Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:47:57 (2562741): wrapper (7.7.26015): starting
13:47:57 (2562741): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 13:47:57] Arguments: --nthreads 8
[2025-11-26 13:47:57] Threads: 8
[2025-11-26 13:47:57] Checking for CVMFS
[2025-11-26 13:47:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:47:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:47:58] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:47:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:47:58] 2.13.3.0 12388 30383 237684 153331 1 626 21751434 32935936 34264 16776704 0 123822834 99.491 147497545 36307 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 13:47:58] CVMFS is ok
[2025-11-26 13:47:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:47:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:47:58] Further information can be found at the LHC@home message board.
[2025-11-26 13:47:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:47:58] Checking for apptainer binary...
[2025-11-26 13:47:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:47:58] Running /usr/bin/apptainer --version
[2025-11-26 13:47:58] apptainer version 1.4.4-1.el9
[2025-11-26 13:47:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:47:59] c7-4-31.aglt2.org
[2025-11-26 13:47:59] apptainer works
[2025-11-26 13:47:59] Set ATHENA_PROC_NUMBER=8
[2025-11-26 13:47:59] Set ATHENA_CORE_NUMBER=8
[2025-11-26 13:47:59] Starting ATLAS job with PandaID=6895325315
[2025-11-26 13:47:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 02:08:47]  *** The last 200 lines of the pilot log: ***
[2025-11-27 02:08:48] 2025-11-27 07:07:50,757 | INFO     | .. there are 47 such processes running
[2025-11-27 02:08:48] 2025-11-27 07:07:51,759 | INFO     | time since job start (44368s) is within the limit (172800.0s)
[2025-11-27 02:08:48] 2025-11-27 07:07:51,759 | INFO     | 44372s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 02:08:48] 2025-11-27 07:07:51,989 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 02:08:48] 2025-11-27 07:07:51,994 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3065.967843749999
[2025-11-27 02:08:48] 2025-11-27 07:07:52,010 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6895325315/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 02:08:48] 2025-11-27 07:07:52,010 | INFO     | extracted standard info from prmon json
[2025-11-27 02:08:48] 2025-11-27 07:07:52,011 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 02:08:48] 2025-11-27 07:07:52,011 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 02:08:48] 2025-11-27 07:07:52,042 | INFO     | fitting pss+swap vs Time
[2025-11-27 02:08:48] 2025-11-27 07:07:52,057 | INFO     | sum of square deviations: 119153786007.3407
[2025-11-27 02:08:48] 2025-11-27 07:07:52,082 | INFO     | sum of deviations: 1063189260533.8167
[2025-11-27 02:08:48] 2025-11-27 07:07:52,083 | INFO     | mean x: 1764205094.7111416
[2025-11-27 02:08:48] 2025-11-27 07:07:52,083 | INFO     | mean y: 2875401.3562585968
[2025-11-27 02:08:48] 2025-11-27 07:07:52,083 | INFO     | intersect: -15738830950.805943
[2025-11-27 02:08:48] 2025-11-27 07:07:52,096 | INFO     | chi2: 7.7146745210138965
[2025-11-27 02:08:48] 2025-11-27 07:07:52,097 | INFO     | sum of square deviations: 116712714985.09837
[2025-11-27 02:08:48] 2025-11-27 07:07:52,141 | INFO     | sum of deviations: 1325403045986.7456
[2025-11-27 02:08:48] 2025-11-27 07:07:52,141 | INFO     | mean x: 1764204942.2229917
