Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:12:14 (2242984): wrapper (7.7.26015): starting
13:12:14 (2242984): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 13:12:14] Arguments: --nthreads 8
[2025-11-26 13:12:14] Threads: 8
[2025-11-26 13:12:14] Checking for CVMFS
[2025-11-26 13:12:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:12:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:12:14] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:12:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:12:15] 2.13.3.0 12497 30259 236096 153330 0 688 23165370 32935936 42274 16776704 0 154768298 99.504 191333122 37247 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 13:12:15] CVMFS is ok
[2025-11-26 13:12:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:12:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:12:15] Further information can be found at the LHC@home message board.
[2025-11-26 13:12:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:12:15] Checking for apptainer binary...
[2025-11-26 13:12:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:12:15] Running /usr/bin/apptainer --version
[2025-11-26 13:12:15] apptainer version 1.4.4-1.el9
[2025-11-26 13:12:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:12:15] c7-7-35.aglt2.org
[2025-11-26 13:12:15] apptainer works
[2025-11-26 13:12:15] Set ATHENA_PROC_NUMBER=8
[2025-11-26 13:12:15] Set ATHENA_CORE_NUMBER=8
[2025-11-26 13:12:15] Starting ATLAS job with PandaID=6897531587
[2025-11-26 13:12:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:38:07]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:38:07] 2025-11-27 08:36:57,589 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 03:38:07] 2025-11-27 08:36:57,882 | INFO     | time since job start (51865s) is within the limit (172800.0s)
[2025-11-27 03:38:07] 2025-11-27 08:36:59,676 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 03:38:07] 2025-11-27 08:36:59,681 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3191.1442604166664
[2025-11-27 03:38:07] 2025-11-27 08:36:59,709 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897531587/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:38:07] 2025-11-27 08:36:59,710 | INFO     | extracted standard info from prmon json
[2025-11-27 03:38:07] 2025-11-27 08:36:59,710 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:38:07] 2025-11-27 08:36:59,710 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:38:07] 2025-11-27 08:36:59,721 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:38:07] 2025-11-27 08:36:59,722 | INFO     | sum of square deviations: 190428713744.80472
[2025-11-27 03:38:07] 2025-11-27 08:36:59,735 | INFO     | sum of deviations: 1509391866505.4143
[2025-11-27 03:38:07] 2025-11-27 08:36:59,735 | INFO     | mean x: 1764206708.2894118
[2025-11-27 03:38:07] 2025-11-27 08:36:59,735 | INFO     | mean y: 2860673.3235294116
[2025-11-27 03:38:07] 2025-11-27 08:36:59,735 | INFO     | intersect: -13980740874.785845
[2025-11-27 03:38:07] 2025-11-27 08:36:59,736 | INFO     | chi2: 8.862771465408201
[2025-11-27 03:38:07] 2025-11-27 08:36:59,737 | INFO     | sum of square deviations: 187088120874.17056
[2025-11-27 03:38:07] 2025-11-27 08:36:59,750 | INFO     | sum of deviations: 1812225509814.6758
[2025-11-27 03:38:07] 2025-11-27 08:36:59,750 | INFO     | mean x: 1764206555.7940829
