Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-26 18:53:54 (12840): vboxwrapper version 26210
2025-11-26 18:53:54 (12840): BOINC client version: 8.2.4
2025-11-26 18:53:55 (12840): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-11-26 18:53:55 (12840): Successfully copied 'init_data.xml' to the shared directory.
2025-11-26 18:53:55 (12840): Create VM. (boinc_1153f938b4a78894, slot#0)
2025-11-26 18:53:56 (12840): Setting Memory Size for VM. (4800MB)
2025-11-26 18:53:56 (12840): Setting CPU Count for VM. (8)
2025-11-26 18:53:56 (12840): Setting Chipset Options for VM.
2025-11-26 18:53:57 (12840): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-26 18:53:57 (12840): Setting Boot Options for VM.
2025-11-26 18:53:57 (12840): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-26 18:53:58 (12840): Enabling VM Network Access.
2025-11-26 18:53:58 (12840): Disabling USB Support for VM.
2025-11-26 18:53:58 (12840): Disabling COM Port Support for VM.
2025-11-26 18:53:58 (12840): Disabling LPT Port Support for VM.
2025-11-26 18:53:59 (12840): Disabling Audio Support for VM.
2025-11-26 18:53:59 (12840): Disabling Clipboard Support for VM.
2025-11-26 18:53:59 (12840): Disabling Drag and Drop Support for VM.
2025-11-26 18:54:00 (12840): Adding storage controller(s) to VM.
2025-11-26 18:54:00 (12840): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-26 18:54:02 (12840): Adding VirtualBox Guest Additions to VM.
2025-11-26 18:54:02 (12840): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-26 18:54:02 (12840): forwarding host port 62903 to guest port 80
2025-11-26 18:54:03 (12840): Enabling remote desktop for VM.
2025-11-26 18:54:03 (12840): Enabling shared directory for VM.
2025-11-26 18:54:04 (12840): Starting VM using VBoxManage interface. (boinc_1153f938b4a78894, slot#0)
2025-11-26 18:54:08 (12840): Successfully started VM. (PID = '33984')
2025-11-26 18:54:08 (12840): Reporting VM Process ID to BOINC.
2025-11-26 18:54:08 (12840): Guest Log: BIOS: VirtualBox 7.1.10
2025-11-26 18:54:08 (12840): Guest Log: CPUID EDX: 0x178bfbff
2025-11-26 18:54:08 (12840): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-26 18:54:08 (12840): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-26 18:54:08 (12840): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-26 18:54:08 (12840): Detected: Web Application Enabled (http://localhost:62903)
2025-11-26 18:54:08 (12840): Detected: Remote Desktop Enabled (localhost:62904)
2025-11-26 18:54:08 (12840): Preference change detected
2025-11-26 18:54:08 (12840): Setting CPU throttle for VM. (100%)
2025-11-26 18:54:09 (12840): Setting network throttle for VM. (5000KB)
2025-11-26 18:54:09 (12840): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-26 18:54:10 (12840): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-26 18:54:10 (12840): Guest Log: BIOS: Booting from Hard Disk...
2025-11-26 18:54:13 (12840): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-26 18:54:13 (12840): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-26 18:54:13 (12840): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-26 18:55:01 (12840): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-26 18:55:01 (12840): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-26 18:55:14 (12840): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-26 18:55:14 (12840): Guest Log: 00:00:00.000081 main     Log opened 2025-11-26T18:55:12.808659000Z
2025-11-26 18:55:14 (12840): Guest Log: 00:00:00.000150 main     OS Product: Linux
2025-11-26 18:55:14 (12840): Guest Log: 00:00:00.000169 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-26 18:55:14 (12840): Guest Log: 00:00:00.000184 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-26 18:55:14 (12840): Guest Log: 00:00:00.000199 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-26 18:55:14 (12840): Guest Log: 00:00:00.000199 main     Process ID: 1379
2025-11-26 18:55:14 (12840): Guest Log: 00:00:00.000200 main     Package type: LINUX_64BITS_GENERIC
2025-11-26 18:55:14 (12840): Guest Log: 00:00:00.000646 main     5.2.32 r132073 started. Verbose level = 0
2025-11-26 18:55:15 (12840): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-26 18:55:15 (12840): Guest Log: [INFO] Mounting shared directory
2025-11-26 18:55:15 (12840): Guest Log: [INFO] Checking for init_data.xml
2025-11-26 18:55:24 (12840): Guest Log: 00:00:10.005060 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 637 932 308 000ns (GuestNow=1 764 179 674 877 648 000 ns GuestLast=1 764 183 312 809 956 000 ns fSetTimeLastLoop=true )
2025-11-26 18:56:32 (12840): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-26 18:56:32 (12840): Guest Log: [INFO] Detected branch: prod
2025-11-26 18:56:32 (12840): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-26 18:56:32 (12840): Guest Log: Copying input files
2025-11-26 18:56:33 (12840): Guest Log: Copied input files into RunAtlas.