[2025-11-27 02:08:48] 2025-11-27 07:07:52,141 | INFO     | mean y: 2891782.858725762
[2025-11-27 02:08:48] 2025-11-27 07:07:52,141 | INFO     | intersect: -20031622918.18109
[2025-11-27 02:08:48] 2025-11-27 07:07:52,142 | INFO     | chi2: 4.1295051782566645
[2025-11-27 02:08:48] 2025-11-27 07:07:52,155 | INFO     | current chi2=4.1295051782566645 (change=46.472075172991914 %)
[2025-11-27 02:08:48] 2025-11-27 07:07:52,156 | INFO     | sum of square deviations: 114304829983.76855
[2025-11-27 02:08:48] 2025-11-27 07:07:52,189 | INFO     | sum of deviations: 1353635782648.6895
[2025-11-27 02:08:48] 2025-11-27 07:07:52,189 | INFO     | mean x: 1764204789.7224548
[2025-11-27 02:08:48] 2025-11-27 07:07:52,189 | INFO     | mean y: 2893561.19944212
[2025-11-27 02:08:48] 2025-11-27 07:07:52,189 | INFO     | intersect: -20889405842.313374
[2025-11-27 02:08:48] 2025-11-27 07:07:52,190 | INFO     | chi2: 3.92953379013611
[2025-11-27 02:08:48] 2025-11-27 07:07:52,190 | INFO     | current chi2=3.92953379013611 (change=4.842502418291567 %)
[2025-11-27 02:08:48] 2025-11-27 07:07:52,190 | INFO     | right removable region: 716
[2025-11-27 02:08:48] 2025-11-27 07:07:52,191 | INFO     | sum of square deviations: 116711956145.09833
[2025-11-27 02:08:48] 2025-11-27 07:07:52,235 | INFO     | sum of deviations: 798742914857.3961
[2025-11-27 02:08:48] 2025-11-27 07:07:52,235 | INFO     | mean x: 1764205247.2229917
[2025-11-27 02:08:48] 2025-11-27 07:07:52,235 | INFO     | mean y: 2891911.0844875346
[2025-11-27 02:08:48] 2025-11-27 07:07:52,235 | INFO     | intersect: -12070819198.870094
[2025-11-27 02:08:48] 2025-11-27 07:07:52,236 | INFO     | chi2: 4.293764615139618
[2025-11-27 02:08:48] 2025-11-27 07:07:52,236 | INFO     | current chi2=4.293764615139618 (change=44.34289348897493 %)
[2025-11-27 02:08:48] 2025-11-27 07:07:52,237 | INFO     | sum of square deviations: 114303796274.58583
[2025-11-27 02:08:48] 2025-11-27 07:07:52,297 | INFO     | sum of deviations: 729690256531.1428
[2025-11-27 02:08:48] 2025-11-27 07:07:52,297 | INFO     | mean x: 1764205399.7322176
[2025-11-27 02:08:48] 2025-11-27 07:07:52,297 | INFO     | mean y: 2896275.011157601
[2025-11-27 02:08:48] 2025-11-27 07:07:52,298 | INFO     | intersect: -11259402377.010525
[2025-11-27 02:08:48] 2025-11-27 07:07:52,298 | INFO     | chi2: 4.035008952028139
[2025-11-27 02:08:48] 2025-11-27 07:07:52,298 | INFO     | current chi2=4.035008952028139 (change=6.0263122528682125 %)
[2025-11-27 02:08:48] 2025-11-27 07:07:52,298 | INFO     | left removable region: 20
[2025-11-27 02:08:48] 2025-11-27 07:07:52,299 | INFO     | sum of square deviations: 104552424998.99861
[2025-11-27 02:08:48] 2025-11-27 07:07:52,390 | INFO     | sum of deviations: 950026132027.908
[2025-11-27 02:08:48] 2025-11-27 07:07:52,390 | INFO     | mean x: 1764205369.2514367
[2025-11-27 02:08:48] 2025-11-27 07:07:52,390 | INFO     | mean y: 2919363.091954023
[2025-11-27 02:08:48] 2025-11-27 07:07:52,391 | INFO     | intersect: -16027710276.238384
[2025-11-27 02:08:48] 2025-11-27 07:07:52,416 | INFO     | chi2: 0.17300075408722496
[2025-11-27 02:08:48] 2025-11-27 07:07:52,416 | INFO     | current memory leak: 9.09 B/s (using 696 data points, chi2=0.17)
[2025-11-27 02:08:48] 2025-11-27 07:07:52,417 | INFO     | could have reported an average CPU frequency of 3108 MHz (28 samples)
[2025-11-27 02:08:48] 2025-11-27 07:07:52,417 | INFO     | ..............................
