Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:00:27 (2610065): wrapper (7.7.26015): starting
04:00:27 (2610065): wrapper: running run_atlas (--nthreads 12)
[2025-11-27 04:00:27] Arguments: --nthreads 12
[2025-11-27 04:00:27] Threads: 12
[2025-11-27 04:00:27] Checking for CVMFS
[2025-11-27 04:00:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:00:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:00:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:00:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:00:27] 2.13.3.0 18690 7928 91240 153343 0 81 2065849 4097024 1043 130560 0 6055131 99.990 278364 4984 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-27 04:00:27] CVMFS is ok
[2025-11-27 04:00:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 04:00:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 04:00:27] Further information can be found at the LHC@home message board.
[2025-11-27 04:00:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:00:27] Checking for apptainer binary...
[2025-11-27 04:00:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 04:00:27] Running /usr/bin/apptainer --version
[2025-11-27 04:00:27] apptainer version 1.4.4-1.el9
[2025-11-27 04:00:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:00:28] pckelar8.cern.ch
[2025-11-27 04:00:28] apptainer works
[2025-11-27 04:00:28] Set ATHENA_PROC_NUMBER=12
[2025-11-27 04:00:28] Set ATHENA_CORE_NUMBER=12
[2025-11-27 04:00:28] Starting ATLAS job with PandaID=6895417900
[2025-11-27 04:00:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 16:01:57]  *** The last 200 lines of the pilot log: ***
[2025-11-27 16:01:57] 2025-11-27 15:01:00,750 | INFO     | PID=2613901 has CPU usage=17.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 16:01:57] 2025-11-27 15:01:00,751 | INFO     | .. there are 2 such processes running
[2025-11-27 16:01:57] 2025-11-27 15:01:00,950 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 16:01:57] 2025-11-27 15:01:00,958 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2832.875708333333
[2025-11-27 16:01:57] 2025-11-27 15:01:00,965 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6895417900/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 16:01:57] 2025-11-27 15:01:00,966 | INFO     | extracted standard info from prmon json
[2025-11-27 16:01:57] 2025-11-27 15:01:00,966 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 16:01:57] 2025-11-27 15:01:00,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 16:01:57] 2025-11-27 15:01:00,987 | INFO     | fitting pss+swap vs Time
[2025-11-27 16:01:57] 2025-11-27 15:01:00,989 | INFO     | sum of square deviations: 110046607944.79645
[2025-11-27 16:01:57] 2025-11-27 15:01:01,005 | INFO     | sum of deviations: 1487929508662.9478
[2025-11-27 16:01:57] 2025-11-27 15:01:01,005 | INFO     | mean x: 1764234034.4830508
[2025-11-27 16:01:57] 2025-11-27 15:01:01,006 | INFO     | mean y: 3571779.745762712
[2025-11-27 16:01:57] 2025-11-27 15:01:01,006 | INFO     | intersect: -23850465424.305485
[2025-11-27 16:01:57] 2025-11-27 15:01:01,007 | INFO     | chi2: 5.2881449079580145
[2025-11-27 16:01:57] 2025-11-27 15:01:01,008 | INFO     | sum of square deviations: 107731744254.92969
[2025-11-27 16:01:57] 2025-11-27 15:01:01,025 | INFO     | sum of deviations: 1724655152369.7256
[2025-11-27 16:01:57] 2025-11-27 15:01:01,025 | INFO     | mean x: 1764233881.9900427