2025-11-26 18:56:33 (12840): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-26 18:56:33 (12840): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-26 18:56:33 (12840): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-26 18:56:33 (12840): Guest Log: Further information can be found at the LHC@home message board.
2025-11-26 18:57:10 (12840): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-26 18:57:10 (12840): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-26 18:57:10 (12840): Guest Log: 2.6.3.0 1681 1 31616 153330 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
2025-11-26 18:57:12 (12840): Guest Log: copied the webapp to /var/www
2025-11-26 18:57:12 (12840): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-26 18:57:12 (12840): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-26 18:57:12 (12840): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-26 18:57:12 (12840): Guest Log:  *** Starting ATLAS job. (PandaID=6895350077 taskID=47556137) ***
2025-11-26 20:34:11 (12840): Status Report: Elapsed Time: '6000.000000'
2025-11-26 20:34:11 (12840): Status Report: CPU Time: '38903.421875'
2025-11-26 22:14:13 (12840): Status Report: Elapsed Time: '12000.000000'
2025-11-26 22:14:13 (12840): Status Report: CPU Time: '86557.484375'
2025-11-26 23:06:51 (12840): Guest Log:  *** Job finished ***
2025-11-26 23:06:51 (12840): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:05:55,003 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:05:55,003 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:05:58,323 | INFO     | [monitor] cgroup control has ended
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:05:59,935 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140328813872960)>', '<ExcThread(monitor, started 140327721629440)>']
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:00,112 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:00,112 | INFO     | [monitor] control thread has ended
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:04,979 | INFO     | all workflow threads have been joined
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:04,979 | INFO     | end of generic workflow (traces error code: 0)
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:04,979 | INFO     | traces error code: 0
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:04,979 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:05,153 [wrapper] ==== pilot stdout END ====
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:05,156 [wrapper] ==== wrapper stdout RESUME ====
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:05,159 [wrapper] pilotpid: 6168
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:05,163 [wrapper] Pilot exit status: 0
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:05,188 [wrapper] pandaids: 6895350077
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:05,212 [wrapper] cleanup supervisor_pilot 17796 6169
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:05,215 [wrapper] Test setup, not cleaning
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:05,218 [wrapper] apfmon messages muted
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:05,222 [wrapper] ==== wrapper stdout END ====
2025-11-26 23:06:51 (12840): Guest Log: 2025-11-26 22:06:05,225 [wrapper] ==== wrapper stderr END ====
2025-11-26 23:06:51 (12840): Guest Log:  *** Error codes and diagnostics ***
2025-11-26 23:06:51 (12840): Guest Log:     "exeErrorCode": 0,
2025-11-26 23:06:51 (12840): Guest Log:     "exeErrorDiag": "",
2025-11-26 23:06:51 (12840): Guest Log:     "pilotErrorCode": 0,
2025-11-26 23:06:51 (12840): Guest Log:     "pilotErrorDiag": "",
2025-11-26 23:06:51 (12840): Guest Log:  *** Listing of results directory ***
2025-11-26 23:06:51 (12840): Guest Log: total 913008
2025-11-26 23:06:51 (12840): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 22 20:26 pilot3.tar.gz
2025-11-26 23:06:51 (12840): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 22 20:33 queuedata.json