[2025-11-27 02:08:48] 2025-11-27 07:07:52,417 | INFO     | . Timing measurements:
[2025-11-27 02:08:48] 2025-11-27 07:07:52,417 | INFO     | . get job = 0 s
[2025-11-27 02:08:48] 2025-11-27 07:07:52,417 | INFO     | . initial setup = 4 s
[2025-11-27 02:08:48] 2025-11-27 07:07:52,417 | INFO     | . payload setup = 12 s
[2025-11-27 02:08:48] 2025-11-27 07:07:52,417 | INFO     | . stage-in = 0 s
[2025-11-27 02:08:48] 2025-11-27 07:07:52,418 | INFO     | . payload execution = 44298 s
[2025-11-27 02:08:48] 2025-11-27 07:07:52,418 | INFO     | . stage-out = 6 s
[2025-11-27 02:08:48] 2025-11-27 07:07:52,418 | INFO     | . log creation = 1 s
[2025-11-27 02:08:48] 2025-11-27 07:07:52,418 | INFO     | ..............................
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | 
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | job summary report
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | --------------------------------------------------
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | PanDA job id: 6895325315
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | task id: 47556137
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | errors: (none)
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | pilot state: finished 
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | transexitcode: 0
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | exeerrorcode: 0
[2025-11-27 02:08:48] 2025-11-27 07:07:52,829 | INFO     | exeerrordiag: 
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | exitcode: 0
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | exitmsg: OK
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | cpuconsumptiontime: 199383 s
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | nevents: 1000
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | neventsw: 0
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | pid: 2573867
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | pgrp: 2573867
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | corecount: 8
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | event service: False
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | sizes: {0: 2284140, 1: 2284339, 9: 2284601, 11: 2284629, 44316: 2330254, 44324: 2339460, 44347: 2339650}
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | --------------------------------------------------
[2025-11-27 02:08:48] 2025-11-27 07:07:52,830 | INFO     | 
[2025-11-27 02:08:48] 2025-11-27 07:07:52,831 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-27 02:08:48] 2025-11-27 07:07:52,905 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,905 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,905 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,905 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,906 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,907 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,907 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,907 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 02:08:48] 2025-11-27 07:07:52,907 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,907 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 02:08:48] 2025-11-27 07:07:52,907 | INFO     | job 6895325315 has completed (purged errors)
[2025-11-27 02:08:48] 2025-11-27 07:07:52,907 | INFO     | overall cleanup function is called
[2025-11-27 02:08:48] 2025-11-27 07:07:53,941 | INFO     | --- collectZombieJob: --- 10, [2573867]
[2025-11-27 02:08:48] 2025-11-27 07:07:53,942 | INFO     | zombie collector waiting for pid 2573867
[2025-11-27 02:08:48] 2025-11-27 07:07:53,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 02:08:48] 2025-11-27 07:07:53,942 | INFO     | collected zombie processes
[2025-11-27 02:08:48] 2025-11-27 07:07:53,942 | INFO     | will attempt to kill all subprocesses of pid=2573867
[2025-11-27 02:08:48] 2025-11-27 07:07:55,461 | INFO     | process IDs to be killed: [2573867] (in reverse order)
[2025-11-27 02:08:48] 2025-11-27 07:07:55,774 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 02:08:48] 2025-11-27 07:07:55,777 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 02:08:48] 2025-11-27 07:07:55,838 | INFO     | did not find any defunct processes belonging to 2573867
[2025-11-27 02:08:48] 2025-11-27 07:07:55,928 | INFO     | did not find any defunct processes belonging to 2573867
[2025-11-27 02:08:48] 2025-11-27 07:07:55,934 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 02:08:48] 2025-11-27 07:07:55,934 | INFO     | ready for new job
[2025-11-27 02:08:48] 2025-11-27 07:07:55,934 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 02:08:48] 2025-11-27 07:07:55,942 | INFO     | ***************************************
[2025-11-27 02:08:48] 2025-11-27 07:07:55,942 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 02:08:48] 2025-11-27 07:07:55,943 | INFO     | ***************************************
[2025-11-27 02:08:48] 2025-11-27 07:07:55,943 | INFO     | 
[2025-11-27 02:08:48] 2025-11-27 07:07:55,952 | INFO     | architecture information:
