Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
13:36:00 (26395): wrapper (7.7.26015): starting
13:36:00 (26395): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 13:36:00] Arguments: --nthreads 12
[2025-11-26 13:36:00] Threads: 12
[2025-11-26 13:36:00] Checking for CVMFS
[2025-11-26 13:36:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:36:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:36:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:36:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:36:00] 2.11.2.0 2924 288003 98468 153331 3 81 18365546 20275201 1 130560 4 131418448 99.966 17373093 14086 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 13:36:00] CVMFS is ok
[2025-11-26 13:36:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:36:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:36:00] Further information can be found at the LHC@home message board.
[2025-11-26 13:36:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:36:00] Checking for apptainer binary...
[2025-11-26 13:36:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:36:00] Running /usr/bin/apptainer --version
[2025-11-26 13:36:00] apptainer version 1.3.2-1.el7
[2025-11-26 13:36:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:36:02] c-205-28.aglt2.org
[2025-11-26 13:36:02] apptainer works
[2025-11-26 13:36:02] Set ATHENA_PROC_NUMBER=12
[2025-11-26 13:36:02] Set ATHENA_CORE_NUMBER=12
[2025-11-26 13:36:02] Starting ATLAS job with PandaID=6897488863
[2025-11-26 13:36:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 20:54:05]  *** The last 200 lines of the pilot log: ***
[2025-11-26 20:54:05] 2025-11-27 01:53:10,545 | INFO     | time since job start (26213s) is within the limit (172800.0s)
[2025-11-26 20:54:05] 2025-11-27 01:53:12,551 | INFO     | time since job start (26215s) is within the limit (172800.0s)
[2025-11-26 20:54:05] 2025-11-27 01:53:12,914 | INFO     | monitor loop #1965: job 0:6897488863 is in state 'finished'
[2025-11-26 20:54:05] 2025-11-27 01:53:12,916 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,319 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 20:54:05] 2025-11-27 01:53:14,323 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-26 20:54:05] 2025-11-27 01:53:14,325 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897488863/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,326 | INFO     | extracted standard info from prmon json
[2025-11-26 20:54:05] 2025-11-27 01:53:14,326 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 20:54:05] 2025-11-27 01:53:14,326 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 20:54:05] 2025-11-27 01:53:14,333 | INFO     | fitting pss+swap vs Time
[2025-11-26 20:54:05] 2025-11-27 01:53:14,334 | INFO     | sum of square deviations: 24653779511.804714
[2025-11-26 20:54:05] 2025-11-27 01:53:14,338 | INFO     | sum of deviations: 376380267041.6742
[2025-11-26 20:54:05] 2025-11-27 01:53:14,338 | INFO     | mean x: 1764195291.7627907
[2025-11-26 20:54:05] 2025-11-27 01:53:14,338 | INFO     | mean y: 3419590.604651163
[2025-11-26 20:54:05] 2025-11-27 01:53:14,338 | INFO     | intersect: -26929906989.58169
[2025-11-26 20:54:05] 2025-11-27 01:53:14,339 | INFO     | chi2: 6.270257121977861
[2025-11-26 20:54:05] 2025-11-27 01:53:14,339 | INFO     | sum of square deviations: 23803760828.955254
[2025-11-26 20:54:05] 2025-11-27 01:53:14,343 | INFO     | sum of deviations: 545970253160.317
[2025-11-26 20:54:05] 2025-11-27 01:53:14,343 | INFO     | mean x: 1764195139.2658823
[2025-11-26 20:54:05] 2025-11-27 01:53:14,343 | INFO     | mean y: 3449985.9529411765
[2025-11-26 20:54:05] 2025-11-27 01:53:14,343 | INFO     | intersect: -40460662963.692635
[2025-11-26 20:54:05] 2025-11-27 01:53:14,344 | INFO     | chi2: 3.0926161103045366
