Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:08:28 (35518): wrapper (7.7.26015): starting
13:08:28 (35518): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 13:08:28] Arguments: --nthreads 8
[2025-11-26 13:08:28] Threads: 8
[2025-11-26 13:08:28] Checking for CVMFS
[2025-11-26 13:08:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:08:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:08:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:08:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:08:29] 2.11.2.0 13817 545699 298060 153330 2 90 13504223 18432001 2619 130560 8 260732595 99.607 266420899 24622 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.237:6081 1
[2025-11-26 13:08:29] CVMFS is ok
[2025-11-26 13:08:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:08:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:08:29] Further information can be found at the LHC@home message board.
[2025-11-26 13:08:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:08:29] Checking for apptainer binary...
[2025-11-26 13:08:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:08:29] Running /usr/bin/apptainer --version
[2025-11-26 13:08:29] apptainer version 1.3.2-1.el7
[2025-11-26 13:08:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:08:29] c-9-29.aglt2.org
[2025-11-26 13:08:29] apptainer works
[2025-11-26 13:08:29] Set ATHENA_PROC_NUMBER=8
[2025-11-26 13:08:29] Set ATHENA_CORE_NUMBER=8
[2025-11-26 13:08:29] Starting ATLAS job with PandaID=6893859013
[2025-11-26 13:08:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:28:31]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:28:31] 2025-11-27 11:27:38,519 | INFO     | monitor loop #4376: job 0:6893859013 is in state 'finished'
[2025-11-27 06:28:31] 2025-11-27 11:27:38,519 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:28:31] 2025-11-27 11:27:38,762 | INFO     | time since job start (62338s) is within the limit (172800.0s)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,020 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 06:28:31] 2025-11-27 11:27:39,025 | INFO     | found 16 cores (8 cores per socket, 2 sockets) HT, CPU MHz: 2999.946625000001
[2025-11-27 06:28:31] 2025-11-27 11:27:39,028 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893859013/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,029 | INFO     | extracted standard info from prmon json
[2025-11-27 06:28:31] 2025-11-27 11:27:39,029 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:28:31] 2025-11-27 11:27:39,029 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:28:31] 2025-11-27 11:27:39,042 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:28:31] 2025-11-27 11:27:39,043 | INFO     | sum of square deviations: 331002180899.46405
[2025-11-27 06:28:31] 2025-11-27 11:27:39,059 | INFO     | sum of deviations: 1809487013557.5894
[2025-11-27 06:28:31] 2025-11-27 11:27:39,059 | INFO     | mean x: 1764211685.1272016
[2025-11-27 06:28:31] 2025-11-27 11:27:39,059 | INFO     | mean y: 2862806.9031311153
[2025-11-27 06:28:31] 2025-11-27 11:27:39,059 | INFO     | intersect: -9641539307.69753
[2025-11-27 06:28:31] 2025-11-27 11:27:39,060 | INFO     | chi2: 5.3160649255116645
[2025-11-27 06:28:31] 2025-11-27 11:27:39,061 | INFO     | sum of square deviations: 326167950874.9882
[2025-11-27 06:28:31] 2025-11-27 11:27:39,077 | INFO     | sum of deviations: 2107296019007.5078
[2025-11-27 06:28:31] 2025-11-27 11:27:39,077 | INFO     | mean x: 1764211532.6302853
[2025-11-27 06:28:31] 2025-11-27 11:27:39,077 | INFO     | mean y: 2872193.581120944
[2025-11-27 06:28:31] 2025-11-27 11:27:39,077 | INFO     | intersect: -11395292247.240469
[2025-11-27 06:28:31] 2025-11-27 11:27:39,078 | INFO     | chi2: 2.6689918089212723
