Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
04:00:29 (4160940): wrapper (7.7.26015): starting
04:00:29 (4160940): wrapper: running run_atlas (--nthreads 3)
[2025-11-27 04:00:29] Arguments: --nthreads 3
[2025-11-27 04:00:29] Threads: 3
[2025-11-27 04:00:29] Checking for CVMFS
[2025-11-27 04:00:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-27 04:00:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-27 04:00:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-27 04:00:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-27 04:00:29] 2.9.2.0 3650771 3790 82128 153343 0 81 7348362 36864001 0 130560 2 1409397 99.980 137373 162 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-27 04:00:29] CVMFS is ok
[2025-11-27 04:00:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 04:00:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 04:00:29] Further information can be found at the LHC@home message board.
[2025-11-27 04:00:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 04:00:29] Checking for apptainer binary...
[2025-11-27 04:00:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-27 04:00:29] Running /usr/bin/apptainer --version
[2025-11-27 04:00:29] apptainer version 1.4.1-1.1
[2025-11-27 04:00:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 04:00:29] thA330a
[2025-11-27 04:00:29] apptainer works
[2025-11-27 04:00:40] Set ATHENA_PROC_NUMBER=3
[2025-11-27 04:00:40] Set ATHENA_CORE_NUMBER=3
[2025-11-27 04:00:40] Starting ATLAS job with PandaID=6897531537
[2025-11-27 04:00:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 11:58:24]  *** The last 200 lines of the pilot log: ***
[2025-11-27 11:58:24] HOME_URL="https://www.centos.org/"
[2025-11-27 11:58:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 11:58:24] 
[2025-11-27 11:58:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 11:58:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 11:58:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 11:58:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 11:58:24] 
[2025-11-27 11:58:24] 2025-11-27 10:57:25,765 | INFO     | ***************************************
[2025-11-27 11:58:24] 2025-11-27 10:57:26,268 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-27 11:58:24] 2025-11-27 10:57:26,281 | INFO     | sufficient remaining disk space (253257318400 B)
[2025-11-27 11:58:24] 2025-11-27 10:57:26,282 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 11:58:24] 2025-11-27 10:57:26,282 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 11:58:24] 2025-11-27 10:57:26,282 | INFO     | update_server=False
[2025-11-27 11:58:24] 2025-11-27 10:57:26,282 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 11:58:24] 2025-11-27 10:57:26,282 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:58:24] 2025-11-27 10:57:26,316 | INFO     | all payload control threads have been joined
[2025-11-27 11:58:24] 2025-11-27 10:57:26,326 | INFO     | all data control threads have been joined
[2025-11-27 11:58:24] 2025-11-27 10:57:26,571 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 11:58:24] 2025-11-27 10:57:26,571 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 11:58:24] 2025-11-27 10:57:26,571 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 11:58:24] 2025-11-27 10:57:26,571 | INFO     | will abort loop
[2025-11-27 11:58:24] 2025-11-27 10:57:26,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 11:58:24] 2025-11-27 10:57:27,287 | INFO     | [job] retrieve thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:27,288 | INFO     | [job] queue monitor thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:27,322 | INFO     | [payload] control thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:27,332 | INFO     | [data] control thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:27,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 11:58:24] 2025-11-27 10:57:27,577 | INFO     | [job] job monitor thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:27,669 | INFO     | [payload] validate_post thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:27,689 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:27,871 | INFO     | all job control threads have been joined
[2025-11-27 11:58:24] 2025-11-27 10:57:28,008 | INFO     | [data] copytool_in thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:28,512 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:28,518 | INFO     | [job] validate thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:28,669 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:28,683 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:28,701 | INFO     | [data] copytool_out thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:28,747 | INFO     | [payload] failed_post thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:28,877 | INFO     | [job] control thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:31,345 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 11:58:24] 2025-11-27 10:57:55,799 | INFO     | PID=4164671 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 11:58:24] 2025-11-27 10:57:55,799 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 11:58:24] 2025-11-27 10:57:55,799 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 11:58:24] 2025-11-27 10:57:55,799 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 11:58:24] 2025-11-27 10:58:18,962 | INFO     | [monitor] cgroup control has ended
[2025-11-27 11:58:24] 2025-11-27 10:58:19,273 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140314916308800)>', '<ExcThread(monitor, started 140314291463936)>']