[2025-11-27 03:38:07] 2025-11-27 08:36:59,750 | INFO     | mean y: 2874499.0153846154
[2025-11-27 03:38:07] 2025-11-27 08:36:59,750 | INFO     | intersect: -17086078610.640457
[2025-11-27 03:38:07] 2025-11-27 08:36:59,751 | INFO     | chi2: 5.349589072807014
[2025-11-27 03:38:07] 2025-11-27 08:36:59,751 | INFO     | current chi2=5.349589072807014 (change=39.639771896559644 %)
[2025-11-27 03:38:07] 2025-11-27 08:36:59,752 | INFO     | sum of square deviations: 183786728221.19028
[2025-11-27 03:38:07] 2025-11-27 08:36:59,769 | INFO     | sum of deviations: 1841606483173.7927
[2025-11-27 03:38:07] 2025-11-27 08:36:59,769 | INFO     | mean x: 1764206403.2964287
[2025-11-27 03:38:07] 2025-11-27 08:36:59,769 | INFO     | mean y: 2875847.8964285715
[2025-11-27 03:38:07] 2025-11-27 08:36:59,769 | INFO     | intersect: -17675081540.067024
[2025-11-27 03:38:07] 2025-11-27 08:36:59,770 | INFO     | chi2: 5.142266211028258
[2025-11-27 03:38:07] 2025-11-27 08:36:59,770 | INFO     | current chi2=5.142266211028258 (change=3.8754913500294315 %)
[2025-11-27 03:38:07] 2025-11-27 08:36:59,770 | INFO     | right removable region: 839
[2025-11-27 03:38:07] 2025-11-27 08:36:59,771 | INFO     | sum of square deviations: 187087711564.1706
[2025-11-27 03:38:07] 2025-11-27 08:36:59,785 | INFO     | sum of deviations: 1187555497706.0305
[2025-11-27 03:38:07] 2025-11-27 08:36:59,785 | INFO     | mean x: 1764206860.7940829
[2025-11-27 03:38:07] 2025-11-27 08:36:59,785 | INFO     | mean y: 2875360.0863905326
[2025-11-27 03:38:07] 2025-11-27 08:36:59,785 | INFO     | intersect: -11195580910.025711
[2025-11-27 03:38:07] 2025-11-27 08:36:59,786 | INFO     | chi2: 5.102031015835947
[2025-11-27 03:38:07] 2025-11-27 08:36:59,786 | INFO     | current chi2=5.102031015835947 (change=42.43300714963254 %)
[2025-11-27 03:38:07] 2025-11-27 08:36:59,787 | INFO     | sum of square deviations: 183786063747.59528
[2025-11-27 03:38:07] 2025-11-27 08:36:59,801 | INFO     | sum of deviations: 1010112688756.4865
[2025-11-27 03:38:07] 2025-11-27 08:36:59,801 | INFO     | mean x: 1764207013.297619
[2025-11-27 03:38:07] 2025-11-27 08:36:59,801 | INFO     | mean y: 2883548.194047619
[2025-11-27 03:38:07] 2025-11-27 08:36:59,801 | INFO     | intersect: -9693433209.383963
[2025-11-27 03:38:07] 2025-11-27 08:36:59,802 | INFO     | chi2: 3.973857870684257
[2025-11-27 03:38:07] 2025-11-27 08:36:59,802 | INFO     | current chi2=3.973857870684257 (change=22.112236120282454 %)
[2025-11-27 03:38:07] 2025-11-27 08:36:59,802 | INFO     | left removable region: 20
[2025-11-27 03:38:07] 2025-11-27 08:36:59,803 | INFO     | sum of square deviations: 170343921348.2858
[2025-11-27 03:38:07] 2025-11-27 08:36:59,815 | INFO     | sum of deviations: 1237104846303.2383
[2025-11-27 03:38:07] 2025-11-27 08:36:59,816 | INFO     | mean x: 1764206982.8095238
[2025-11-27 03:38:07] 2025-11-27 08:36:59,816 | INFO     | mean y: 2903984.354090354
[2025-11-27 03:38:07] 2025-11-27 08:36:59,816 | INFO     | intersect: -12809464024.089897
[2025-11-27 03:38:07] 2025-11-27 08:36:59,819 | INFO     | chi2: 0.11865495150818134
[2025-11-27 03:38:07] 2025-11-27 08:36:59,819 | INFO     | current memory leak: 7.26 B/s (using 819 data points, chi2=0.12)
[2025-11-27 03:38:07] 2025-11-27 08:36:59,845 | INFO     | could have reported an average CPU frequency of 3158 MHz (32 samples)
[2025-11-27 03:38:07] 2025-11-27 08:36:59,845 | INFO     | ..............................