[2025-11-27 06:28:31] 2025-11-27 11:27:39,078 | INFO     | current chi2=2.6689918089212723 (change=49.793844764520344 %)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,079 | INFO     | sum of square deviations: 321381024062.9908
[2025-11-27 06:28:31] 2025-11-27 11:27:39,094 | INFO     | sum of deviations: 2220810776225.0454
[2025-11-27 06:28:31] 2025-11-27 11:27:39,094 | INFO     | mean x: 1764211380.1333992
[2025-11-27 06:28:31] 2025-11-27 11:27:39,095 | INFO     | mean y: 2875806.3033596836
[2025-11-27 06:28:31] 2025-11-27 11:27:39,095 | INFO     | intersect: -12188197565.132496
[2025-11-27 06:28:31] 2025-11-27 11:27:39,095 | INFO     | chi2: 2.165758416260388
[2025-11-27 06:28:31] 2025-11-27 11:27:39,095 | INFO     | current chi2=2.165758416260388 (change=18.854812179595136 %)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,096 | INFO     | right removable region: 1011
[2025-11-27 06:28:31] 2025-11-27 11:27:39,096 | INFO     | sum of square deviations: 326167559864.9885
[2025-11-27 06:28:31] 2025-11-27 11:27:39,112 | INFO     | sum of deviations: 1573849125294.3782
[2025-11-27 06:28:31] 2025-11-27 11:27:39,112 | INFO     | mean x: 1764211837.6302853
[2025-11-27 06:28:31] 2025-11-27 11:27:39,112 | INFO     | mean y: 2870228.208456244
[2025-11-27 06:28:31] 2025-11-27 11:27:39,112 | INFO     | intersect: -8509942200.586545
[2025-11-27 06:28:31] 2025-11-27 11:27:39,113 | INFO     | chi2: 3.552335190655711
[2025-11-27 06:28:31] 2025-11-27 11:27:39,113 | INFO     | current chi2=3.552335190655711 (change=33.17735504681025 %)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,114 | INFO     | sum of square deviations: 321380365751.5207
[2025-11-27 06:28:31] 2025-11-27 11:27:39,130 | INFO     | sum of deviations: 1496830988095.187
[2025-11-27 06:28:31] 2025-11-27 11:27:39,130 | INFO     | mean x: 1764211990.131423
[2025-11-27 06:28:31] 2025-11-27 11:27:39,130 | INFO     | mean y: 2872681.509881423
[2025-11-27 06:28:31] 2025-11-27 11:27:39,130 | INFO     | intersect: -8213955282.521706
[2025-11-27 06:28:31] 2025-11-27 11:27:39,131 | INFO     | chi2: 3.4776375233932377
[2025-11-27 06:28:31] 2025-11-27 11:27:39,131 | INFO     | current chi2=3.4776375233932377 (change=2.1027764344694386 %)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,131 | INFO     | left removable region: 20
[2025-11-27 06:28:31] 2025-11-27 11:27:39,132 | INFO     | sum of square deviations: 301786098732.39343
[2025-11-27 06:28:31] 2025-11-27 11:27:39,154 | INFO     | sum of deviations: 1787522959399.2075
[2025-11-27 06:28:31] 2025-11-27 11:27:39,155 | INFO     | mean x: 1764211959.6397579
[2025-11-27 06:28:31] 2025-11-27 11:27:39,155 | INFO     | mean y: 2890324.370332997
[2025-11-27 06:28:31] 2025-11-27 11:27:39,155 | INFO     | intersect: -10446793727.840235
[2025-11-27 06:28:31] 2025-11-27 11:27:39,156 | INFO     | chi2: 0.22714824327657174
[2025-11-27 06:28:31] 2025-11-27 11:27:39,157 | INFO     | current memory leak: 5.92 B/s (using 991 data points, chi2=0.23)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,158 | INFO     | could have reported an average CPU frequency of 2999 MHz (37 samples)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,158 | INFO     | ..............................
[2025-11-27 06:28:31] 2025-11-27 11:27:39,158 | INFO     | . Timing measurements:
[2025-11-27 06:28:31] 2025-11-27 11:27:39,158 | INFO     | . get job = 0 s
[2025-11-27 06:28:31] 2025-11-27 11:27:39,158 | INFO     | . initial setup = 2 s
[2025-11-27 06:28:31] 2025-11-27 11:27:39,159 | INFO     | . payload setup = 4 s
[2025-11-27 06:28:31] 2025-11-27 11:27:39,159 | INFO     | . stage-in = 0 s
[2025-11-27 06:28:31] 2025-11-27 11:27:39,159 | INFO     | . payload execution = 62307 s
[2025-11-27 06:28:31] 2025-11-27 11:27:39,159 | INFO     | . stage-out = 3 s
[2025-11-27 06:28:31] 2025-11-27 11:27:39,159 | INFO     | . log creation = 0 s
[2025-11-27 06:28:31] 2025-11-27 11:27:39,159 | INFO     | ..............................
[2025-11-27 06:28:31] 2025-11-27 11:27:39,702 | INFO     | 
[2025-11-27 06:28:31] 2025-11-27 11:27:39,702 | INFO     | job summary report
[2025-11-27 06:28:31] 2025-11-27 11:27:39,702 | INFO     | --------------------------------------------------
[2025-11-27 06:28:31] 2025-11-27 11:27:39,702 | INFO     | PanDA job id: 6893859013
[2025-11-27 06:28:31] 2025-11-27 11:27:39,702 | INFO     | task id: 47523449
[2025-11-27 06:28:31] 2025-11-27 11:27:39,703 | INFO     | errors: (none)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,703 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:28:31] 2025-11-27 11:27:39,703 | INFO     | pilot state: finished 
[2025-11-27 06:28:31] 2025-11-27 11:27:39,703 | INFO     | transexitcode: 0
[2025-11-27 06:28:31] 2025-11-27 11:27:39,703 | INFO     | exeerrorcode: 0
[2025-11-27 06:28:31] 2025-11-27 11:27:39,703 | INFO     | exeerrordiag: 
[2025-11-27 06:28:31] 2025-11-27 11:27:39,703 | INFO     | exitcode: 0
[2025-11-27 06:28:31] 2025-11-27 11:27:39,704 | INFO     | exitmsg: OK
[2025-11-27 06:28:31] 2025-11-27 11:27:39,704 | INFO     | cpuconsumptiontime: 481389 s
[2025-11-27 06:28:31] 2025-11-27 11:27:39,704 | INFO     | nevents: 1000
[2025-11-27 06:28:31] 2025-11-27 11:27:39,704 | INFO     | neventsw: 0
[2025-11-27 06:28:31] 2025-11-27 11:27:39,704 | INFO     | pid: 46815
[2025-11-27 06:28:31] 2025-11-27 11:27:39,704 | INFO     | pgrp: 46815
[2025-11-27 06:28:31] 2025-11-27 11:27:39,705 | INFO     | corecount: 8
[2025-11-27 06:28:31] 2025-11-27 11:27:39,705 | INFO     | event service: False
[2025-11-27 06:28:31] 2025-11-27 11:27:39,705 | INFO     | sizes: {0: 2284315, 4: 2284577, 11: 2284605, 62316: 2337459, 62319: 2346453, 62321: 2346509, 62325: 2346883}
[2025-11-27 06:28:31] 2025-11-27 11:27:39,705 | INFO     | --------------------------------------------------
[2025-11-27 06:28:31] 2025-11-27 11:27:39,705 | INFO     | 
[2025-11-27 06:28:31] 2025-11-27 11:27:39,705 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-27 06:28:31] 2025-11-27 11:27:39,727 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,727 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,727 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,727 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,727 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,728 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,728 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,728 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,728 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,728 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,728 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,729 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,729 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,729 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,729 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,729 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,729 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,730 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,730 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,730 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:28:31] 2025-11-27 11:27:39,730 | INFO     | job 6893859013 has completed (purged errors)
[2025-11-27 06:28:31] 2025-11-27 11:27:39,730 | INFO     | overall cleanup function is called
[2025-11-27 06:28:31] 2025-11-27 11:27:40,744 | INFO     | --- collectZombieJob: --- 10, [46815]
[2025-11-27 06:28:31] 2025-11-27 11:27:40,744 | INFO     | zombie collector waiting for pid 46815
[2025-11-27 06:28:31] 2025-11-27 11:27:40,745 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:28:31] 2025-11-27 11:27:40,745 | INFO     | collected zombie processes
[2025-11-27 06:28:31] 2025-11-27 11:27:40,745 | INFO     | will attempt to kill all subprocesses of pid=46815
[2025-11-27 06:28:31] 2025-11-27 11:27:40,900 | INFO     | process IDs to be killed: [46815] (in reverse order)
[2025-11-27 06:28:31] 2025-11-27 11:27:40,946 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:28:31] 2025-11-27 11:27:40,947 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:28:31] 2025-11-27 11:27:40,950 | INFO     | did not find any defunct processes belonging to 46815
[2025-11-27 06:28:31] 2025-11-27 11:27:40,954 | INFO     | did not find any defunct processes belonging to 46815
[2025-11-27 06:28:31] 2025-11-27 11:27:40,955 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:28:31] 2025-11-27 11:27:40,955 | INFO     | ready for new job
[2025-11-27 06:28:31] 2025-11-27 11:27:40,955 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:28:31] 2025-11-27 11:27:40,959 | INFO     | ***************************************
[2025-11-27 06:28:31] 2025-11-27 11:27:40,959 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:28:31] 2025-11-27 11:27:40,959 | INFO     | ***************************************
[2025-11-27 06:28:31] 2025-11-27 11:27:40,959 | INFO     | 