[2025-11-27 16:01:57] 2025-11-27 15:01:01,025 | INFO     | mean y: 3587358.1038406827
[2025-11-27 16:01:57] 2025-11-27 15:01:01,025 | INFO     | intersect: -28239666991.879818
[2025-11-27 16:01:57] 2025-11-27 15:01:01,026 | INFO     | chi2: 3.0273537285561023
[2025-11-27 16:01:57] 2025-11-27 15:01:01,027 | INFO     | current chi2=3.0273537285561023 (change=42.75206558730448 %)
[2025-11-27 16:01:57] 2025-11-27 15:01:01,028 | INFO     | sum of square deviations: 105449493454.4768
[2025-11-27 16:01:57] 2025-11-27 15:01:01,044 | INFO     | sum of deviations: 1763644751210.569
[2025-11-27 16:01:57] 2025-11-27 15:01:01,044 | INFO     | mean x: 1764233729.4942694
[2025-11-27 16:01:57] 2025-11-27 15:01:01,044 | INFO     | mean y: 3589949.641833811
[2025-11-27 16:01:57] 2025-11-27 15:01:01,044 | INFO     | intersect: -29503252188.717617
[2025-11-27 16:01:57] 2025-11-27 15:01:01,045 | INFO     | chi2: 2.79180066142621
[2025-11-27 16:01:57] 2025-11-27 15:01:01,046 | INFO     | current chi2=2.79180066142621 (change=7.780824054618796 %)
[2025-11-27 16:01:57] 2025-11-27 15:01:01,046 | INFO     | right removable region: 697
[2025-11-27 16:01:57] 2025-11-27 15:01:01,047 | INFO     | sum of square deviations: 107731362639.90878
[2025-11-27 16:01:57] 2025-11-27 15:01:01,063 | INFO     | sum of deviations: 1234076495543.0098
[2025-11-27 16:01:57] 2025-11-27 15:01:01,063 | INFO     | mean x: 1764234186.9886203
[2025-11-27 16:01:57] 2025-11-27 15:01:01,063 | INFO     | mean y: 3588474.8762446656
[2025-11-27 16:01:57] 2025-11-27 15:01:01,063 | INFO     | intersect: -20205939089.286858
[2025-11-27 16:01:57] 2025-11-27 15:01:01,065 | INFO     | chi2: 2.901861592414627
[2025-11-27 16:01:57] 2025-11-27 15:01:01,065 | INFO     | current chi2=2.901861592414627 (change=45.12514987916313 %)
[2025-11-27 16:01:57] 2025-11-27 15:01:01,066 | INFO     | sum of square deviations: 105448987402.40735
[2025-11-27 16:01:57] 2025-11-27 15:01:01,082 | INFO     | sum of deviations: 1156403796273.5022
[2025-11-27 16:01:57] 2025-11-27 15:01:01,083 | INFO     | mean x: 1764234339.4885387
[2025-11-27 16:01:57] 2025-11-27 15:01:01,083 | INFO     | mean y: 3593664.875358166
[2025-11-27 16:01:57] 2025-11-27 15:01:01,083 | INFO     | intersect: -19343839989.608883
[2025-11-27 16:01:57] 2025-11-27 15:01:01,084 | INFO     | chi2: 2.807023698938183
[2025-11-27 16:01:57] 2025-11-27 15:01:01,084 | INFO     | current chi2=2.807023698938183 (change=3.2681742549109583 %)
[2025-11-27 16:01:57] 2025-11-27 15:01:01,085 | INFO     | left removable region: 20
[2025-11-27 16:01:57] 2025-11-27 15:01:01,086 | INFO     | sum of square deviations: 96215154698.0
[2025-11-27 16:01:57] 2025-11-27 15:01:01,101 | INFO     | sum of deviations: 1304647081818.9998
[2025-11-27 16:01:57] 2025-11-27 15:01:01,101 | INFO     | mean x: 1764234309.0
[2025-11-27 16:01:57] 2025-11-27 15:01:01,102 | INFO     | mean y: 3620853.9261447564
[2025-11-27 16:01:57] 2025-11-27 15:01:01,102 | INFO     | intersect: -23918838659.92479
[2025-11-27 16:01:57] 2025-11-27 15:01:01,103 | INFO     | chi2: 0.21281544885652662
[2025-11-27 16:01:57] 2025-11-27 15:01:01,103 | INFO     | current memory leak: 13.56 B/s (using 677 data points, chi2=0.21)
[2025-11-27 16:01:57] 2025-11-27 15:01:01,104 | INFO     | could have reported an average CPU frequency of 2804 MHz (27 samples)
[2025-11-27 16:01:57] 2025-11-27 15:01:01,105 | INFO     | ..............................
