Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:40:16 (1122062): wrapper (7.7.26015): starting
15:40:16 (1122062): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 15:40:16] Arguments: --nthreads 8
[2025-11-26 15:40:16] Threads: 8
[2025-11-26 15:40:16] Checking for CVMFS
[2025-11-26 15:40:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 15:40:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 15:40:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 15:40:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 15:40:17] 2.13.3.0 12275 30540 382392 153334 2 596 39929141 40960001 26243 16776704 25 185419450 99.681 156800530 36258 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 15:40:17] CVMFS is ok
[2025-11-26 15:40:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 15:40:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 15:40:17] Further information can be found at the LHC@home message board.
[2025-11-26 15:40:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 15:40:17] Checking for apptainer binary...
[2025-11-26 15:40:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 15:40:17] Running /usr/bin/apptainer --version
[2025-11-26 15:40:17] apptainer version 1.4.4-1.el9
[2025-11-26 15:40:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 15:40:17] c7-11-11.aglt2.org
[2025-11-26 15:40:17] apptainer works
[2025-11-26 15:40:17] Set ATHENA_PROC_NUMBER=8
[2025-11-26 15:40:17] Set ATHENA_CORE_NUMBER=8
[2025-11-26 15:40:17] Starting ATLAS job with PandaID=6897509109
[2025-11-26 15:40:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 04:42:21]  *** The last 200 lines of the pilot log: ***
[2025-11-27 04:42:22] 2025-11-27 09:41:43,134 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 04:42:22] 2025-11-27 09:41:43,134 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 04:42:22] 2025-11-27 09:41:43,144 | INFO     | fitting pss+swap vs Time
[2025-11-27 04:42:22] 2025-11-27 09:41:43,146 | INFO     | sum of square deviations: 139928209803.3037
[2025-11-27 04:42:22] 2025-11-27 09:41:43,215 | INFO     | sum of deviations: 1053429191096.7745
[2025-11-27 04:42:22] 2025-11-27 09:41:43,238 | INFO     | mean x: 1764213068.4758801
[2025-11-27 04:42:22] 2025-11-27 09:41:43,238 | INFO     | mean y: 2935795.852672751
[2025-11-27 04:42:22] 2025-11-27 09:41:43,238 | INFO     | intersect: -13278685889.005232
[2025-11-27 04:42:22] 2025-11-27 09:41:43,239 | INFO     | chi2: 9.220301343825918
[2025-11-27 04:42:22] 2025-11-27 09:41:43,240 | INFO     | sum of square deviations: 137210076174.84149
[2025-11-27 04:42:22] 2025-11-27 09:41:43,267 | INFO     | sum of deviations: 1314947661074.0767
[2025-11-27 04:42:22] 2025-11-27 09:41:43,267 | INFO     | mean x: 1764212915.9855642
[2025-11-27 04:42:22] 2025-11-27 09:41:43,267 | INFO     | mean y: 2950465.279527559
[2025-11-27 04:42:22] 2025-11-27 09:41:43,267 | INFO     | intersect: -16904318389.784748
[2025-11-27 04:42:22] 2025-11-27 09:41:43,268 | INFO     | chi2: 6.049420716999134
[2025-11-27 04:42:22] 2025-11-27 09:41:43,268 | INFO     | current chi2=6.049420716999134 (change=34.390206009373685 %)
[2025-11-27 04:42:22] 2025-11-27 09:41:43,269 | INFO     | sum of square deviations: 134527338835.22327
[2025-11-27 04:42:22] 2025-11-27 09:41:43,279 | INFO     | sum of deviations: 1502155517460.6719
[2025-11-27 04:42:22] 2025-11-27 09:41:43,280 | INFO     | mean x: 1764212763.4940555
[2025-11-27 04:42:22] 2025-11-27 09:41:43,280 | INFO     | mean y: 2961093.704095112
[2025-11-27 04:42:22] 2025-11-27 09:41:43,280 | INFO     | intersect: -19696543554.21847
[2025-11-27 04:42:22] 2025-11-27 09:41:43,280 | INFO     | chi2: 4.163064104157063
[2025-11-27 04:42:22] 2025-11-27 09:41:43,281 | INFO     | current chi2=4.163064104157063 (change=31.182433841001135 %)