[2025-11-27 06:28:31] 2025-11-27 11:27:40,960 | INFO     | architecture information:
[2025-11-27 06:28:31] 2025-11-27 11:27:40,960 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:28:31] 2025-11-27 11:27:40,970 | INFO     | cat /etc/os-release:
[2025-11-27 06:28:31] NAME="CentOS Linux"
[2025-11-27 06:28:31] VERSION="7 (Core)"
[2025-11-27 06:28:31] ID="centos"
[2025-11-27 06:28:31] ID_LIKE="rhel fedora"
[2025-11-27 06:28:31] VERSION_ID="7"
[2025-11-27 06:28:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:28:31] ANSI_COLOR="0;31"
[2025-11-27 06:28:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:28:31] HOME_URL="https://www.centos.org/"
[2025-11-27 06:28:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:28:31] 
[2025-11-27 06:28:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:28:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:28:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:28:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:28:31] 
[2025-11-27 06:28:31] 2025-11-27 11:27:40,970 | INFO     | ***************************************
[2025-11-27 06:28:31] 2025-11-27 11:27:41,472 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-27 06:28:31] 2025-11-27 11:27:41,487 | INFO     | sufficient remaining disk space (101946753024 B)
[2025-11-27 06:28:31] 2025-11-27 11:27:41,488 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:28:31] 2025-11-27 11:27:41,488 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:28:31] 2025-11-27 11:27:41,488 | INFO     | update_server=False
[2025-11-27 06:28:31] 2025-11-27 11:27:41,488 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:28:31] 2025-11-27 11:27:41,606 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:28:31] 2025-11-27 11:27:41,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:28:31] 2025-11-27 11:27:41,862 | INFO     | all payload control threads have been joined
[2025-11-27 06:28:31] 2025-11-27 11:27:41,973 | INFO     | all data control threads have been joined
[2025-11-27 06:28:31] 2025-11-27 11:27:41,987 | INFO     | all job control threads have been joined
[2025-11-27 06:28:31] 2025-11-27 11:27:42,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:28:31] 2025-11-27 11:27:42,027 | INFO     | aborting loop
[2025-11-27 06:28:31] 2025-11-27 11:27:42,494 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:42,707 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:42,867 | INFO     | [payload] control thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:42,979 | INFO     | [data] control thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:42,992 | INFO     | [job] control thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:43,032 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:43,087 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:43,196 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:43,338 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:43,423 | INFO     | [job] validate thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:43,611 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:43,730 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:43,892 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:43,935 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:44,272 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:28:31] 2025-11-27 11:27:45,277 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:27:45,650 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:28:31] 2025-11-27 11:28:12,057 | INFO     | PID=39213 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 06:28:31] 2025-11-27 11:28:12,057 | INFO     | .. there are 3 such processes running
[2025-11-27 06:28:31] 2025-11-27 11:28:12,057 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:28:31] 2025-11-27 11:28:12,057 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:28:31] 2025-11-27 11:28:12,058 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:28:31] 2025-11-27 11:28:24,176 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:28:31] 2025-11-27 11:28:26,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140454000445248)>', '<ExcThread(monitor, started 140453349422848)>']
[2025-11-27 06:28:31] 2025-11-27 11:28:26,124 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:28:31] 2025-11-27 11:28:26,124 | INFO     | [monitor] control thread has ended
[2025-11-27 06:28:31] 2025-11-27 11:28:31,105 | INFO     | all workflow threads have been joined
[2025-11-27 06:28:31] 2025-11-27 11:28:31,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:28:31] 2025-11-27 11:28:31,106 | INFO     | traces error code: 0
[2025-11-27 06:28:31] 2025-11-27 11:28:31,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:28:31] 2025-11-27 11:28:31,216 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:28:31] 2025-11-27 11:28:31,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:28:31] 2025-11-27 11:28:31,221 [wrapper] pilotpid: 39213
[2025-11-27 06:28:31] 2025-11-27 11:28:31,223 [wrapper] Pilot exit status: 0
[2025-11-27 06:28:31] 2025-11-27 11:28:31,232 [wrapper] pandaids: 6893859013
[2025-11-27 06:28:31] 2025-11-27 11:28:31,277 [wrapper] cleanup supervisor_pilot  8855 39214
[2025-11-27 06:28:31] 2025-11-27 11:28:31,279 [wrapper] Test setup, not cleaning
[2025-11-27 06:28:31] 2025-11-27 11:28:31,281 [wrapper] apfmon messages muted
[2025-11-27 06:28:31] 2025-11-27 11:28:31,283 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:28:31] 2025-11-27 11:28:31,285 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:28:31]  *** Error codes and diagnostics ***
[2025-11-27 06:28:31]     "exeErrorCode": 0,
[2025-11-27 06:28:31]     "exeErrorDiag": "",
[2025-11-27 06:28:31]     "pilotErrorCode": 0,
[2025-11-27 06:28:31]     "pilotErrorDiag": "",
[2025-11-27 06:28:31]  *** Listing of results directory ***
[2025-11-27 06:28:31] total 1332356
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 08:12 pilot3.tar.gz
[2025-11-27 06:28:31] -rwx------ 1 boincer umatlas     36292 Nov 20 08:28 runpilot2-wrapper.sh
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 08:28 queuedata.json
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas       100 Nov 26 13:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:28:31] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 13:08 run_atlas
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas       105 Nov 26 13:08 job.xml
[2025-11-27 06:28:31] -rw-r--r-- 2 boincer umatlas 410925917 Nov 26 13:08 EVNT.47493127._000526.pool.root.1
[2025-11-27 06:28:31] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 13:08 start_atlas.sh
[2025-11-27 06:28:31] drwxrwx--x 2 boincer umatlas      4096 Nov 26 13:08 shared
[2025-11-27 06:28:31] -rw-r--r-- 2 boincer umatlas    590101 Nov 26 13:08 input.tar.gz
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas         0 Nov 26 13:08 boinc_lockfile
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 13:08 pandaJob.out
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas        57 Nov 26 13:08 setup.sh.local
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas    991530 Nov 26 13:08 agis_schedconf.cvmfs.json
[2025-11-27 06:28:31] drwx------ 5 boincer umatlas      4096 Nov 26 13:08 pilot3
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas       533 Nov 27 06:14 boinc_task_state.xml
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas      6038 Nov 27 06:20 init_data.xml
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas 927916437 Nov 27 06:27 HITS.47523449._005255.pool.root.1
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas        95 Nov 27 06:27 pilot_heartbeat.json
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas      1061 Nov 27 06:27 memory_monitor_summary.json
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas   1516240 Nov 27 06:27 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas   2224022 Nov 27 06:27 log.47523449._005255.job.log.tgz.1
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas      8633 Nov 27 06:27 heartbeat.json
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 06:28 boinc_mmap_file
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas        29 Nov 27 06:28 wrapper_checkpoint.txt
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas      4822 Nov 27 06:28 pilotlog.txt
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas   8563271 Nov 27 06:28 log.47523449._005255.job.log.1
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas       353 Nov 27 06:28 output.list
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas       620 Nov 27 06:28 runtime_log
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas  10803200 Nov 27 06:28 result.tar.gz
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas      9333 Nov 27 06:28 runtime_log.err
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas       665 Nov 27 06:28 QavKDmDtJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmewHKDmjdhSQo.diag
[2025-11-27 06:28:31] -rw-r--r-- 1 boincer umatlas     21303 Nov 27 06:28 stderr.txt
[2025-11-27 06:28:31] HITS file was successfully produced:
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas 927916437 Nov 27 06:27 shared/HITS.pool.root.1
[2025-11-27 06:28:31]  *** Contents of shared directory: ***
[2025-11-27 06:28:31] total 1318620
[2025-11-27 06:28:31] -rw-r--r-- 2 boincer umatlas 410925917 Nov 26 13:08 ATLAS.root_0
[2025-11-27 06:28:31] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 13:08 start_atlas.sh
[2025-11-27 06:28:31] -rw-r--r-- 2 boincer umatlas    590101 Nov 26 13:08 input.tar.gz
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas 927916437 Nov 27 06:27 HITS.pool.root.1
[2025-11-27 06:28:31] -rw------- 1 boincer umatlas  10803200 Nov 27 06:28 result.tar.gz
06:28:32 (35518): run_atlas exited; CPU time 481276.456070
06:28:32 (35518): called boinc_finish(0)

</stderr_txt>
]]>

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