[2025-11-27 16:01:57] 2025-11-27 15:01:01,105 | INFO     | . Timing measurements:
[2025-11-27 16:01:57] 2025-11-27 15:01:01,105 | INFO     | . get job = 0 s
[2025-11-27 16:01:57] 2025-11-27 15:01:01,105 | INFO     | . initial setup = 1 s
[2025-11-27 16:01:57] 2025-11-27 15:01:01,105 | INFO     | . payload setup = 9 s
[2025-11-27 16:01:57] 2025-11-27 15:01:01,106 | INFO     | . stage-in = 0 s
[2025-11-27 16:01:57] 2025-11-27 15:01:01,106 | INFO     | . payload execution = 43181 s
[2025-11-27 16:01:57] 2025-11-27 15:01:01,106 | INFO     | . stage-out = 3 s
[2025-11-27 16:01:57] 2025-11-27 15:01:01,106 | INFO     | . log creation = 0 s
[2025-11-27 16:01:57] 2025-11-27 15:01:01,106 | INFO     | ..............................
[2025-11-27 16:01:57] 2025-11-27 15:01:01,539 | INFO     | 
[2025-11-27 16:01:57] 2025-11-27 15:01:01,539 | INFO     | job summary report
[2025-11-27 16:01:57] 2025-11-27 15:01:01,539 | INFO     | --------------------------------------------------
[2025-11-27 16:01:57] 2025-11-27 15:01:01,540 | INFO     | PanDA job id: 6895417900
[2025-11-27 16:01:57] 2025-11-27 15:01:01,540 | INFO     | task id: 47556149
[2025-11-27 16:01:57] 2025-11-27 15:01:01,540 | INFO     | errors: (none)
[2025-11-27 16:01:57] 2025-11-27 15:01:01,540 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 16:01:57] 2025-11-27 15:01:01,540 | INFO     | pilot state: finished 
[2025-11-27 16:01:57] 2025-11-27 15:01:01,540 | INFO     | transexitcode: 0
[2025-11-27 16:01:57] 2025-11-27 15:01:01,541 | INFO     | exeerrorcode: 0
[2025-11-27 16:01:57] 2025-11-27 15:01:01,541 | INFO     | exeerrordiag: 
[2025-11-27 16:01:57] 2025-11-27 15:01:01,541 | INFO     | exitcode: 0
[2025-11-27 16:01:57] 2025-11-27 15:01:01,541 | INFO     | exitmsg: OK
[2025-11-27 16:01:57] 2025-11-27 15:01:01,541 | INFO     | cpuconsumptiontime: 498702 s
[2025-11-27 16:01:57] 2025-11-27 15:01:01,541 | INFO     | nevents: 1000
[2025-11-27 16:01:57] 2025-11-27 15:01:01,542 | INFO     | neventsw: 0
[2025-11-27 16:01:57] 2025-11-27 15:01:01,542 | INFO     | pid: 2621444
[2025-11-27 16:01:57] 2025-11-27 15:01:01,542 | INFO     | pgrp: 2621444
[2025-11-27 16:01:57] 2025-11-27 15:01:01,542 | INFO     | corecount: 12
[2025-11-27 16:01:57] 2025-11-27 15:01:01,542 | INFO     | event service: False
[2025-11-27 16:01:57] 2025-11-27 15:01:01,542 | INFO     | sizes: {0: 2284144, 1: 2284343, 6: 2284605, 12: 2284633, 43193: 2328635, 43197: 2337657, 43200: 2337841, 43205: 2338087}
[2025-11-27 16:01:57] 2025-11-27 15:01:01,542 | INFO     | --------------------------------------------------
[2025-11-27 16:01:57] 2025-11-27 15:01:01,543 | INFO     | 
[2025-11-27 16:01:57] 2025-11-27 15:01:01,543 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-11-27 16:01:57] 2025-11-27 15:01:01,562 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,563 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,564 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 16:01:57] 2025-11-27 15:01:01,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,565 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 16:01:57] 2025-11-27 15:01:01,566 | INFO     | job 6895417900 has completed (purged errors)
[2025-11-27 16:01:57] 2025-11-27 15:01:01,566 | INFO     | overall cleanup function is called
[2025-11-27 16:01:57] 2025-11-27 15:01:02,601 | INFO     | --- collectZombieJob: --- 10, [2621444]
[2025-11-27 16:01:57] 2025-11-27 15:01:02,601 | INFO     | zombie collector waiting for pid 2621444
[2025-11-27 16:01:57] 2025-11-27 15:01:02,601 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 16:01:57] 2025-11-27 15:01:02,602 | INFO     | collected zombie processes
[2025-11-27 16:01:57] 2025-11-27 15:01:02,602 | INFO     | will attempt to kill all subprocesses of pid=2621444
[2025-11-27 16:01:57] 2025-11-27 15:01:02,786 | INFO     | process IDs to be killed: [2621444] (in reverse order)
[2025-11-27 16:01:57] 2025-11-27 15:01:02,845 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 16:01:57] 2025-11-27 15:01:02,845 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 16:01:57] 2025-11-27 15:01:02,852 | INFO     | did not find any defunct processes belonging to 2621444
[2025-11-27 16:01:57] 2025-11-27 15:01:02,859 | INFO     | did not find any defunct processes belonging to 2621444
[2025-11-27 16:01:57] 2025-11-27 15:01:02,861 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 16:01:57] 2025-11-27 15:01:02,862 | INFO     | ready for new job
[2025-11-27 16:01:57] 2025-11-27 15:01:02,862 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 16:01:57] 2025-11-27 15:01:02,867 | INFO     | ***************************************
[2025-11-27 16:01:57] 2025-11-27 15:01:02,867 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 16:01:57] 2025-11-27 15:01:02,867 | INFO     | ***************************************
[2025-11-27 16:01:57] 2025-11-27 15:01:02,867 | INFO     | 
[2025-11-27 16:01:57] 2025-11-27 15:01:02,869 | INFO     | architecture information:
[2025-11-27 16:01:57] 2025-11-27 15:01:02,869 | INFO     | executing command: cat /etc/os-release
[2025-11-27 16:01:57] 2025-11-27 15:01:02,891 | INFO     | cat /etc/os-release:
[2025-11-27 16:01:57] NAME="CentOS Linux"
[2025-11-27 16:01:57] VERSION="7 (Core)"
[2025-11-27 16:01:57] ID="centos"
[2025-11-27 16:01:57] ID_LIKE="rhel fedora"
[2025-11-27 16:01:57] VERSION_ID="7"
[2025-11-27 16:01:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 16:01:57] ANSI_COLOR="0;31"
[2025-11-27 16:01:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 16:01:57] HOME_URL="https://www.centos.org/"
[2025-11-27 16:01:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 16:01:57] 
[2025-11-27 16:01:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 16:01:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 16:01:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 16:01:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 16:01:57] 
[2025-11-27 16:01:57] 2025-11-27 15:01:02,891 | INFO     | ***************************************
[2025-11-27 16:01:57] 2025-11-27 15:01:03,394 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-11-27 16:01:57] 2025-11-27 15:01:03,409 | INFO     | sufficient remaining disk space (1714099847168 B)
[2025-11-27 16:01:57] 2025-11-27 15:01:03,410 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 16:01:57] 2025-11-27 15:01:03,410 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 16:01:57] 2025-11-27 15:01:03,410 | INFO     | update_server=False
[2025-11-27 16:01:57] 2025-11-27 15:01:03,411 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 16:01:57] 2025-11-27 15:01:03,563 | INFO     | all payload control threads have been joined
[2025-11-27 16:01:57] 2025-11-27 15:01:03,579 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 16:01:57] 2025-11-27 15:01:04,022 | INFO     | all job control threads have been joined
[2025-11-27 16:01:57] 2025-11-27 15:01:04,046 | INFO     | all data control threads have been joined
[2025-11-27 16:01:57] 2025-11-27 15:01:04,162 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:01:57] 2025-11-27 15:01:04,162 | INFO     | aborting loop
[2025-11-27 16:01:57] 2025-11-27 15:01:04,416 | INFO     | [job] retrieve thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:04,555 | INFO     | [payload] failed_post thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:04,568 | INFO     | [payload] control thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:04,584 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:04,584 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:04,802 | INFO     | [job] validate thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:05,027 | INFO     | [job] control thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:05,051 | INFO     | [data] control thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:05,168 | INFO     | [job] job monitor thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:05,226 | INFO     | [payload] validate_post thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:05,585 | INFO     | [data] copytool_out thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:05,609 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:05,777 | INFO     | [data] copytool_in thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:06,279 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 16:01:57] 2025-11-27 15:01:06,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 16:01:57] 2025-11-27 15:01:07,284 | INFO     | [job] queue monitor thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:10,533 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:13,743 | INFO     | job.realtimelogging is not enabled
[2025-11-27 16:01:57] 2025-11-27 15:01:14,748 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 16:01:57] 2025-11-27 15:01:33,042 | INFO     | PID=2613901 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 16:01:57] 2025-11-27 15:01:33,042 | INFO     | .. there are 2 such processes running
[2025-11-27 16:01:57] 2025-11-27 15:01:33,044 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 16:01:57] 2025-11-27 15:01:33,044 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 16:01:57] 2025-11-27 15:01:33,044 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 16:01:57] 2025-11-27 15:01:50,777 | INFO     | [monitor] cgroup control has ended
[2025-11-27 16:01:57] 2025-11-27 15:01:52,488 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140064565425984)>', '<ExcThread(monitor, started 140063849576192)>']
[2025-11-27 16:01:57] 2025-11-27 15:01:53,136 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 16:01:57] 2025-11-27 15:01:53,136 | INFO     | [monitor] control thread has ended
[2025-11-27 16:01:57] 2025-11-27 15:01:57,513 | INFO     | all workflow threads have been joined
[2025-11-27 16:01:57] 2025-11-27 15:01:57,513 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 16:01:57] 2025-11-27 15:01:57,514 | INFO     | traces error code: 0
[2025-11-27 16:01:57] 2025-11-27 15:01:57,514 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 16:01:57] 2025-11-27 15:01:57,705 [wrapper] ==== pilot stdout END ====
[2025-11-27 16:01:57] 2025-11-27 15:01:57,708 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 16:01:57] 2025-11-27 15:01:57,710 [wrapper] pilotpid: 2613901
[2025-11-27 16:01:57] 2025-11-27 15:01:57,713 [wrapper] Pilot exit status: 0
[2025-11-27 16:01:57] 2025-11-27 15:01:57,730 [wrapper] pandaids: 6895417900
[2025-11-27 16:01:57] 2025-11-27 15:01:57,768 [wrapper] cleanup supervisor_pilot 3058435 2613902
[2025-11-27 16:01:57] 2025-11-27 15:01:57,771 [wrapper] Test setup, not cleaning
[2025-11-27 16:01:57] 2025-11-27 15:01:57,773 [wrapper] apfmon messages muted
[2025-11-27 16:01:57] 2025-11-27 15:01:57,776 [wrapper] ==== wrapper stdout END ====
[2025-11-27 16:01:57] 2025-11-27 15:01:57,779 [wrapper] ==== wrapper stderr END ====
[2025-11-27 16:01:57]  *** Error codes and diagnostics ***
[2025-11-27 16:01:57]     "exeErrorCode": 0,
[2025-11-27 16:01:57]     "exeErrorDiag": "",
[2025-11-27 16:01:57]     "pilotErrorCode": 0,
[2025-11-27 16:01:57]     "pilotErrorDiag": "",
[2025-11-27 16:01:57]  *** Listing of results directory ***
[2025-11-27 16:01:57] total 1319452
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc    576529 Nov 24 08:53 pilot3.tar.gz
[2025-11-27 16:01:57] -rwx------ 1 boinc boinc     36292 Nov 24 09:35 runpilot2-wrapper.sh
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc      5112 Nov 24 09:35 queuedata.json
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc       100 Nov 27 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 16:01:57] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 04:00 run_atlas
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc       105 Nov 27 04:00 job.xml
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc      6296 Nov 27 04:00 init_data.xml
[2025-11-27 16:01:57] -rw-r--r-- 2 boinc boinc 410198028 Nov 27 04:00 EVNT.47483658._001274.pool.root.1
[2025-11-27 16:01:57] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:00 start_atlas.sh
[2025-11-27 16:01:57] drwxrwx--x 2 boinc boinc      4096 Nov 27 04:00 shared
[2025-11-27 16:01:57] -rw-r--r-- 2 boinc boinc    590106 Nov 27 04:00 input.tar.gz
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc         0 Nov 27 04:00 boinc_lockfile
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc      2786 Nov 27 04:00 pandaJob.out
[2025-11-27 16:01:57] -rw------- 1 boinc boinc    991554 Nov 27 04:00 agis_schedconf.cvmfs.json
[2025-11-27 16:01:57] drwx------ 5 boinc boinc      4096 Nov 27 04:00 pilot3
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc       533 Nov 27 15:51 boinc_task_state.xml
[2025-11-27 16:01:57] -rw------- 1 boinc boinc 920221773 Nov 27 16:00 HITS.47556149._002610.pool.root.1
[2025-11-27 16:01:57] -rw------- 1 boinc boinc      1046 Nov 27 16:00 memory_monitor_summary.json
[2025-11-27 16:01:57] -rw------- 1 boinc boinc   1516240 Nov 27 16:00 agis_ddmendpoints.agis.ALL.json
[2025-11-27 16:01:57] -rw------- 1 boinc boinc   2406836 Nov 27 16:00 log.47556149._002610.job.log.tgz.1
[2025-11-27 16:01:57] -rw------- 1 boinc boinc      8640 Nov 27 16:01 heartbeat.json
[2025-11-27 16:01:57] -rw------- 1 boinc boinc        95 Nov 27 16:01 pilot_heartbeat.json
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc      8192 Nov 27 16:01 boinc_mmap_file
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc        29 Nov 27 16:01 wrapper_checkpoint.txt
[2025-11-27 16:01:57] -rw------- 1 boinc boinc      4897 Nov 27 16:01 pilotlog.txt
[2025-11-27 16:01:57] -rw------- 1 boinc boinc   5980520 Nov 27 16:01 log.47556149._002610.job.log.1
[2025-11-27 16:01:57] -rw------- 1 boinc boinc       353 Nov 27 16:01 output.list
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc       620 Nov 27 16:01 runtime_log
[2025-11-27 16:01:57] -rw------- 1 boinc boinc   8407040 Nov 27 16:01 result.tar.gz
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc      8842 Nov 27 16:01 runtime_log.err
[2025-11-27 16:01:57] -rw------- 1 boinc boinc       667 Nov 27 16:01 MBpMDmFEhh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiyIKDm48ff0m.diag
[2025-11-27 16:01:57] -rw-r--r-- 1 boinc boinc     21351 Nov 27 16:01 stderr.txt
[2025-11-27 16:01:57] HITS file was successfully produced:
[2025-11-27 16:01:57] -rw------- 1 boinc boinc 920221773 Nov 27 16:00 shared/HITS.pool.root.1
[2025-11-27 16:01:57]  *** Contents of shared directory: ***
[2025-11-27 16:01:57] total 1308060
[2025-11-27 16:01:57] -rw-r--r-- 2 boinc boinc 410198028 Nov 27 04:00 ATLAS.root_0
[2025-11-27 16:01:57] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:00 start_atlas.sh
[2025-11-27 16:01:57] -rw-r--r-- 2 boinc boinc    590106 Nov 27 04:00 input.tar.gz
[2025-11-27 16:01:57] -rw------- 1 boinc boinc 920221773 Nov 27 16:00 HITS.pool.root.1
[2025-11-27 16:01:57] -rw------- 1 boinc boinc   8407040 Nov 27 16:01 result.tar.gz
16:01:59 (2610065): run_atlas exited; CPU time 498865.618994
16:01:59 (2610065): called boinc_finish(0)

</stderr_txt>
]]>

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