[2025-11-27 11:58:24] 2025-11-27 10:58:19,922 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 11:58:24] 2025-11-27 10:58:19,923 | INFO     | [monitor] control thread has ended
[2025-11-27 11:58:24] 2025-11-27 10:58:24,299 | INFO     | all workflow threads have been joined
[2025-11-27 11:58:24] 2025-11-27 10:58:24,300 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 11:58:24] 2025-11-27 10:58:24,300 | INFO     | traces error code: 0
[2025-11-27 11:58:24] 2025-11-27 10:58:24,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 11:58:24] 2025-11-27 10:58:24,352 [wrapper] ==== pilot stdout END ====
[2025-11-27 11:58:24] 2025-11-27 10:58:24,355 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 11:58:24] 2025-11-27 10:58:24,357 [wrapper] pilotpid: 4164671
[2025-11-27 11:58:24] 2025-11-27 10:58:24,359 [wrapper] Pilot exit status: 0
[2025-11-27 11:58:24] 2025-11-27 10:58:24,366 [wrapper] pandaids: 6897531537
[2025-11-27 11:58:24] 2025-11-27 10:58:24,384 [wrapper] cleanup supervisor_pilot   28171 4164672
[2025-11-27 11:58:24] 2025-11-27 10:58:24,386 [wrapper] Test setup, not cleaning
[2025-11-27 11:58:24] 2025-11-27 10:58:24,389 [wrapper] apfmon messages muted
[2025-11-27 11:58:24] 2025-11-27 10:58:24,391 [wrapper] ==== wrapper stdout END ====
[2025-11-27 11:58:24] 2025-11-27 10:58:24,393 [wrapper] ==== wrapper stderr END ====
[2025-11-27 11:58:24]  *** Error codes and diagnostics ***
[2025-11-27 11:58:24]     "exeErrorCode": 0,
[2025-11-27 11:58:24]     "exeErrorDiag": "",
[2025-11-27 11:58:24]     "pilotErrorCode": 0,
[2025-11-27 11:58:24]     "pilotErrorDiag": "",
[2025-11-27 11:58:24]  *** Listing of results directory ***
[2025-11-27 11:58:24] total 1320844
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-27 11:58:24] -rwx------ 1 boinc boinc     36292 Nov 25 18:01 runpilot2-wrapper.sh
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc      5112 Nov 25 18:02 queuedata.json
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc       100 Nov 27 04:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 11:58:24] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 04:00 run_atlas
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc       105 Nov 27 04:00 job.xml
[2025-11-27 11:58:24] -rw-r--r-- 2 boinc boinc 411776491 Nov 27 04:00 EVNT.47483658._002301.pool.root.1
[2025-11-27 11:58:24] -rw-r--r-- 2 boinc boinc    590105 Nov 27 04:00 input.tar.gz
[2025-11-27 11:58:24] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:00 start_atlas.sh
[2025-11-27 11:58:24] drwxrwx--x 2 boinc boinc      4096 Nov 27 04:00 shared
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc         0 Nov 27 04:00 boinc_setup_complete
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc      6441 Nov 27 04:00 init_data.xml
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc         0 Nov 27 04:00 boinc_lockfile
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc      2786 Nov 27 04:00 pandaJob.out
[2025-11-27 11:58:24] -rw------- 1 boinc boinc    991554 Nov 27 04:00 agis_schedconf.cvmfs.json
[2025-11-27 11:58:24] drwx------ 5 boinc boinc      4096 Nov 27 04:00 pilot3
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc       531 Nov 27 11:54 boinc_task_state.xml
[2025-11-27 11:58:24] -rw------- 1 boinc boinc 926492125 Nov 27 11:56 HITS.47556161._002850.pool.root.1
[2025-11-27 11:58:24] -rw------- 1 boinc boinc        95 Nov 27 11:57 pilot_heartbeat.json
[2025-11-27 11:58:24] -rw------- 1 boinc boinc      1024 Nov 27 11:57 memory_monitor_summary.json
[2025-11-27 11:58:24] -rw------- 1 boinc boinc   1516240 Nov 27 11:57 agis_ddmendpoints.agis.ALL.json
[2025-11-27 11:58:24] -rw------- 1 boinc boinc   1159761 Nov 27 11:57 log.47556161._002850.job.log.tgz.1
[2025-11-27 11:58:24] -rw------- 1 boinc boinc      8569 Nov 27 11:57 heartbeat.json
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc        28 Nov 27 11:58 wrapper_checkpoint.txt
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc      8192 Nov 27 11:58 boinc_mmap_file
[2025-11-27 11:58:24] -rw------- 1 boinc boinc      4938 Nov 27 11:58 pilotlog.txt
[2025-11-27 11:58:24] -rw------- 1 boinc boinc   4024808 Nov 27 11:58 log.47556161._002850.job.log.1
[2025-11-27 11:58:24] -rw------- 1 boinc boinc       353 Nov 27 11:58 output.list
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc       620 Nov 27 11:58 runtime_log
[2025-11-27 11:58:24] -rw------- 1 boinc boinc   5201920 Nov 27 11:58 result.tar.gz
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc      8903 Nov 27 11:58 runtime_log.err
[2025-11-27 11:58:24] -rw------- 1 boinc boinc       666 Nov 27 11:58 4pLKDmKbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmJbMKDmmLkyDm.diag
[2025-11-27 11:58:24] -rw-r--r-- 1 boinc boinc      8584 Nov 27 11:58 stderr.txt
[2025-11-27 11:58:24] HITS file was successfully produced:
[2025-11-27 11:58:24] -rw------- 1 boinc boinc 926492125 Nov 27 11:56 shared/HITS.pool.root.1
[2025-11-27 11:58:24]  *** Contents of shared directory: ***
[2025-11-27 11:58:24] total 1312592
[2025-11-27 11:58:24] -rw-r--r-- 2 boinc boinc 411776491 Nov 27 04:00 ATLAS.root_0
[2025-11-27 11:58:24] -rw-r--r-- 2 boinc boinc    590105 Nov 27 04:00 input.tar.gz
[2025-11-27 11:58:24] -rw-r--r-- 2 boinc boinc     15847 Nov 27 04:00 start_atlas.sh
[2025-11-27 11:58:24] -rw------- 1 boinc boinc 926492125 Nov 27 11:56 HITS.pool.root.1
[2025-11-27 11:58:24] -rw------- 1 boinc boinc   5201920 Nov 27 11:58 result.tar.gz
11:58:25 (4160940): run_atlas exited; CPU time 84485.651599
11:58:25 (4160940): called boinc_finish(0)

</stderr_txt>
]]>

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