[2025-11-27 03:38:07] 2025-11-27 08:36:59,845 | INFO     | . Timing measurements:
[2025-11-27 03:38:07] 2025-11-27 08:36:59,845 | INFO     | . get job = 0 s
[2025-11-27 03:38:07] 2025-11-27 08:36:59,846 | INFO     | . initial setup = 3 s
[2025-11-27 03:38:07] 2025-11-27 08:36:59,846 | INFO     | . payload setup = 19 s
[2025-11-27 03:38:07] 2025-11-27 08:36:59,846 | INFO     | . stage-in = 0 s
[2025-11-27 03:38:07] 2025-11-27 08:36:59,846 | INFO     | . payload execution = 51802 s
[2025-11-27 03:38:07] 2025-11-27 08:36:59,846 | INFO     | . stage-out = 3 s
[2025-11-27 03:38:07] 2025-11-27 08:36:59,846 | INFO     | . log creation = 0 s
[2025-11-27 03:38:07] 2025-11-27 08:36:59,846 | INFO     | ..............................
[2025-11-27 03:38:07] 2025-11-27 08:36:59,908 | INFO     | time since job start (51867s) is within the limit (172800.0s)
[2025-11-27 03:38:07] 2025-11-27 08:37:00,428 | INFO     | 
[2025-11-27 03:38:07] 2025-11-27 08:37:00,428 | INFO     | job summary report
[2025-11-27 03:38:07] 2025-11-27 08:37:00,428 | INFO     | --------------------------------------------------
[2025-11-27 03:38:07] 2025-11-27 08:37:00,428 | INFO     | PanDA job id: 6897531587
[2025-11-27 03:38:07] 2025-11-27 08:37:00,428 | INFO     | task id: 47556161
[2025-11-27 03:38:07] 2025-11-27 08:37:00,428 | INFO     | errors: (none)
[2025-11-27 03:38:07] 2025-11-27 08:37:00,428 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:38:07] 2025-11-27 08:37:00,428 | INFO     | pilot state: finished 
[2025-11-27 03:38:07] 2025-11-27 08:37:00,428 | INFO     | transexitcode: 0
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | exeerrorcode: 0
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | exeerrordiag: 
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | exitcode: 0
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | exitmsg: OK
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | cpuconsumptiontime: 202085 s
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | nevents: 1000
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | neventsw: 0
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | pid: 2260237
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | pgrp: 2260237
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | corecount: 8
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | event service: False
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | sizes: {0: 2284265, 1: 2284293, 11: 2284583, 22: 2284583, 51825: 2333858, 51829: 2342852, 51830: 2343036, 51838: 2343282}
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | --------------------------------------------------
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | 
[2025-11-27 03:38:07] 2025-11-27 08:37:00,429 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 03:38:07] 2025-11-27 08:37:00,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,479 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,479 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,479 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,479 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,479 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,480 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,480 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,480 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:38:07] 2025-11-27 08:37:00,480 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,480 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:38:07] 2025-11-27 08:37:00,480 | INFO     | job 6897531587 has completed (purged errors)
[2025-11-27 03:38:07] 2025-11-27 08:37:00,481 | INFO     | overall cleanup function is called
[2025-11-27 03:38:07] 2025-11-27 08:37:01,562 | INFO     | --- collectZombieJob: --- 10, [2260237]
[2025-11-27 03:38:07] 2025-11-27 08:37:01,562 | INFO     | zombie collector waiting for pid 2260237
[2025-11-27 03:38:07] 2025-11-27 08:37:01,562 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:38:07] 2025-11-27 08:37:01,562 | INFO     | collected zombie processes
[2025-11-27 03:38:07] 2025-11-27 08:37:01,562 | INFO     | will attempt to kill all subprocesses of pid=2260237
[2025-11-27 03:38:07] 2025-11-27 08:37:02,909 | INFO     | process IDs to be killed: [2260237] (in reverse order)
[2025-11-27 03:38:07] 2025-11-27 08:37:03,162 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:38:07] 2025-11-27 08:37:03,162 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:38:07] 2025-11-27 08:37:03,201 | INFO     | did not find any defunct processes belonging to 2260237
[2025-11-27 03:38:07] 2025-11-27 08:37:03,266 | INFO     | did not find any defunct processes belonging to 2260237
[2025-11-27 03:38:07] 2025-11-27 08:37:03,272 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:38:07] 2025-11-27 08:37:03,272 | INFO     | ready for new job
[2025-11-27 03:38:07] 2025-11-27 08:37:03,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:38:07] 2025-11-27 08:37:03,277 | INFO     | ***************************************
