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:07:15] 2025-11-27 08:06:21,249 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:07:15] 2025-11-27 08:06:21,249 | INFO     | update_server=False
[2025-11-27 03:07:15] 2025-11-27 08:06:21,249 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:07:15] 2025-11-27 08:06:21,250 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:07:15] 2025-11-27 08:06:21,350 | INFO     | all payload control threads have been joined
[2025-11-27 03:07:15] 2025-11-27 08:06:21,971 | INFO     | all job control threads have been joined
[2025-11-27 03:07:15] 2025-11-27 08:06:22,085 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:07:15] 2025-11-27 08:06:22,085 | INFO     | aborting loop
[2025-11-27 03:07:15] 2025-11-27 08:06:22,252 | INFO     | all data control threads have been joined
[2025-11-27 03:07:15] 2025-11-27 08:06:22,255 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:22,357 | INFO     | [payload] control thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:22,636 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:22,875 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:22,959 | INFO     | [job] validate thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:22,977 | INFO     | [job] control thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:23,037 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:23,090 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:23,091 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:23,091 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:07:15] 2025-11-27 08:06:23,177 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:23,256 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:23,257 | INFO     | [data] control thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:23,340 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:23,757 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:24,076 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:07:15] 2025-11-27 08:06:24,096 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:28,095 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:07:15] 2025-11-27 08:06:51,354 | INFO     | PID=941982 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 03:07:15] 2025-11-27 08:06:51,354 | INFO     | .. there are 73 such processes running
[2025-11-27 03:07:15] 2025-11-27 08:06:51,355 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:07:15] 2025-11-27 08:06:51,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:07:15] 2025-11-27 08:06:51,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:07:15] 2025-11-27 08:07:08,402 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:07:15] 2025-11-27 08:07:09,414 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796816721728)>', '<ExcThread(monitor, started 139795799987968)>']
[2025-11-27 03:07:15] 2025-11-27 08:07:09,471 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:07:15] 2025-11-27 08:07:09,472 | INFO     | [monitor] control thread has ended
[2025-11-27 03:07:15] 2025-11-27 08:07:14,446 | INFO     | all workflow threads have been joined
[2025-11-27 03:07:15] 2025-11-27 08:07:14,446 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:07:15] 2025-11-27 08:07:14,450 | INFO     | traces error code: 0
[2025-11-27 03:07:15] 2025-11-27 08:07:14,450 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:07:15] 2025-11-27 08:07:14,660 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:07:15] 2025-11-27 08:07:14,667 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:07:15] 2025-11-27 08:07:14,670 [wrapper] pilotpid: 941982
[2025-11-27 03:07:15] 2025-11-27 08:07:14,673 [wrapper] Pilot exit status: 0
[2025-11-27 03:07:15] 2025-11-27 08:07:14,749 [wrapper] pandaids: 6897531613
[2025-11-27 03:07:15] 2025-11-27 08:07:14,949 [wrapper] cleanup supervisor_pilot 2881033 941984
[2025-11-27 03:07:15] 2025-11-27 08:07:14,957 [wrapper] Test setup, not cleaning
[2025-11-27 03:07:15] 2025-11-27 08:07:14,960 [wrapper] apfmon messages muted
[2025-11-27 03:07:15] 2025-11-27 08:07:14,963 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:07:15] 2025-11-27 08:07:14,967 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:07:15]  *** Error codes and diagnostics ***
[2025-11-27 03:07:15]     "exeErrorCode": 0,
[2025-11-27 03:07:15]     "exeErrorDiag": "",
[2025-11-27 03:07:15]     "pilotErrorCode": 0,
[2025-11-27 03:07:15]     "pilotErrorDiag": "",
[2025-11-27 03:07:15]  *** Listing of results directory ***
[2025-11-27 03:07:15] total 1321548
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 03:07:15] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas       100 Nov 26 17:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:07:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 17:42 run_atlas
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas       105 Nov 26 17:42 job.xml
[2025-11-27 03:07:15] -rw-r--r--. 2 boincer umatlas 408640863 Nov 26 17:42 EVNT.47483658._002306.pool.root.1
[2025-11-27 03:07:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:42 start_atlas.sh
[2025-11-27 03:07:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 17:42 shared
[2025-11-27 03:07:15] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 17:42 input.tar.gz
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas         0 Nov 26 17:42 boinc_lockfile
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 17:42 pandaJob.out
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas        57 Nov 26 17:42 setup.sh.local
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas    991546 Nov 26 17:43 agis_schedconf.cvmfs.json
[2025-11-27 03:07:15] drwx------. 5 boincer umatlas      4096 Nov 26 17:43 pilot3
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas       532 Nov 27 02:57 boinc_task_state.xml
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas      6945 Nov 27 03:03 init_data.xml
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas 928539121 Nov 27 03:05 HITS.47556161._002898.pool.root.1
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas      1074 Nov 27 03:06 memory_monitor_summary.json
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:06 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas   1799451 Nov 27 03:06 log.47556161._002898.job.log.tgz.1
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas      7965 Nov 27 03:06 heartbeat.json
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas        95 Nov 27 03:06 pilot_heartbeat.json
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas      4824 Nov 27 03:07 pilotlog.txt
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:07 boinc_mmap_file
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas   4282830 Nov 27 03:07 log.47556161._002898.job.log.1
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas       353 Nov 27 03:07 output.list
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:07 wrapper_checkpoint.txt
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:07 runtime_log
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas   6103040 Nov 27 03:07 result.tar.gz
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas       664 Nov 27 03:07 svALDmKbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvbMKDmmGc9om.diag
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 03:07 runtime_log.err
[2025-11-27 03:07:15] -rw-r--r--. 1 boincer umatlas     21335 Nov 27 03:07 stderr.txt
[2025-11-27 03:07:15] HITS file was successfully produced:
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas 928539121 Nov 27 03:05 shared/HITS.pool.root.1
[2025-11-27 03:07:15]  *** Contents of shared directory: ***
[2025-11-27 03:07:15] total 1312408
[2025-11-27 03:07:15] -rw-r--r--. 2 boincer umatlas 408640863 Nov 26 17:42 ATLAS.root_0
[2025-11-27 03:07:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 17:42 start_atlas.sh
[2025-11-27 03:07:15] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 17:42 input.tar.gz
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas 928539121 Nov 27 03:05 HITS.pool.root.1
[2025-11-27 03:07:15] -rw-------. 1 boincer umatlas   6103040 Nov 27 03:07 result.tar.gz
03:07:17 (923659): run_atlas exited; CPU time 192269.700206
03:07:17 (923659): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN