Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:57:48 (1797992): wrapper (7.7.26015): starting
13:57:48 (1797992): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 13:57:48] Arguments: --nthreads 8
[2025-11-26 13:57:48] Threads: 8
[2025-11-26 13:57:48] Checking for CVMFS
[2025-11-26 13:57:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:57:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:57:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:57:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:57:49] 2.13.3.0 12763 30393 185796 153331 3 929 35918308 40960001 51667 16776704 0 261288922 99.741 161450949 35715 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 13:57:49] CVMFS is ok
[2025-11-26 13:57:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:57:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:57:49] Further information can be found at the LHC@home message board.
[2025-11-26 13:57:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:57:49] Checking for apptainer binary...
[2025-11-26 13:57:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:57:49] Running /usr/bin/apptainer --version
[2025-11-26 13:57:49] apptainer version 1.4.4-1.el9
[2025-11-26 13:57:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:57:50] c7-2-17.aglt2.org
[2025-11-26 13:57:50] apptainer works
[2025-11-26 13:57:50] Set ATHENA_PROC_NUMBER=8
[2025-11-26 13:57:50] Set ATHENA_CORE_NUMBER=8
[2025-11-26 13:57:50] Starting ATLAS job with PandaID=6891605094
[2025-11-26 13:57:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 23:33:25]  *** The last 200 lines of the pilot log: ***
[2025-11-26 23:33:25] 2025-11-27 04:32:49,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 23:33:25] 2025-11-27 04:32:50,655 | INFO     | time since job start (34472s) is within the limit (172800.0s)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,366 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-26 23:33:25] 2025-11-27 04:32:51,376 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3368.203666666666
[2025-11-26 23:33:25] 2025-11-27 04:32:51,389 | INFO     | using path: /tmp/boinchome/slots/8/PanDA_Pilot-6891605094/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,390 | INFO     | extracted standard info from prmon json
[2025-11-26 23:33:25] 2025-11-27 04:32:51,390 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 23:33:25] 2025-11-27 04:32:51,390 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 23:33:25] 2025-11-27 04:32:51,397 | INFO     | fitting pss+swap vs Time
[2025-11-26 23:33:25] 2025-11-27 04:32:51,398 | INFO     | sum of square deviations: 55631156413.08347
[2025-11-26 23:33:25] 2025-11-27 04:32:51,404 | INFO     | sum of deviations: 1044348452316.3353
[2025-11-26 23:33:25] 2025-11-27 04:32:51,404 | INFO     | mean x: 1764200734.5833333
[2025-11-26 23:33:25] 2025-11-27 04:32:51,404 | INFO     | mean y: 2907821.929078014
[2025-11-26 23:33:25] 2025-11-27 04:32:51,404 | INFO     | intersect: -33115949047.710545
[2025-11-26 23:33:25] 2025-11-27 04:32:51,405 | INFO     | chi2: 4.984518523371323
[2025-11-26 23:33:25] 2025-11-27 04:32:51,405 | INFO     | sum of square deviations: 54164706043.04844
[2025-11-26 23:33:25] 2025-11-27 04:32:51,411 | INFO     | sum of deviations: 1172099910988.8633
[2025-11-26 23:33:25] 2025-11-27 04:32:51,412 | INFO     | mean x: 1764200582.0840788
[2025-11-26 23:33:25] 2025-11-27 04:32:51,412 | INFO     | mean y: 2921078.726296959
[2025-11-26 23:33:25] 2025-11-27 04:32:51,412 | INFO     | intersect: -38173587136.49065
[2025-11-26 23:33:25] 2025-11-27 04:32:51,412 | INFO     | chi2: 3.1328953690514307
[2025-11-26 23:33:25] 2025-11-27 04:32:51,412 | INFO     | current chi2=3.1328953690514307 (change=37.14748266333115 %)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,413 | INFO     | sum of square deviations: 52724256160.512634
[2025-11-26 23:33:25] 2025-11-27 04:32:51,419 | INFO     | sum of deviations: 1161593565364.1768
[2025-11-26 23:33:25] 2025-11-27 04:32:51,420 | INFO     | mean x: 1764200429.5848374
[2025-11-26 23:33:25] 2025-11-27 04:32:51,420 | INFO     | mean y: 2919960.187725632
[2025-11-26 23:33:25] 2025-11-27 04:32:51,420 | INFO     | intersect: -38865032216.8836
[2025-11-26 23:33:25] 2025-11-27 04:32:51,420 | INFO     | chi2: 3.0974103914657176
[2025-11-26 23:33:25] 2025-11-27 04:32:51,420 | INFO     | current chi2=3.0974103914657176 (change=1.1326576028122242 %)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,421 | INFO     | right removable region: 553
[2025-11-26 23:33:25] 2025-11-27 04:32:51,421 | INFO     | sum of square deviations: 54164677373.048416
[2025-11-26 23:33:25] 2025-11-27 04:32:51,427 | INFO     | sum of deviations: 854856812056.5325
[2025-11-26 23:33:25] 2025-11-27 04:32:51,427 | INFO     | mean x: 1764200887.0840788
[2025-11-26 23:33:25] 2025-11-27 04:32:51,427 | INFO     | mean y: 2927509.520572451
[2025-11-26 23:33:25] 2025-11-27 04:32:51,428 | INFO     | intersect: -27840663910.271233
[2025-11-26 23:33:25] 2025-11-27 04:32:51,428 | INFO     | chi2: 2.173057978515134
[2025-11-26 23:33:25] 2025-11-27 04:32:51,428 | INFO     | current chi2=2.173057978515134 (change=56.40385388626529 %)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,429 | INFO     | sum of square deviations: 52724232796.68065
[2025-11-26 23:33:25] 2025-11-27 04:32:51,435 | INFO     | sum of deviations: 799621873699.8286
[2025-11-26 23:33:25] 2025-11-27 04:32:51,435 | INFO     | mean x: 1764201039.5830326
[2025-11-26 23:33:25] 2025-11-27 04:32:51,435 | INFO     | mean y: 2933356.4711191338
[2025-11-26 23:33:25] 2025-11-27 04:32:51,435 | INFO     | intersect: -26753145699.14262
[2025-11-26 23:33:25] 2025-11-27 04:32:51,436 | INFO     | chi2: 2.0787195826838234
[2025-11-26 23:33:25] 2025-11-27 04:32:51,436 | INFO     | current chi2=2.0787195826838234 (change=4.341273760940909 %)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,436 | INFO     | left removable region: 20
[2025-11-26 23:33:25] 2025-11-27 04:32:51,437 | INFO     | sum of square deviations: 46952930167.201004
[2025-11-26 23:33:25] 2025-11-27 04:32:51,442 | INFO     | sum of deviations: 833991436528.1709
[2025-11-26 23:33:25] 2025-11-27 04:32:51,443 | INFO     | mean x: 1764201009.0844278
[2025-11-26 23:33:25] 2025-11-27 04:32:51,443 | INFO     | mean y: 2955014.7073170734
[2025-11-26 23:33:25] 2025-11-27 04:32:51,443 | INFO     | intersect: -31333290213.254364
[2025-11-26 23:33:25] 2025-11-27 04:32:51,443 | INFO     | chi2: 0.11701869686576429
[2025-11-26 23:33:25] 2025-11-27 04:32:51,443 | INFO     | current memory leak: 17.76 B/s (using 533 data points, chi2=0.12)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,444 | INFO     | could have reported an average CPU frequency of 3355 MHz (22 samples)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,445 | INFO     | ..............................
[2025-11-26 23:33:25] 2025-11-27 04:32:51,445 | INFO     | . Timing measurements:
[2025-11-26 23:33:25] 2025-11-27 04:32:51,445 | INFO     | . get job = 0 s
[2025-11-26 23:33:25] 2025-11-27 04:32:51,445 | INFO     | . initial setup = 6 s
[2025-11-26 23:33:25] 2025-11-27 04:32:51,445 | INFO     | . payload setup = 18 s
[2025-11-26 23:33:25] 2025-11-27 04:32:51,445 | INFO     | . stage-in = 0 s
[2025-11-26 23:33:25] 2025-11-27 04:32:51,445 | INFO     | . payload execution = 34407 s
[2025-11-26 23:33:25] 2025-11-27 04:32:51,445 | INFO     | . stage-out = 2 s
[2025-11-26 23:33:25] 2025-11-27 04:32:51,445 | INFO     | . log creation = 0 s
[2025-11-26 23:33:25] 2025-11-27 04:32:51,445 | INFO     | ..............................