[2025-11-27 02:08:48] 2025-11-27 07:07:55,957 | INFO     | executing command: cat /etc/os-release
[2025-11-27 02:08:48] 2025-11-27 07:07:56,062 | INFO     | cat /etc/os-release:
[2025-11-27 02:08:48] NAME="CentOS Linux"
[2025-11-27 02:08:48] VERSION="7 (Core)"
[2025-11-27 02:08:48] ID="centos"
[2025-11-27 02:08:48] ID_LIKE="rhel fedora"
[2025-11-27 02:08:48] VERSION_ID="7"
[2025-11-27 02:08:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 02:08:48] ANSI_COLOR="0;31"
[2025-11-27 02:08:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 02:08:48] HOME_URL="https://www.centos.org/"
[2025-11-27 02:08:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 02:08:48] 
[2025-11-27 02:08:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 02:08:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 02:08:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 02:08:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 02:08:48] 
[2025-11-27 02:08:48] 2025-11-27 07:07:56,062 | INFO     | ***************************************
[2025-11-27 02:08:48] 2025-11-27 07:07:56,567 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-27 02:08:48] 2025-11-27 07:07:56,649 | INFO     | sufficient remaining disk space (66780659712 B)
[2025-11-27 02:08:48] 2025-11-27 07:07:56,649 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 02:08:48] 2025-11-27 07:07:56,649 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 02:08:48] 2025-11-27 07:07:56,649 | INFO     | update_server=False
[2025-11-27 02:08:48] 2025-11-27 07:07:56,650 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 02:08:48] 2025-11-27 07:07:56,715 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:08:48] 2025-11-27 07:07:56,716 | INFO     | aborting loop
[2025-11-27 02:08:48] 2025-11-27 07:07:57,198 | INFO     | all data control threads have been joined
[2025-11-27 02:08:48] 2025-11-27 07:07:57,285 | INFO     | all payload control threads have been joined
[2025-11-27 02:08:48] 2025-11-27 07:07:57,646 | INFO     | all job control threads have been joined
[2025-11-27 02:08:48] 2025-11-27 07:07:57,656 | INFO     | [job] retrieve thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:57,681 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:57,722 | INFO     | [job] job monitor thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:57,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 02:08:48] 2025-11-27 07:07:57,852 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:57,972 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 02:08:48] 2025-11-27 07:07:58,002 | INFO     | [data] copytool_in thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:58,107 | INFO     | [payload] failed_post thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:58,205 | INFO     | [data] control thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:58,291 | INFO     | [payload] control thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:58,344 | INFO     | [job] validate thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:58,652 | INFO     | [job] control thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:58,857 | INFO     | [job] queue monitor thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:58,894 | INFO     | [payload] validate_post thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:58,982 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:58,983 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:07:59,184 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 02:08:48] 2025-11-27 07:07:59,979 | INFO     | [data] copytool_out thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:08:03,201 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 02:08:48] 2025-11-27 07:08:26,469 | INFO     | PID=2566552 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 02:08:48] 2025-11-27 07:08:26,469 | INFO     | .. there are 47 such processes running
[2025-11-27 02:08:48] 2025-11-27 07:08:26,471 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 02:08:48] 2025-11-27 07:08:26,471 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 02:08:48] 2025-11-27 07:08:26,471 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 02:08:48] 2025-11-27 07:08:40,787 | INFO     | [monitor] cgroup control has ended
[2025-11-27 02:08:48] 2025-11-27 07:08:41,266 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139746957514560)>', '<ExcThread(monitor, started 139746592405248)>']
[2025-11-27 02:08:48] 2025-11-27 07:08:41,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 02:08:48] 2025-11-27 07:08:41,576 | INFO     | [monitor] control thread has ended
[2025-11-27 02:08:48] 2025-11-27 07:08:46,291 | INFO     | all workflow threads have been joined
[2025-11-27 02:08:48] 2025-11-27 07:08:46,292 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 02:08:48] 2025-11-27 07:08:46,292 | INFO     | traces error code: 0
[2025-11-27 02:08:48] 2025-11-27 07:08:46,292 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 02:08:48] 2025-11-27 07:08:46,815 [wrapper] ==== pilot stdout END ====
[2025-11-27 02:08:48] 2025-11-27 07:08:46,832 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 02:08:48] 2025-11-27 07:08:46,868 [wrapper] pilotpid: 2566552