[2025-11-27 03:38:07] 2025-11-27 08:37:03,277 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:38:07] 2025-11-27 08:37:03,277 | INFO     | ***************************************
[2025-11-27 03:38:07] 2025-11-27 08:37:03,277 | INFO     | 
[2025-11-27 03:38:07] 2025-11-27 08:37:03,282 | INFO     | architecture information:
[2025-11-27 03:38:07] 2025-11-27 08:37:03,283 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:38:07] 2025-11-27 08:37:03,301 | INFO     | cat /etc/os-release:
[2025-11-27 03:38:07] NAME="CentOS Linux"
[2025-11-27 03:38:07] VERSION="7 (Core)"
[2025-11-27 03:38:07] ID="centos"
[2025-11-27 03:38:07] ID_LIKE="rhel fedora"
[2025-11-27 03:38:07] VERSION_ID="7"
[2025-11-27 03:38:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:38:07] ANSI_COLOR="0;31"
[2025-11-27 03:38:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:38:07] HOME_URL="https://www.centos.org/"
[2025-11-27 03:38:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:38:07] 
[2025-11-27 03:38:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:38:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:38:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:38:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:38:07] 
[2025-11-27 03:38:07] 2025-11-27 08:37:03,301 | INFO     | ***************************************
[2025-11-27 03:38:07] 2025-11-27 08:37:03,807 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 03:38:07] 2025-11-27 08:37:03,835 | INFO     | sufficient remaining disk space (63539511296 B)
[2025-11-27 03:38:07] 2025-11-27 08:37:03,835 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:38:07] 2025-11-27 08:37:03,835 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:38:07] 2025-11-27 08:37:03,835 | INFO     | update_server=False
[2025-11-27 03:38:07] 2025-11-27 08:37:03,835 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:38:07] 2025-11-27 08:37:03,835 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:38:07] 2025-11-27 08:37:03,836 | INFO     | aborting loop
[2025-11-27 03:38:07] 2025-11-27 08:37:03,928 | INFO     | all payload control threads have been joined
[2025-11-27 03:38:07] 2025-11-27 08:37:04,134 | INFO     | all job control threads have been joined
[2025-11-27 03:38:07] 2025-11-27 08:37:04,377 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:38:07] 2025-11-27 08:37:04,617 | INFO     | all data control threads have been joined
[2025-11-27 03:38:07] 2025-11-27 08:37:04,840 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:04,846 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:04,909 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:04,936 | INFO     | [payload] control thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:05,069 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:05,140 | INFO     | [job] control thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:05,467 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:38:07] 2025-11-27 08:37:05,586 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:05,617 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:05,624 | INFO     | [data] control thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:05,643 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:05,983 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:06,133 | INFO     | [job] validate thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:06,286 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:06,386 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:06,473 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:06,927 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:38:07] 2025-11-27 08:37:10,941 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:38:07] 2025-11-27 08:37:34,854 | INFO     | PID=2246749 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:38:07] 2025-11-27 08:37:34,854 | INFO     | .. there are 63 such processes running
[2025-11-27 03:38:07] 2025-11-27 08:37:34,855 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:38:07] 2025-11-27 08:37:34,855 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:38:07] 2025-11-27 08:37:34,855 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:38:07] 2025-11-27 08:38:01,165 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:38:07] 2025-11-27 08:38:01,915 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375785707328)>', '<ExcThread(monitor, started 140375142418176)>']
[2025-11-27 03:38:07] 2025-11-27 08:38:02,086 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:38:07] 2025-11-27 08:38:02,086 | INFO     | [monitor] control thread has ended
[2025-11-27 03:38:07] 2025-11-27 08:38:06,943 | INFO     | all workflow threads have been joined
[2025-11-27 03:38:07] 2025-11-27 08:38:06,943 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:38:07] 2025-11-27 08:38:06,943 | INFO     | traces error code: 0