[2025-11-26 23:33:25] 2025-11-27 04:32:51,524 | INFO     | 
[2025-11-26 23:33:25] 2025-11-27 04:32:51,524 | INFO     | job summary report
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | --------------------------------------------------
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | PanDA job id: 6891605094
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | task id: 47493068
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | errors: (none)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | pilot state: finished 
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | transexitcode: 0
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | exeerrorcode: 0
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | exeerrordiag: 
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | exitcode: 0
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | exitmsg: OK
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | cpuconsumptiontime: 181113 s
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | nevents: 1000
[2025-11-26 23:33:25] 2025-11-27 04:32:51,525 | INFO     | neventsw: 0
[2025-11-26 23:33:25] 2025-11-27 04:32:51,526 | INFO     | pid: 1827164
[2025-11-26 23:33:25] 2025-11-27 04:32:51,526 | INFO     | pgrp: 1827164
[2025-11-26 23:33:25] 2025-11-27 04:32:51,526 | INFO     | corecount: 8
[2025-11-26 23:33:25] 2025-11-27 04:32:51,526 | INFO     | event service: False
[2025-11-26 23:33:25] 2025-11-27 04:32:51,526 | INFO     | sizes: {0: 2284133, 1: 2284332, 11: 2284622, 22: 2284622, 34430: 2325554, 34433: 2334548, 34435: 2334732, 34441: 2334978}
[2025-11-26 23:33:25] 2025-11-27 04:32:51,526 | INFO     | --------------------------------------------------
[2025-11-26 23:33:25] 2025-11-27 04:32:51,526 | INFO     | 
[2025-11-26 23:33:25] 2025-11-27 04:32:51,526 | INFO     | executing command: ls -lF /tmp/boinchome/slots/8
[2025-11-26 23:33:25] 2025-11-27 04:32:51,563 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,563 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,563 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,563 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 23:33:25] 2025-11-27 04:32:51,564 | INFO     | job 6891605094 has completed (purged errors)
[2025-11-26 23:33:25] 2025-11-27 04:32:51,565 | INFO     | overall cleanup function is called
[2025-11-26 23:33:25] 2025-11-27 04:32:52,580 | INFO     | --- collectZombieJob: --- 10, [1827164]
[2025-11-26 23:33:25] 2025-11-27 04:32:52,580 | INFO     | zombie collector waiting for pid 1827164
[2025-11-26 23:33:25] 2025-11-27 04:32:52,580 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 23:33:25] 2025-11-27 04:32:52,581 | INFO     | collected zombie processes
[2025-11-26 23:33:25] 2025-11-27 04:32:52,581 | INFO     | will attempt to kill all subprocesses of pid=1827164
[2025-11-26 23:33:25] 2025-11-27 04:32:53,693 | INFO     | process IDs to be killed: [1827164] (in reverse order)
[2025-11-26 23:33:25] 2025-11-27 04:32:53,938 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 23:33:25] 2025-11-27 04:32:53,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 23:33:25] 2025-11-27 04:32:53,967 | INFO     | did not find any defunct processes belonging to 1827164
[2025-11-26 23:33:25] 2025-11-27 04:32:53,995 | INFO     | did not find any defunct processes belonging to 1827164
[2025-11-26 23:33:25] 2025-11-27 04:32:53,997 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 23:33:25] 2025-11-27 04:32:53,997 | INFO     | ready for new job
[2025-11-26 23:33:25] 2025-11-27 04:32:53,997 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 23:33:25] 2025-11-27 04:32:54,001 | INFO     | ***************************************
[2025-11-26 23:33:25] 2025-11-27 04:32:54,001 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 23:33:25] 2025-11-27 04:32:54,002 | INFO     | ***************************************
[2025-11-26 23:33:25] 2025-11-27 04:32:54,002 | INFO     | 
[2025-11-26 23:33:25] 2025-11-27 04:32:54,015 | INFO     | architecture information:
[2025-11-26 23:33:25] 2025-11-27 04:32:54,021 | INFO     | executing command: cat /etc/os-release
[2025-11-26 23:33:25] 2025-11-27 04:32:54,104 | INFO     | cat /etc/os-release:
[2025-11-26 23:33:25] NAME="CentOS Linux"
[2025-11-26 23:33:25] VERSION="7 (Core)"
[2025-11-26 23:33:25] ID="centos"
[2025-11-26 23:33:25] ID_LIKE="rhel fedora"
[2025-11-26 23:33:25] VERSION_ID="7"
[2025-11-26 23:33:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 23:33:25] ANSI_COLOR="0;31"
[2025-11-26 23:33:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 23:33:25] HOME_URL="https://www.centos.org/"
[2025-11-26 23:33:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 23:33:25] 
[2025-11-26 23:33:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 23:33:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 23:33:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 23:33:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 23:33:25] 
[2025-11-26 23:33:25] 2025-11-27 04:32:54,105 | INFO     | ***************************************
[2025-11-26 23:33:25] 2025-11-27 04:32:54,609 | INFO     | executing command: df -mP /tmp/boinchome/slots/8
[2025-11-26 23:33:25] 2025-11-27 04:32:54,659 | INFO     | sufficient remaining disk space (120388059136 B)
[2025-11-26 23:33:25] 2025-11-27 04:32:54,659 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 23:33:25] 2025-11-27 04:32:54,659 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 23:33:25] 2025-11-27 04:32:54,660 | INFO     | update_server=False
[2025-11-26 23:33:25] 2025-11-27 04:32:54,660 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 23:33:25] 2025-11-27 04:32:54,660 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 23:33:25] 2025-11-27 04:32:54,830 | INFO     | all job control threads have been joined
[2025-11-26 23:33:25] 2025-11-27 04:32:54,971 | INFO     | all data control threads have been joined
[2025-11-26 23:33:25] 2025-11-27 04:32:55,242 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:33:25] 2025-11-27 04:32:55,242 | INFO     | aborting loop
[2025-11-26 23:33:25] 2025-11-27 04:32:55,450 | INFO     | all payload control threads have been joined
[2025-11-26 23:33:25] 2025-11-27 04:32:55,665 | INFO     | [job] retrieve thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:55,796 | INFO     | [payload] validate_post thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:55,836 | INFO     | [job] control thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:55,904 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:55,946 | INFO     | [data] copytool_in thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:55,978 | INFO     | [data] control thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:55,980 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 23:33:25] 2025-11-27 04:32:56,247 | INFO     | [job] job monitor thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:56,456 | INFO     | [payload] control thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:56,536 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 23:33:25] 2025-11-27 04:32:56,666 | INFO     | [data] copytool_out thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:56,677 | INFO     | [payload] failed_post thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:56,750 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:57,067 | INFO     | [job] validate thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:57,095 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:57,541 | INFO     | [job] queue monitor thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:32:59,986 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:33:05,527 | INFO     | job.realtimelogging is not enabled
[2025-11-26 23:33:25] 2025-11-27 04:33:06,531 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 23:33:25] 2025-11-27 04:33:18,646 | INFO     | [monitor] cgroup control has ended
[2025-11-26 23:33:25] 2025-11-27 04:33:19,201 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447219144512)>', '<ExcThread(monitor, started 140446412031744)>']
[2025-11-26 23:33:25] 2025-11-27 04:33:24,227 | INFO     | all workflow threads have been joined
[2025-11-26 23:33:25] 2025-11-27 04:33:24,236 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 23:33:25] 2025-11-27 04:33:24,238 | INFO     | traces error code: 0
[2025-11-26 23:33:25] 2025-11-27 04:33:24,238 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 23:33:25] 2025-11-27 04:33:24,515 | INFO     | PID=1805114 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 23:33:25] 2025-11-27 04:33:24,516 | INFO     | .. there are 68 such processes running
[2025-11-26 23:33:25] 2025-11-27 04:33:24,516 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 23:33:25] 2025-11-27 04:33:24,516 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 23:33:25] 2025-11-27 04:33:24,516 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 23:33:25] 2025-11-27 04:33:24,516 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 23:33:25] 2025-11-27 04:33:24,516 | INFO     | [monitor] control thread has ended
[2025-11-26 23:33:25] 2025-11-27 04:33:25,028 [wrapper] ==== pilot stdout END ====
[2025-11-26 23:33:25] 2025-11-27 04:33:25,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 23:33:25] 2025-11-27 04:33:25,034 [wrapper] pilotpid: 1805114
[2025-11-26 23:33:25] 2025-11-27 04:33:25,041 [wrapper] Pilot exit status: 0
[2025-11-26 23:33:25] 2025-11-27 04:33:25,054 [wrapper] pandaids: 6891605094