[2025-11-27 04:42:22] 2025-11-27 09:41:43,281 | INFO     | sum of square deviations: 131879580458.98793
[2025-11-27 04:42:22] 2025-11-27 09:41:43,292 | INFO     | sum of deviations: 1575872522840.996
[2025-11-27 04:42:22] 2025-11-27 09:41:43,292 | INFO     | mean x: 1764212610.9960105
[2025-11-27 04:42:22] 2025-11-27 09:41:43,292 | INFO     | mean y: 2965333.998670213
[2025-11-27 04:42:22] 2025-11-27 09:41:43,292 | INFO     | intersect: -21078191949.351696
[2025-11-27 04:42:22] 2025-11-27 09:41:43,293 | INFO     | chi2: 3.757350776302304
[2025-11-27 04:42:22] 2025-11-27 09:41:43,293 | INFO     | current chi2=3.757350776302304 (change=9.7455460138034 %)
[2025-11-27 04:42:22] 2025-11-27 09:41:43,293 | INFO     | right removable region: 751
[2025-11-27 04:42:22] 2025-11-27 09:41:43,294 | INFO     | sum of square deviations: 137209385654.84152
[2025-11-27 04:42:22] 2025-11-27 09:41:43,305 | INFO     | sum of deviations: 775432801152.2186
[2025-11-27 04:42:22] 2025-11-27 09:41:43,305 | INFO     | mean x: 1764213220.9855642
[2025-11-27 04:42:22] 2025-11-27 09:41:43,305 | INFO     | mean y: 2951382.2926509185
[2025-11-27 04:42:22] 2025-11-27 09:41:43,305 | INFO     | intersect: -9967421950.767618
[2025-11-27 04:42:22] 2025-11-27 09:41:43,306 | INFO     | chi2: 5.9843554722399075
[2025-11-27 04:42:22] 2025-11-27 09:41:43,306 | INFO     | current chi2=5.9843554722399075 (change=35.095879743158925 %)
[2025-11-27 04:42:22] 2025-11-27 09:41:43,306 | INFO     | sum of square deviations: 134526282443.13065
[2025-11-27 04:42:22] 2025-11-27 09:41:43,317 | INFO     | sum of deviations: 696415254241.6233
[2025-11-27 04:42:22] 2025-11-27 09:41:43,317 | INFO     | mean x: 1764213373.4874504
[2025-11-27 04:42:22] 2025-11-27 09:41:43,317 | INFO     | mean y: 2955865.591809775
[2025-11-27 04:42:22] 2025-11-27 09:41:43,317 | INFO     | intersect: -9130018618.803988
[2025-11-27 04:42:22] 2025-11-27 09:41:43,321 | INFO     | chi2: 5.705553854159462
[2025-11-27 04:42:22] 2025-11-27 09:41:43,321 | INFO     | current chi2=5.705553854159462 (change=4.658841196411941 %)
[2025-11-27 04:42:22] 2025-11-27 09:41:43,321 | INFO     | left removable region: 20
[2025-11-27 04:42:22] 2025-11-27 09:41:43,322 | INFO     | sum of square deviations: 121137738636.72246
[2025-11-27 04:42:22] 2025-11-27 09:41:43,332 | INFO     | sum of deviations: 1159082101276.7754
[2025-11-27 04:42:22] 2025-11-27 09:41:43,332 | INFO     | mean x: 1764213190.506156
[2025-11-27 04:42:22] 2025-11-27 09:41:43,332 | INFO     | mean y: 2990452.716826265
[2025-11-27 04:42:22] 2025-11-27 09:41:43,332 | INFO     | intersect: -16877528821.994028
[2025-11-27 04:42:22] 2025-11-27 09:41:43,333 | INFO     | chi2: 0.1500951361165177
[2025-11-27 04:42:22] 2025-11-27 09:41:43,333 | INFO     | current memory leak: 9.57 B/s (using 731 data points, chi2=0.15)
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | could have reported an average CPU frequency of 3280 MHz (29 samples)
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | ..............................
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | . Timing measurements:
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | . get job = 0 s
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | . initial setup = 2 s
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | . payload setup = 17 s
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | . stage-in = 0 s
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | . payload execution = 46771 s
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | . stage-out = 5 s
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | . log creation = 1 s
[2025-11-27 04:42:22] 2025-11-27 09:41:43,334 | INFO     | ..............................
[2025-11-27 04:42:22] 2025-11-27 09:41:43,701 | INFO     | 
[2025-11-27 04:42:22] 2025-11-27 09:41:43,701 | INFO     | job summary report
[2025-11-27 04:42:22] 2025-11-27 09:41:43,701 | INFO     | --------------------------------------------------
[2025-11-27 04:42:22] 2025-11-27 09:41:43,701 | INFO     | PanDA job id: 6897509109
[2025-11-27 04:42:22] 2025-11-27 09:41:43,701 | INFO     | task id: 47556161
[2025-11-27 04:42:22] 2025-11-27 09:41:43,701 | INFO     | errors: (none)
[2025-11-27 04:42:22] 2025-11-27 09:41:43,701 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 04:42:22] 2025-11-27 09:41:43,701 | INFO     | pilot state: finished 
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | transexitcode: 0
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | exeerrorcode: 0
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | exeerrordiag: 
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | exitcode: 0
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | exitmsg: OK
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | cpuconsumptiontime: 199346 s
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | nevents: 1000
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | neventsw: 0
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | pid: 1133179
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | pgrp: 1133179
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | corecount: 8
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | event service: False
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | sizes: {0: 2284094, 1: 2284293, 10: 2284555, 12: 2284583, 46789: 2329670, 46796: 2338664, 46799: 2338848, 46829: 2339094}
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | --------------------------------------------------
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | 
[2025-11-27 04:42:22] 2025-11-27 09:41:43,702 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 04:42:22] 2025-11-27 09:41:43,752 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,752 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,752 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,753 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,754 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 04:42:22] 2025-11-27 09:41:43,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,754 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 04:42:22] 2025-11-27 09:41:43,754 | INFO     | job 6897509109 has completed (purged errors)
[2025-11-27 04:42:22] 2025-11-27 09:41:43,754 | INFO     | overall cleanup function is called
[2025-11-27 04:42:22] 2025-11-27 09:41:44,787 | INFO     | --- collectZombieJob: --- 10, [1133179]
[2025-11-27 04:42:22] 2025-11-27 09:41:44,787 | INFO     | zombie collector waiting for pid 1133179
[2025-11-27 04:42:22] 2025-11-27 09:41:44,787 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 04:42:22] 2025-11-27 09:41:44,787 | INFO     | collected zombie processes
[2025-11-27 04:42:22] 2025-11-27 09:41:44,787 | INFO     | will attempt to kill all subprocesses of pid=1133179
[2025-11-27 04:42:22] 2025-11-27 09:41:46,636 | INFO     | process IDs to be killed: [1133179] (in reverse order)
[2025-11-27 04:42:22] 2025-11-27 09:41:46,903 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 04:42:22] 2025-11-27 09:41:46,903 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 04:42:22] 2025-11-27 09:41:46,958 | INFO     | did not find any defunct processes belonging to 1133179
[2025-11-27 04:42:22] 2025-11-27 09:41:46,976 | INFO     | did not find any defunct processes belonging to 1133179
[2025-11-27 04:42:22] 2025-11-27 09:41:46,982 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 04:42:22] 2025-11-27 09:41:46,982 | INFO     | ready for new job
[2025-11-27 04:42:22] 2025-11-27 09:41:46,982 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 04:42:22] 2025-11-27 09:41:46,987 | INFO     | ***************************************
[2025-11-27 04:42:22] 2025-11-27 09:41:46,987 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 04:42:22] 2025-11-27 09:41:46,987 | INFO     | ***************************************
[2025-11-27 04:42:22] 2025-11-27 09:41:46,987 | INFO     | 
[2025-11-27 04:42:22] 2025-11-27 09:41:46,991 | INFO     | architecture information:
[2025-11-27 04:42:22] 2025-11-27 09:41:46,994 | INFO     | executing command: cat /etc/os-release
[2025-11-27 04:42:22] 2025-11-27 09:41:47,010 | INFO     | cat /etc/os-release:
[2025-11-27 04:42:22] NAME="CentOS Linux"
[2025-11-27 04:42:22] VERSION="7 (Core)"
[2025-11-27 04:42:22] ID="centos"
[2025-11-27 04:42:22] ID_LIKE="rhel fedora"
[2025-11-27 04:42:22] VERSION_ID="7"
[2025-11-27 04:42:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 04:42:22] ANSI_COLOR="0;31"
[2025-11-27 04:42:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 04:42:22] HOME_URL="https://www.centos.org/"
[2025-11-27 04:42:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 04:42:22] 
[2025-11-27 04:42:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 04:42:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 04:42:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 04:42:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 04:42:22] 
[2025-11-27 04:42:22] 2025-11-27 09:41:47,010 | INFO     | ***************************************
[2025-11-27 04:42:22] 2025-11-27 09:41:47,515 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 04:42:22] 2025-11-27 09:41:47,742 | INFO     | sufficient remaining disk space (76416024576 B)
[2025-11-27 04:42:22] 2025-11-27 09:41:47,742 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 04:42:22] 2025-11-27 09:41:47,742 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 04:42:22] 2025-11-27 09:41:47,742 | INFO     | update_server=False
[2025-11-27 04:42:22] 2025-11-27 09:41:47,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 04:42:22] 2025-11-27 09:41:47,813 | INFO     | all data control threads have been joined
[2025-11-27 04:42:22] 2025-11-27 09:41:47,919 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 04:42:22] 2025-11-27 09:41:48,468 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:42:22] 2025-11-27 09:41:48,586 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 04:42:22] 2025-11-27 09:41:48,586 | INFO     | aborting loop
[2025-11-27 04:42:22] 2025-11-27 09:41:48,670 | INFO     | all job control threads have been joined
[2025-11-27 04:42:22] 2025-11-27 09:41:48,748 | INFO     | [job] retrieve thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:48,759 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:48,819 | INFO     | [data] control thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,000 | INFO     | all payload control threads have been joined
[2025-11-27 04:42:22] 2025-11-27 09:41:49,256 | INFO     | [payload] failed_post thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,397 | INFO     | [job] validate thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,484 | INFO     | [data] copytool_in thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,491 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,492 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,509 | INFO     | [job] queue monitor thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,517 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,611 | INFO     | [job] job monitor thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,624 | INFO     | [payload] validate_post thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,676 | INFO     | [job] control thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:49,957 | INFO     | [data] copytool_out thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:50,006 | INFO     | [payload] control thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:41:50,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 04:42:22] 2025-11-27 09:41:54,609 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 04:42:22] 2025-11-27 09:42:14,027 | INFO     | [monitor] cgroup control has ended
[2025-11-27 04:42:22] 2025-11-27 09:42:15,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140332619290432)>', '<ExcThread(monitor, started 140332008204032)>']
[2025-11-27 04:42:22] 2025-11-27 09:42:16,046 | INFO     | PID=1126514 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 04:42:22] 2025-11-27 09:42:16,047 | INFO     | .. there are 42 such processes running
[2025-11-27 04:42:22] 2025-11-27 09:42:16,047 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 04:42:22] 2025-11-27 09:42:16,047 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 04:42:22] 2025-11-27 09:42:16,047 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 04:42:22] 2025-11-27 09:42:16,048 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 04:42:22] 2025-11-27 09:42:16,048 | INFO     | [monitor] control thread has ended
[2025-11-27 04:42:22] 2025-11-27 09:42:20,548 | INFO     | all workflow threads have been joined
[2025-11-27 04:42:22] 2025-11-27 09:42:20,548 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 04:42:22] 2025-11-27 09:42:20,548 | INFO     | traces error code: 0
[2025-11-27 04:42:22] 2025-11-27 09:42:20,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 04:42:22] 2025-11-27 09:42:21,124 [wrapper] ==== pilot stdout END ====
[2025-11-27 04:42:22] 2025-11-27 09:42:21,145 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 04:42:22] 2025-11-27 09:42:21,173 [wrapper] pilotpid: 1126514
[2025-11-27 04:42:22] 2025-11-27 09:42:21,178 [wrapper] Pilot exit status: 0
[2025-11-27 04:42:22] 2025-11-27 09:42:21,350 [wrapper] pandaids: 6897509109
[2025-11-27 04:42:22] 2025-11-27 09:42:21,649 [wrapper] cleanup supervisor_pilot  617565 1126515
[2025-11-27 04:42:22] 2025-11-27 09:42:21,654 [wrapper] Test setup, not cleaning
[2025-11-27 04:42:22] 2025-11-27 09:42:21,657 [wrapper] apfmon messages muted
[2025-11-27 04:42:22] 2025-11-27 09:42:21,670 [wrapper] ==== wrapper stdout END ====
[2025-11-27 04:42:22] 2025-11-27 09:42:21,672 [wrapper] ==== wrapper stderr END ====
[2025-11-27 04:42:22]  *** Error codes and diagnostics ***
[2025-11-27 04:42:22]     "exeErrorCode": 0,
[2025-11-27 04:42:22]     "exeErrorDiag": "",
[2025-11-27 04:42:22]     "pilotErrorCode": 0,
[2025-11-27 04:42:22]     "pilotErrorDiag": "",
[2025-11-27 04:42:22]  *** Listing of results directory ***
[2025-11-27 04:42:22] total 1326968
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 04:42:22] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas       100 Nov 26 15:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 04:42:22] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 15:40 run_atlas
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas       105 Nov 26 15:40 job.xml
[2025-11-27 04:42:22] -rw-r--r--. 2 boincer umatlas 412091804 Nov 26 15:40 EVNT.47483658._002286.pool.root.1
[2025-11-27 04:42:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 15:40 start_atlas.sh
[2025-11-27 04:42:22] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 15:40 shared
[2025-11-27 04:42:22] -rw-r--r--. 2 boincer umatlas    590111 Nov 26 15:40 input.tar.gz
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas         0 Nov 26 15:40 boinc_lockfile
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 15:40 pandaJob.out
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas        57 Nov 26 15:40 setup.sh.local
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas    991538 Nov 26 15:40 agis_schedconf.cvmfs.json
[2025-11-27 04:42:22] drwx------. 5 boincer umatlas      4096 Nov 26 15:40 pilot3
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas       533 Nov 27 04:23 boinc_task_state.xml
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas      6904 Nov 27 04:38 init_data.xml
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas 927011295 Nov 27 04:39 HITS.47556161._002698.pool.root.1
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas      1057 Nov 27 04:41 memory_monitor_summary.json
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas   1516240 Nov 27 04:41 agis_ddmendpoints.agis.ALL.json
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas   1961737 Nov 27 04:41 log.47556161._002698.job.log.tgz.1
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas      7926 Nov 27 04:41 heartbeat.json
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas        95 Nov 27 04:42 pilot_heartbeat.json
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 04:42 boinc_mmap_file
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas        29 Nov 27 04:42 wrapper_checkpoint.txt
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas      4824 Nov 27 04:42 pilotlog.txt
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas   5935154 Nov 27 04:42 log.47556161._002698.job.log.1
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas       353 Nov 27 04:42 output.list
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas       620 Nov 27 04:42 runtime_log
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas   7915520 Nov 27 04:42 result.tar.gz
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas      9343 Nov 27 04:42 runtime_log.err
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas       663 Nov 27 04:42 MwiLDm6aBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmWaMKDmpgscFn.diag
[2025-11-27 04:42:22] -rw-r--r--. 1 boincer umatlas     21135 Nov 27 04:42 stderr.txt
[2025-11-27 04:42:22] HITS file was successfully produced:
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas 927011295 Nov 27 04:39 shared/HITS.pool.root.1
[2025-11-27 04:42:22]  *** Contents of shared directory: ***
[2025-11-27 04:42:22] total 1316056
[2025-11-27 04:42:22] -rw-r--r--. 2 boincer umatlas 412091804 Nov 26 15:40 ATLAS.root_0
[2025-11-27 04:42:22] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 15:40 start_atlas.sh
[2025-11-27 04:42:22] -rw-r--r--. 2 boincer umatlas    590111 Nov 26 15:40 input.tar.gz
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas 927011295 Nov 27 04:39 HITS.pool.root.1
[2025-11-27 04:42:22] -rw-------. 1 boincer umatlas   7915520 Nov 27 04:42 result.tar.gz
04:42:24 (1122062): run_atlas exited; CPU time 199859.747642
04:42:24 (1122062): called boinc_finish(0)

</stderr_txt>
]]>

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