2025-11-26 23:06:51 (12840): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 22 20:35 runpilot2-wrapper.sh
2025-11-26 23:06:51 (12840): Guest Log: -rwxr-xr-x. 1 atlas atlas      8773 Nov 26 17:55 init_data.xml
2025-11-26 23:06:51 (12840): Guest Log: -rwxr-xr-x. 1 atlas atlas    590096 Nov 26 17:55 input.tar.gz
2025-11-26 23:06:51 (12840): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 26 17:55 start_atlas.sh
2025-11-26 23:06:51 (12840): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 26 17:55 EVNT.47483658._000495.pool.root.1 -> /data/./ATLAS.root_0
2025-11-26 23:06:51 (12840): Guest Log: -rw-r--r--. 1 atlas atlas      2784 Nov 26 17:56 pandaJob.out
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas    991530 Nov 26 18:00 agis_schedconf.cvmfs.json
2025-11-26 23:06:51 (12840): Guest Log: drwx------. 5 atlas atlas      4096 Nov 26 18:00 pilot3
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas 923985243 Nov 26 22:04 HITS.47556137._004902.pool.root.1
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 26 22:04 memory_monitor_summary.json
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 26 22:04 agis_ddmendpoints.agis.ALL.json
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas   1560459 Nov 26 22:04 log.47556137._004902.job.log.tgz.1
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas        95 Nov 26 22:05 pilot_heartbeat.json
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas      8602 Nov 26 22:05 heartbeat.json
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas      4877 Nov 26 22:06 pilotlog.txt
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas   1984811 Nov 26 22:06 log.47556137._004902.job.log.1
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas       353 Nov 26 22:06 output.list
2025-11-26 23:06:51 (12840): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 26 22:06 runtime_log
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas   3563520 Nov 26 22:06 result.tar.gz
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas       677 Nov 26 22:06 u8vNDmuV9g8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmyNKKDmTvFymn.diag
2025-11-26 23:06:51 (12840): Guest Log: -rw-r--r--. 1 atlas atlas      8791 Nov 26 22:06 runtime_log.err
2025-11-26 23:06:51 (12840): Guest Log: Looking for outputfile HITS.47556137._004902.pool.root.1
2025-11-26 23:06:51 (12840): Guest Log: HITS file was successfully produced
2025-11-26 23:06:51 (12840): Guest Log: -rw-------. 1 atlas atlas 923985243 Nov 26 22:04 /home/atlas/RunAtlas/HITS.47556137._004902.pool.root.1
2025-11-26 23:06:54 (12840): Guest Log: Successfully finished the ATLAS job!
2025-11-26 23:06:54 (12840): Guest Log: Copying the results back to the shared directory!
2025-11-26 23:06:54 (12840): Guest Log:  *** Contents of shared directory: ***
2025-11-26 23:06:54 (12840): Guest Log: total 1309240
2025-11-26 23:06:54 (12840): Guest Log: -rwxrwxrwx. 1 root root 412485983 Nov 26 17:53 ATLAS.root_0
2025-11-26 23:06:54 (12840): Guest Log: -rwxrwxrwx. 1 root root 923985243 Nov 26  2025 HITS.pool.root.1
2025-11-26 23:06:54 (12840): Guest Log: -rwxrwxrwx. 1 root root      8773 Nov 26 17:53 init_data.xml
2025-11-26 23:06:54 (12840): Guest Log: -rwxrwxrwx. 1 root root    590096 Nov 26 17:52 input.tar.gz
2025-11-26 23:06:54 (12840): Guest Log: -rwxrwxrwx. 1 root root   3563520 Nov 26  2025 result.tar.gz
2025-11-26 23:06:54 (12840): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 26 17:52 start_atlas.sh
2025-11-26 23:06:54 (12840): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-26 23:06:54 (12840): VM Completion File Detected.
2025-11-26 23:06:54 (12840): Powering off VM.
2025-11-26 23:06:54 (12840): Successfully stopped VM.
2025-11-26 23:06:54 (12840): Deregistering VM. (boinc_1153f938b4a78894, slot#0)
2025-11-26 23:06:54 (12840): Removing network bandwidth throttle group from VM.
2025-11-26 23:06:55 (12840): Removing VM from VirtualBox.
2025-11-26 23:07:00 (12840): called boinc_finish(0)

</stderr_txt>
]]>

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