[2025-11-26 23:33:25] 2025-11-27 04:33:25,193 [wrapper] cleanup supervisor_pilot  196523 1805115
[2025-11-26 23:33:25] 2025-11-27 04:33:25,202 [wrapper] Test setup, not cleaning
[2025-11-26 23:33:25] 2025-11-27 04:33:25,206 [wrapper] apfmon messages muted
[2025-11-26 23:33:25] 2025-11-27 04:33:25,209 [wrapper] ==== wrapper stdout END ====
[2025-11-26 23:33:25] 2025-11-27 04:33:25,212 [wrapper] ==== wrapper stderr END ====
[2025-11-26 23:33:25]  *** Error codes and diagnostics ***
[2025-11-26 23:33:25]     "exeErrorCode": 0,
[2025-11-26 23:33:25]     "exeErrorDiag": "",
[2025-11-26 23:33:25]     "pilotErrorCode": 0,
[2025-11-26 23:33:25]     "pilotErrorDiag": "",
[2025-11-26 23:33:25]  *** Listing of results directory ***
[2025-11-26 23:33:25] total 1300716
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 14:37 pilot3.tar.gz
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 14:40 queuedata.json
[2025-11-26 23:33:25] -rwx------. 1 boincer umatlas     36292 Nov 18 14:42 runpilot2-wrapper.sh
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas       100 Nov 26 13:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 23:33:25] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 13:57 run_atlas
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas       105 Nov 26 13:57 job.xml
[2025-11-26 23:33:25] -rw-r--r--. 2 boincer umatlas 409921223 Nov 26 13:57 EVNT.47493065._000967.pool.root.1
[2025-11-26 23:33:25] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 13:57 start_atlas.sh
[2025-11-26 23:33:25] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 13:57 shared
[2025-11-26 23:33:25] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 13:57 input.tar.gz
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas         0 Nov 26 13:57 boinc_lockfile
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 13:57 pandaJob.out
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas    991522 Nov 26 13:58 agis_schedconf.cvmfs.json
[2025-11-26 23:33:25] drwx------. 5 boincer umatlas      4096 Nov 26 13:58 pilot3
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas       533 Nov 26 23:25 boinc_task_state.xml
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas      6946 Nov 26 23:29 init_data.xml
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas 906152518 Nov 26 23:32 HITS.47493068._007562.pool.root.1
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas        95 Nov 26 23:32 pilot_heartbeat.json
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas      1075 Nov 26 23:32 memory_monitor_summary.json
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas   1516240 Nov 26 23:32 agis_ddmendpoints.agis.ALL.json
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas   1807966 Nov 26 23:32 log.47493068._007562.job.log.tgz.1
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas      8633 Nov 26 23:32 heartbeat.json
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas        29 Nov 26 23:33 wrapper_checkpoint.txt
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas      8192 Nov 26 23:33 boinc_mmap_file
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas       823 Nov 26 23:33 pilotlog.txt
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas   4161751 Nov 26 23:33 log.47493068._007562.job.log.1
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas       353 Nov 26 23:33 output.list
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas       620 Nov 26 23:33 runtime_log
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas   5990400 Nov 26 23:33 result.tar.gz
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas      8699 Nov 26 23:33 runtime_log.err
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas       664 Nov 26 23:33 EB0KDmflgf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeXGKDmRU1vvn.diag
[2025-11-26 23:33:25] -rw-r--r--. 1 boincer umatlas     21323 Nov 26 23:33 stderr.txt
[2025-11-26 23:33:25] HITS file was successfully produced:
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas 906152518 Nov 26 23:32 shared/HITS.pool.root.1
[2025-11-26 23:33:25]  *** Contents of shared directory: ***
[2025-11-26 23:33:25] total 1291688
[2025-11-26 23:33:25] -rw-r--r--. 2 boincer umatlas 409921223 Nov 26 13:57 ATLAS.root_0
[2025-11-26 23:33:25] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 13:57 start_atlas.sh
[2025-11-26 23:33:25] -rw-r--r--. 2 boincer umatlas    590098 Nov 26 13:57 input.tar.gz
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas 906152518 Nov 26 23:32 HITS.pool.root.1
[2025-11-26 23:33:25] -rw-------. 1 boincer umatlas   5990400 Nov 26 23:33 result.tar.gz
23:33:27 (1797992): run_atlas exited; CPU time 181633.218407
23:33:27 (1797992): called boinc_finish(0)

</stderr_txt>
]]>

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