[2025-11-27 03:38:07] 2025-11-27 08:38:06,943 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:38:07] 2025-11-27 08:38:07,220 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:38:07] 2025-11-27 08:38:07,222 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:38:07] 2025-11-27 08:38:07,232 [wrapper] pilotpid: 2246749
[2025-11-27 03:38:07] 2025-11-27 08:38:07,240 [wrapper] Pilot exit status: 0
[2025-11-27 03:38:07] 2025-11-27 08:38:07,270 [wrapper] pandaids: 6897531587
[2025-11-27 03:38:07] 2025-11-27 08:38:07,587 [wrapper] cleanup supervisor_pilot 3447757 2246750
[2025-11-27 03:38:07] 2025-11-27 08:38:07,598 [wrapper] Test setup, not cleaning
[2025-11-27 03:38:07] 2025-11-27 08:38:07,601 [wrapper] apfmon messages muted
[2025-11-27 03:38:07] 2025-11-27 08:38:07,611 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:38:07] 2025-11-27 08:38:07,619 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:38:07]  *** Error codes and diagnostics ***
[2025-11-27 03:38:07]     "exeErrorCode": 0,
[2025-11-27 03:38:07]     "exeErrorDiag": "",
[2025-11-27 03:38:07]     "pilotErrorCode": 0,
[2025-11-27 03:38:07]     "pilotErrorDiag": "",
[2025-11-27 03:38:07]  *** Listing of results directory ***
[2025-11-27 03:38:07] total 1333704
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 03:38:07] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas       100 Nov 26 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:38:07] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 13:12 run_atlas
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas       105 Nov 26 13:12 job.xml
[2025-11-27 03:38:07] -rw-r--r--. 2 boincer umatlas 411235722 Nov 26 13:12 EVNT.47483658._002304.pool.root.1
[2025-11-27 03:38:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 13:12 start_atlas.sh
[2025-11-27 03:38:07] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 13:12 shared
[2025-11-27 03:38:07] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 13:12 input.tar.gz
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas         0 Nov 26 13:12 boinc_lockfile
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 13:12 pandaJob.out
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas        57 Nov 26 13:12 setup.sh.local
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas    991530 Nov 26 13:12 agis_schedconf.cvmfs.json
[2025-11-27 03:38:07] drwx------. 5 boincer umatlas      4096 Nov 26 13:12 pilot3
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas       533 Nov 27 03:28 boinc_task_state.xml
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 03:30 init_data.xml
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas 933001716 Nov 27 03:36 HITS.47556161._002872.pool.root.1
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas      1062 Nov 27 03:36 memory_monitor_summary.json
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas   1516240 Nov 27 03:36 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas   2049134 Nov 27 03:36 log.47556161._002872.job.log.tgz.1
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas      8611 Nov 27 03:36 heartbeat.json
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas        95 Nov 27 03:37 pilot_heartbeat.json
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas        29 Nov 27 03:38 wrapper_checkpoint.txt
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas      4824 Nov 27 03:38 pilotlog.txt
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas   6724401 Nov 27 03:38 log.47556161._002872.job.log.1
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas       353 Nov 27 03:38 output.list
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas       620 Nov 27 03:38 runtime_log
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 03:38 boinc_mmap_file
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas   8796160 Nov 27 03:38 result.tar.gz
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 03:38 runtime_log.err
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas       664 Nov 27 03:38 EzKMDmgaBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmkYMKDmeTDnwn.diag
[2025-11-27 03:38:07] -rw-r--r--. 1 boincer umatlas     21353 Nov 27 03:38 stderr.txt
[2025-11-27 03:38:07] HITS file was successfully produced:
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas 933001716 Nov 27 03:36 shared/HITS.pool.root.1
[2025-11-27 03:38:07]  *** Contents of shared directory: ***
[2025-11-27 03:38:07] total 1321932
[2025-11-27 03:38:07] -rw-r--r--. 2 boincer umatlas 411235722 Nov 26 13:12 ATLAS.root_0
[2025-11-27 03:38:07] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 13:12 start_atlas.sh
[2025-11-27 03:38:07] -rw-r--r--. 2 boincer umatlas    590105 Nov 26 13:12 input.tar.gz
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas 933001716 Nov 27 03:36 HITS.pool.root.1
[2025-11-27 03:38:07] -rw-------. 1 boincer umatlas   8796160 Nov 27 03:38 result.tar.gz
03:38:50 (2242984): run_atlas exited; CPU time 202726.620051
03:38:50 (2242984): called boinc_finish(0)

</stderr_txt>
]]>

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