[2025-11-27 02:08:48] 2025-11-27 07:08:46,888 [wrapper] Pilot exit status: 0
[2025-11-27 02:08:48] 2025-11-27 07:08:46,970 [wrapper] pandaids: 6895325315
[2025-11-27 02:08:48] 2025-11-27 07:08:47,202 [wrapper] cleanup supervisor_pilot 2386820 2566553
[2025-11-27 02:08:48] 2025-11-27 07:08:47,220 [wrapper] Test setup, not cleaning
[2025-11-27 02:08:48] 2025-11-27 07:08:47,240 [wrapper] apfmon messages muted
[2025-11-27 02:08:48] 2025-11-27 07:08:47,255 [wrapper] ==== wrapper stdout END ====
[2025-11-27 02:08:48] 2025-11-27 07:08:47,283 [wrapper] ==== wrapper stderr END ====
[2025-11-27 02:08:48]  *** Error codes and diagnostics ***
[2025-11-27 02:08:48]     "exeErrorCode": 0,
[2025-11-27 02:08:48]     "exeErrorDiag": "",
[2025-11-27 02:08:48]     "pilotErrorCode": 0,
[2025-11-27 02:08:48]     "pilotErrorDiag": "",
[2025-11-27 02:08:48]  *** Listing of results directory ***
[2025-11-27 02:08:48] total 1309404
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas    576529 Nov 21 09:24 pilot3.tar.gz
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas      5112 Nov 21 09:40 queuedata.json
[2025-11-27 02:08:48] -rwx------. 1 boincer umatlas     36292 Nov 21 09:43 runpilot2-wrapper.sh
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas       100 Nov 26 13:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 02:08:48] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 13:47 run_atlas
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas       105 Nov 26 13:47 job.xml
[2025-11-27 02:08:48] -rw-r--r--. 2 boincer umatlas 408498985 Nov 26 13:47 EVNT.47483658._000031.pool.root.1
[2025-11-27 02:08:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 13:47 start_atlas.sh
[2025-11-27 02:08:48] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 13:47 shared
[2025-11-27 02:08:48] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 13:47 input.tar.gz
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas         0 Nov 26 13:47 boinc_lockfile
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas      2784 Nov 26 13:47 pandaJob.out
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas        57 Nov 26 13:47 setup.sh.local
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas    991522 Nov 26 13:48 agis_schedconf.cvmfs.json
[2025-11-27 02:08:48] drwx------. 5 boincer umatlas      4096 Nov 26 13:48 pilot3
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas       532 Nov 27 01:59 boinc_task_state.xml
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas      6946 Nov 27 02:02 init_data.xml
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas 913388370 Nov 27 02:06 HITS.47556137._000307.pool.root.1
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas      1070 Nov 27 02:07 memory_monitor_summary.json
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas   1516240 Nov 27 02:07 agis_ddmendpoints.agis.ALL.json
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas   1926902 Nov 27 02:07 log.47556137._000307.job.log.tgz.1
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas      8626 Nov 27 02:07 heartbeat.json
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas        95 Nov 27 02:08 pilot_heartbeat.json
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 02:08 boinc_mmap_file
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas        29 Nov 27 02:08 wrapper_checkpoint.txt
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas      4824 Nov 27 02:08 pilotlog.txt
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas   5581956 Nov 27 02:08 log.47556137._000307.job.log.1
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas       353 Nov 27 02:08 output.list
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas       620 Nov 27 02:08 runtime_log
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas   7526400 Nov 27 02:08 result.tar.gz
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas       663 Nov 27 02:08 uhHKDmvWhg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxUJKDmO1CDFm.diag
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 02:08 runtime_log.err
[2025-11-27 02:08:48] -rw-r--r--. 1 boincer umatlas     21306 Nov 27 02:08 stderr.txt
[2025-11-27 02:08:48] HITS file was successfully produced:
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas 913388370 Nov 27 02:06 shared/HITS.pool.root.1
[2025-11-27 02:08:48]  *** Contents of shared directory: ***
[2025-11-27 02:08:48] total 1298868
[2025-11-27 02:08:48] -rw-r--r--. 2 boincer umatlas 408498985 Nov 26 13:47 ATLAS.root_0
[2025-11-27 02:08:48] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 13:47 start_atlas.sh
[2025-11-27 02:08:48] -rw-r--r--. 2 boincer umatlas    590103 Nov 26 13:47 input.tar.gz
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas 913388370 Nov 27 02:06 HITS.pool.root.1
[2025-11-27 02:08:48] -rw-------. 1 boincer umatlas   7526400 Nov 27 02:08 result.tar.gz
02:08:50 (2562741): run_atlas exited; CPU time 200542.208301
02:08:50 (2562741): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN