Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:55:49 (1191522): wrapper (7.7.26015): starting
18:55:49 (1191522): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 18:55:49] Arguments: --nthreads 9
[2025-11-26 18:55:49] Threads: 9
[2025-11-26 18:55:49] Checking for CVMFS
[2025-11-26 18:55:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:55:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:55:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:55:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:55:49] 2.13.3.0 9702 30739 335492 153340 3 545 28123558 32935937 26804 16776704 0 159342447 99.696 114758582 32294 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 18:55:49] CVMFS is ok
[2025-11-26 18:55:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:55:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:55:49] Further information can be found at the LHC@home message board.
[2025-11-26 18:55:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:55:49] Checking for apptainer binary...
[2025-11-26 18:55:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:55:49] Running /usr/bin/apptainer --version
[2025-11-26 18:55:50] apptainer version 1.4.4-1.el9
[2025-11-26 18:55:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:55:50] c-4-37.aglt2.org
[2025-11-26 18:55:50] apptainer works
[2025-11-26 18:55:50] Set ATHENA_PROC_NUMBER=9
[2025-11-26 18:55:50] Set ATHENA_CORE_NUMBER=9
[2025-11-26 18:55:50] Starting ATLAS job with PandaID=6897507576
[2025-11-26 18:55:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 20:03:15]  *** The last 200 lines of the pilot log: ***
[2025-11-27 20:03:15] 2025-11-28 01:02:29,722 | INFO     | monitor loop #5754: job 0:6897507576 is in state 'finished'
[2025-11-27 20:03:15] 2025-11-28 01:02:29,722 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:03:15] 2025-11-28 01:02:31,640 | INFO     | time since job start (90386s) is within the limit (172800.0s)
[2025-11-27 20:03:15] 2025-11-28 01:02:32,227 | INFO     | monitor loop #5755: job 0:6897507576 is in state 'finished'
[2025-11-27 20:03:15] 2025-11-28 01:02:32,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:03:15] 2025-11-28 01:02:33,649 | INFO     | time since job start (90388s) is within the limit (172800.0s)
[2025-11-27 20:03:15] 2025-11-28 01:02:34,753 | INFO     | monitor loop #5756: job 0:6897507576 is in state 'finished'
[2025-11-27 20:03:15] 2025-11-28 01:02:34,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:03:15] 2025-11-28 01:02:35,658 | INFO     | time since job start (90390s) is within the limit (172800.0s)
[2025-11-27 20:03:15] 2025-11-28 01:02:37,264 | INFO     | monitor loop #5757: job 0:6897507576 is in state 'finished'
[2025-11-27 20:03:15] 2025-11-28 01:02:37,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:03:15] 2025-11-28 01:02:37,682 | INFO     | time since job start (90392s) is within the limit (172800.0s)
[2025-11-27 20:03:15] 2025-11-28 01:02:39,169 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 20:03:15] 2025-11-28 01:02:39,205 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8400500000002
[2025-11-27 20:03:15] 2025-11-28 01:02:39,363 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6897507576/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 20:03:15] 2025-11-28 01:02:39,364 | INFO     | extracted standard info from prmon json
[2025-11-27 20:03:15] 2025-11-28 01:02:39,364 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 20:03:15] 2025-11-28 01:02:39,365 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 20:03:15] 2025-11-28 01:02:39,667 | INFO     | fitting pss+swap vs Time
[2025-11-27 20:03:15] 2025-11-28 01:02:39,725 | INFO     | sum of square deviations: 1007246712854.0039
[2025-11-27 20:03:15] 2025-11-28 01:02:39,871 | INFO     | monitor loop #5758: job 0:6897507576 is in state 'finished'
[2025-11-27 20:03:15] 2025-11-28 01:02:39,871 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 20:03:15] 2025-11-28 01:02:39,878 | INFO     | time since job start (90394s) is within the limit (172800.0s)
[2025-11-27 20:03:15] 2025-11-28 01:02:40,232 | INFO     | sum of deviations: 3579013158472.4023
[2025-11-27 20:03:15] 2025-11-28 01:02:40,233 | INFO     | mean x: 1764246540.7873058
[2025-11-27 20:03:15] 2025-11-28 01:02:40,233 | INFO     | mean y: 3098272.8298446997
[2025-11-27 20:03:15] 2025-11-28 01:02:40,233 | INFO     | intersect: -6265734877.666037
[2025-11-27 20:03:15] 2025-11-28 01:02:40,236 | INFO     | chi2: 15.553619904526633
[2025-11-27 20:03:15] 2025-11-28 01:02:40,243 | INFO     | sum of square deviations: 997080055117.9753
[2025-11-27 20:03:15] 2025-11-28 01:02:40,371 | INFO     | sum of deviations: 4139983605513.806
[2025-11-27 20:03:15] 2025-11-28 01:02:40,371 | INFO     | mean x: 1764246388.2933605
[2025-11-27 20:03:15] 2025-11-28 01:02:40,371 | INFO     | mean y: 3106685.1321138213
[2025-11-27 20:03:15] 2025-11-28 01:02:40,371 | INFO     | intersect: -7322234029.618466
[2025-11-27 20:03:15] 2025-11-28 01:02:40,373 | INFO     | chi2: 11.957891042998696
[2025-11-27 20:03:15] 2025-11-28 01:02:40,373 | INFO     | current chi2=11.957891042998696 (change=23.118276540122064 %)
[2025-11-27 20:03:15] 2025-11-28 01:02:40,374 | INFO     | right removable region: 1475
[2025-11-27 20:03:15] 2025-11-28 01:02:40,380 | INFO     | sum of square deviations: 997078530547.5616
[2025-11-27 20:03:15] 2025-11-28 01:02:40,496 | INFO     | sum of deviations: 3138523872338.974
[2025-11-27 20:03:15] 2025-11-28 01:02:40,496 | INFO     | mean x: 1764246693.292683
[2025-11-27 20:03:15] 2025-11-28 01:02:40,496 | INFO     | mean y: 3104873.877371274
[2025-11-27 20:03:15] 2025-11-28 01:02:40,496 | INFO     | intersect: -5550249444.717151
[2025-11-27 20:03:15] 2025-11-28 01:02:40,502 | INFO     | chi2: 13.336250212760905
[2025-11-27 20:03:15] 2025-11-28 01:02:40,503 | INFO     | current chi2=13.336250212760905 (change=14.25629342478915 %)
[2025-11-27 20:03:15] 2025-11-28 01:02:40,503 | INFO     | left removable region: 10
[2025-11-27 20:03:15] 2025-11-28 01:02:40,505 | INFO     | sum of square deviations: 974951777567.3832
[2025-11-27 20:03:15] 2025-11-28 01:02:40,610 | INFO     | sum of deviations: 3689763172471.5024
[2025-11-27 20:03:15] 2025-11-28 01:02:40,610 | INFO     | mean x: 1764246662.803413
[2025-11-27 20:03:15] 2025-11-28 01:02:40,611 | INFO     | mean y: 3116484.901023891
[2025-11-27 20:03:15] 2025-11-28 01:02:40,611 | INFO     | intersect: -6673780273.839304
[2025-11-27 20:03:15] 2025-11-28 01:02:40,617 | INFO     | chi2: 9.119068472746918
[2025-11-27 20:03:15] 2025-11-28 01:02:40,617 | INFO     | current memory leak: 3.78 B/s (using 1465 data points, chi2=9.12)
[2025-11-27 20:03:15] 2025-11-28 01:02:40,618 | INFO     | could have reported an average CPU frequency of 2599 MHz (53 samples)
[2025-11-27 20:03:15] 2025-11-28 01:02:40,618 | INFO     | ..............................
[2025-11-27 20:03:15] 2025-11-28 01:02:40,619 | INFO     | . Timing measurements:
[2025-11-27 20:03:15] 2025-11-28 01:02:40,619 | INFO     | . get job = 0 s
[2025-11-27 20:03:15] 2025-11-28 01:02:40,619 | INFO     | . initial setup = 2 s
[2025-11-27 20:03:15] 2025-11-28 01:02:40,619 | INFO     | . payload setup = 8 s
[2025-11-27 20:03:15] 2025-11-28 01:02:40,619 | INFO     | . stage-in = 0 s
[2025-11-27 20:03:15] 2025-11-28 01:02:40,619 | INFO     | . payload execution = 90316 s
[2025-11-27 20:03:15] 2025-11-28 01:02:40,619 | INFO     | . stage-out = 11 s
[2025-11-27 20:03:15] 2025-11-28 01:02:40,619 | INFO     | . log creation = 3 s
[2025-11-27 20:03:15] 2025-11-28 01:02:40,619 | INFO     | ..............................
[2025-11-27 20:03:15] 2025-11-28 01:02:40,779 | INFO     | 
[2025-11-27 20:03:15] 2025-11-28 01:02:40,780 | INFO     | job summary report
[2025-11-27 20:03:15] 2025-11-28 01:02:40,780 | INFO     | --------------------------------------------------
[2025-11-27 20:03:15] 2025-11-28 01:02:40,780 | INFO     | PanDA job id: 6897507576
[2025-11-27 20:03:15] 2025-11-28 01:02:40,780 | INFO     | task id: 47556161
[2025-11-27 20:03:15] 2025-11-28 01:02:40,780 | INFO     | errors: (none)
[2025-11-27 20:03:15] 2025-11-28 01:02:40,780 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 20:03:15] 2025-11-28 01:02:40,780 | INFO     | pilot state: finished 
[2025-11-27 20:03:15] 2025-11-28 01:02:40,780 | INFO     | transexitcode: 0
[2025-11-27 20:03:15] 2025-11-28 01:02:40,780 | INFO     | exeerrorcode: 0
[2025-11-27 20:03:15] 2025-11-28 01:02:40,781 | INFO     | exeerrordiag: 
[2025-11-27 20:03:15] 2025-11-28 01:02:40,781 | INFO     | exitcode: 0
[2025-11-27 20:03:15] 2025-11-28 01:02:40,783 | INFO     | exitmsg: OK
[2025-11-27 20:03:15] 2025-11-28 01:02:40,783 | INFO     | cpuconsumptiontime: 299527 s
[2025-11-27 20:03:15] 2025-11-28 01:02:40,783 | INFO     | nevents: 1000
[2025-11-27 20:03:15] 2025-11-28 01:02:40,783 | INFO     | neventsw: 0
[2025-11-27 20:03:15] 2025-11-28 01:02:40,783 | INFO     | pid: 1202610
[2025-11-27 20:03:15] 2025-11-28 01:02:40,783 | INFO     | pgrp: 1202610
[2025-11-27 20:03:15] 2025-11-28 01:02:40,783 | INFO     | corecount: 9
[2025-11-27 20:03:15] 2025-11-28 01:02:40,784 | INFO     | event service: False
[2025-11-27 20:03:15] 2025-11-28 01:02:40,784 | INFO     | sizes: {0: 2284265, 6: 2284527, 11: 2284555, 90330: 2352771, 90342: 2361765, 90344: 2361821, 90378: 2362291}
[2025-11-27 20:03:15] 2025-11-28 01:02:40,784 | INFO     | --------------------------------------------------
[2025-11-27 20:03:15] 2025-11-28 01:02:40,784 | INFO     | 
[2025-11-27 20:03:15] 2025-11-28 01:02:40,784 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 20:03:15] 2025-11-28 01:02:40,924 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,924 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,924 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,925 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,925 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,925 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,925 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,925 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,925 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,925 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,925 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,926 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,926 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 20:03:15] 2025-11-28 01:02:40,926 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,926 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 20:03:15] 2025-11-28 01:02:40,926 | INFO     | job 6897507576 has completed (purged errors)
[2025-11-27 20:03:15] 2025-11-28 01:02:40,927 | INFO     | overall cleanup function is called
[2025-11-27 20:03:15] 2025-11-28 01:02:41,957 | INFO     | --- collectZombieJob: --- 10, [1202610]
[2025-11-27 20:03:15] 2025-11-28 01:02:41,958 | INFO     | zombie collector waiting for pid 1202610
[2025-11-27 20:03:15] 2025-11-28 01:02:41,958 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 20:03:15] 2025-11-28 01:02:41,958 | INFO     | collected zombie processes
[2025-11-27 20:03:15] 2025-11-28 01:02:41,958 | INFO     | will attempt to kill all subprocesses of pid=1202610
[2025-11-27 20:03:15] 2025-11-28 01:02:42,960 | INFO     | process IDs to be killed: [1202610] (in reverse order)
[2025-11-27 20:03:15] 2025-11-28 01:02:43,480 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 20:03:15] 2025-11-28 01:02:43,480 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 20:03:15] 2025-11-28 01:02:43,775 | INFO     | did not find any defunct processes belonging to 1202610
[2025-11-27 20:03:15] 2025-11-28 01:02:43,939 | INFO     | did not find any defunct processes belonging to 1202610
[2025-11-27 20:03:15] 2025-11-28 01:02:43,944 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 20:03:15] 2025-11-28 01:02:43,944 | INFO     | ready for new job
[2025-11-27 20:03:15] 2025-11-28 01:02:43,944 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 20:03:15] 2025-11-28 01:02:43,954 | INFO     | ***************************************
[2025-11-27 20:03:15] 2025-11-28 01:02:43,955 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 20:03:15] 2025-11-28 01:02:43,955 | INFO     | ***************************************
[2025-11-27 20:03:15] 2025-11-28 01:02:43,955 | INFO     | 
[2025-11-27 20:03:15] 2025-11-28 01:02:43,957 | INFO     | architecture information:
[2025-11-27 20:03:15] 2025-11-28 01:02:43,961 | INFO     | executing command: cat /etc/os-release
[2025-11-27 20:03:15] 2025-11-28 01:02:44,017 | INFO     | cat /etc/os-release:
[2025-11-27 20:03:15] NAME="CentOS Linux"
[2025-11-27 20:03:15] VERSION="7 (Core)"
[2025-11-27 20:03:15] ID="centos"
[2025-11-27 20:03:15] ID_LIKE="rhel fedora"
[2025-11-27 20:03:15] VERSION_ID="7"
[2025-11-27 20:03:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 20:03:15] ANSI_COLOR="0;31"
[2025-11-27 20:03:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 20:03:15] HOME_URL="https://www.centos.org/"
[2025-11-27 20:03:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 20:03:15] 
[2025-11-27 20:03:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 20:03:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 20:03:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 20:03:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 20:03:15] 
[2025-11-27 20:03:15] 2025-11-28 01:02:44,018 | INFO     | ***************************************
[2025-11-27 20:03:15] 2025-11-28 01:02:44,528 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 20:03:15] 2025-11-28 01:02:44,597 | INFO     | sufficient remaining disk space (72998715392 B)
[2025-11-27 20:03:15] 2025-11-28 01:02:44,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 20:03:15] 2025-11-28 01:02:44,597 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 20:03:15] 2025-11-28 01:02:44,597 | INFO     | update_server=False
[2025-11-27 20:03:15] 2025-11-28 01:02:44,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 20:03:15] 2025-11-28 01:02:44,672 | INFO     | all payload control threads have been joined
[2025-11-27 20:03:15] 2025-11-28 01:02:44,965 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 20:03:15] 2025-11-28 01:02:44,965 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 20:03:15] 2025-11-28 01:02:44,965 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:03:15] 2025-11-28 01:02:44,965 | INFO     | will abort loop
[2025-11-27 20:03:15] 2025-11-28 01:02:45,130 | INFO     | all data control threads have been joined
[2025-11-27 20:03:15] 2025-11-28 01:02:45,273 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 20:03:15] 2025-11-28 01:02:45,534 | INFO     | all job control threads have been joined
[2025-11-27 20:03:15] 2025-11-28 01:02:45,595 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 20:03:15] 2025-11-28 01:02:45,603 | INFO     | [job] retrieve thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:45,678 | INFO     | [payload] control thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:45,798 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 20:03:15] 2025-11-28 01:02:45,973 | INFO     | [job] job monitor thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:46,136 | INFO     | [data] control thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:46,206 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:46,257 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:46,335 | INFO     | [payload] failed_post thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:46,540 | INFO     | [job] control thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:46,720 | INFO     | [payload] validate_post thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:46,733 | INFO     | [monitor] cgroup control has ended
[2025-11-27 20:03:15] 2025-11-28 01:02:46,820 | INFO     | [job] queue monitor thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:46,885 | INFO     | [data] copytool_in thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:46,984 | INFO     | [job] validate thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:47,007 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:47,007 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:47,607 | INFO     | [data] copytool_out thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:49,291 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 20:03:15] 2025-11-28 01:02:49,724 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140413556537152)>', '<ExcThread(monitor, started 140413050533632)>']
[2025-11-27 20:03:15] 2025-11-28 01:02:54,750 | INFO     | all workflow threads have been joined
[2025-11-27 20:03:15] 2025-11-28 01:02:54,750 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 20:03:15] 2025-11-28 01:02:54,750 | INFO     | traces error code: 0
[2025-11-27 20:03:15] 2025-11-28 01:02:54,751 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 20:03:15] 2025-11-28 01:03:13,831 | INFO     | PID=1195366 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 20:03:15] 2025-11-28 01:03:13,832 | INFO     | .. there are 43 such processes running
[2025-11-27 20:03:15] 2025-11-28 01:03:13,833 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 20:03:15] 2025-11-28 01:03:13,833 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 20:03:15] 2025-11-28 01:03:13,833 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 20:03:15] 2025-11-28 01:03:13,833 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 20:03:15] 2025-11-28 01:03:13,833 | INFO     | [monitor] control thread has ended
[2025-11-27 20:03:15] 2025-11-28 01:03:14,104 [wrapper] ==== pilot stdout END ====
[2025-11-27 20:03:15] 2025-11-28 01:03:14,148 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 20:03:15] 2025-11-28 01:03:14,160 [wrapper] pilotpid: 1195366
[2025-11-27 20:03:15] 2025-11-28 01:03:14,163 [wrapper] Pilot exit status: 0
[2025-11-27 20:03:15] 2025-11-28 01:03:14,245 [wrapper] pandaids: 6897507576
[2025-11-27 20:03:15] 2025-11-28 01:03:14,409 [wrapper] cleanup supervisor_pilot 2325794 1195367
[2025-11-27 20:03:15] 2025-11-28 01:03:14,425 [wrapper] Test setup, not cleaning
[2025-11-27 20:03:15] 2025-11-28 01:03:14,441 [wrapper] apfmon messages muted
[2025-11-27 20:03:15] 2025-11-28 01:03:14,477 [wrapper] ==== wrapper stdout END ====
[2025-11-27 20:03:15] 2025-11-28 01:03:14,490 [wrapper] ==== wrapper stderr END ====
[2025-11-27 20:03:15]  *** Error codes and diagnostics ***
[2025-11-27 20:03:15]     "exeErrorCode": 0,
[2025-11-27 20:03:15]     "exeErrorDiag": "",
[2025-11-27 20:03:15]     "pilotErrorCode": 0,
[2025-11-27 20:03:15]     "pilotErrorDiag": "",
[2025-11-27 20:03:15]  *** Listing of results directory ***
[2025-11-27 20:03:15] total 1318544
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 20:03:15] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas       100 Nov 26 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 20:03:15] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 18:55 run_atlas
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas       105 Nov 26 18:55 job.xml
[2025-11-27 20:03:15] -rw-r--r--. 2 boincer umatlas 410696960 Nov 26 18:55 EVNT.47483658._002277.pool.root.1
[2025-11-27 20:03:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:55 start_atlas.sh
[2025-11-27 20:03:15] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 18:55 shared
[2025-11-27 20:03:15] -rw-r--r--. 2 boincer umatlas    590111 Nov 26 18:55 input.tar.gz
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas         0 Nov 26 18:55 boinc_lockfile
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 18:55 pandaJob.out
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas        57 Nov 26 18:55 setup.sh.local
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas    991538 Nov 26 18:56 agis_schedconf.cvmfs.json
[2025-11-27 20:03:15] drwx------. 5 boincer umatlas      4096 Nov 26 18:56 pilot3
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas       533 Nov 27 19:36 boinc_task_state.xml
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas      6662 Nov 27 19:58 init_data.xml
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas 906709517 Nov 27 20:00 HITS.47556161._002604.pool.root.1
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas      1058 Nov 27 20:01 memory_monitor_summary.json
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas   1516240 Nov 27 20:01 agis_ddmendpoints.agis.ALL.json
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas   2631103 Nov 27 20:02 log.47556161._002604.job.log.tgz.1
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas        95 Nov 27 20:02 pilot_heartbeat.json
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas      8616 Nov 27 20:02 heartbeat.json
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas        29 Nov 27 20:03 wrapper_checkpoint.txt
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 20:03 boinc_mmap_file
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas       823 Nov 27 20:03 pilotlog.txt
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas  11801330 Nov 27 20:03 log.47556161._002604.job.log.1
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas       353 Nov 27 20:03 output.list
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas       620 Nov 27 20:03 runtime_log
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas  14448640 Nov 27 20:03 result.tar.gz
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas      9333 Nov 27 20:03 runtime_log.err
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas       658 Nov 27 20:03 3YzNDm5aBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmkfJKDmQq0q1m.diag
[2025-11-27 20:03:15] -rw-r--r--. 1 boincer umatlas     21748 Nov 27 20:03 stderr.txt
[2025-11-27 20:03:15] HITS file was successfully produced:
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas 906709517 Nov 27 20:00 shared/HITS.pool.root.1
[2025-11-27 20:03:15]  *** Contents of shared directory: ***
[2025-11-27 20:03:15] total 1301248
[2025-11-27 20:03:15] -rw-r--r--. 2 boincer umatlas 410696960 Nov 26 18:55 ATLAS.root_0
[2025-11-27 20:03:15] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 18:55 start_atlas.sh
[2025-11-27 20:03:15] -rw-r--r--. 2 boincer umatlas    590111 Nov 26 18:55 input.tar.gz
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas 906709517 Nov 27 20:00 HITS.pool.root.1
[2025-11-27 20:03:15] -rw-------. 1 boincer umatlas  14448640 Nov 27 20:03 result.tar.gz
20:03:17 (1191522): run_atlas exited; CPU time 302256.213579
20:03:17 (1191522): called boinc_finish(0)

</stderr_txt>
]]>

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