[2025-11-26 20:54:05] 2025-11-27 01:53:14,344 | INFO     | current chi2=3.0926161103045366 (change=50.6780017128067 %)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,345 | INFO     | sum of square deviations: 22973509958.597603
[2025-11-26 20:54:05] 2025-11-27 01:53:14,348 | INFO     | sum of deviations: 592562949932.8525
[2025-11-26 20:54:05] 2025-11-27 01:53:14,348 | INFO     | mean x: 1764194986.7690477
[2025-11-26 20:54:05] 2025-11-27 01:53:14,348 | INFO     | mean y: 3458495.080952381
[2025-11-26 20:54:05] 2025-11-27 01:53:14,349 | INFO     | intersect: -45500976286.570145
[2025-11-26 20:54:05] 2025-11-27 01:53:14,349 | INFO     | chi2: 2.5956211156576874
[2025-11-26 20:54:05] 2025-11-27 01:53:14,349 | INFO     | current chi2=2.5956211156576874 (change=16.07037462525244 %)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,349 | INFO     | right removable region: 419
[2025-11-26 20:54:05] 2025-11-27 01:53:14,350 | INFO     | sum of square deviations: 23803691898.95525
[2025-11-26 20:54:05] 2025-11-27 01:53:14,353 | INFO     | sum of deviations: 229229134657.3672
[2025-11-26 20:54:05] 2025-11-27 01:53:14,354 | INFO     | mean x: 1764195444.2658823
[2025-11-26 20:54:05] 2025-11-27 01:53:14,354 | INFO     | mean y: 3445916.5011764704
[2025-11-26 20:54:05] 2025-11-27 01:53:14,354 | INFO     | intersect: -16985725207.549839
[2025-11-26 20:54:05] 2025-11-27 01:53:14,354 | INFO     | chi2: 3.824143488645957
[2025-11-26 20:54:05] 2025-11-27 01:53:14,354 | INFO     | current chi2=3.824143488645957 (change=39.0113768183132 %)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,355 | INFO     | sum of square deviations: 22973372098.597607
[2025-11-26 20:54:05] 2025-11-27 01:53:14,359 | INFO     | sum of deviations: 197274141365.16873
[2025-11-26 20:54:05] 2025-11-27 01:53:14,359 | INFO     | mean x: 1764195596.7690477
[2025-11-26 20:54:05] 2025-11-27 01:53:14,359 | INFO     | mean y: 3451778.1976190475
[2025-11-26 20:54:05] 2025-11-27 01:53:14,359 | INFO     | intersect: -15145833666.670555
[2025-11-26 20:54:05] 2025-11-27 01:53:14,359 | INFO     | chi2: 3.77425120879325
[2025-11-26 20:54:05] 2025-11-27 01:53:14,360 | INFO     | current chi2=3.77425120879325 (change=1.304665476095218 %)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,360 | INFO     | left removable region: 20
[2025-11-26 20:54:05] 2025-11-27 01:53:14,360 | INFO     | sum of square deviations: 19696896297.22306
[2025-11-26 20:54:05] 2025-11-27 01:53:14,364 | INFO     | sum of deviations: 373028289482.3408
[2025-11-26 20:54:05] 2025-11-27 01:53:14,364 | INFO     | mean x: 1764195566.2731829
[2025-11-26 20:54:05] 2025-11-27 01:53:14,364 | INFO     | mean y: 3499418.1253132834
[2025-11-26 20:54:05] 2025-11-27 01:53:14,364 | INFO     | intersect: -33407594617.63887
[2025-11-26 20:54:05] 2025-11-27 01:53:14,364 | INFO     | chi2: 0.04381272452519221
[2025-11-26 20:54:05] 2025-11-27 01:53:14,365 | INFO     | current memory leak: 18.94 B/s (using 399 data points, chi2=0.04)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,365 | INFO     | could have reported an average CPU frequency of 2385 MHz (18 samples)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,365 | INFO     | ..............................
[2025-11-26 20:54:05] 2025-11-27 01:53:14,365 | INFO     | . Timing measurements:
[2025-11-26 20:54:05] 2025-11-27 01:53:14,365 | INFO     | . get job = 0 s
[2025-11-26 20:54:05] 2025-11-27 01:53:14,365 | INFO     | . initial setup = 2 s
[2025-11-26 20:54:05] 2025-11-27 01:53:14,366 | INFO     | . payload setup = 7 s
[2025-11-26 20:54:05] 2025-11-27 01:53:14,366 | INFO     | . stage-in = 0 s
[2025-11-26 20:54:05] 2025-11-27 01:53:14,366 | INFO     | . payload execution = 26177 s
[2025-11-26 20:54:05] 2025-11-27 01:53:14,366 | INFO     | . stage-out = 3 s
[2025-11-26 20:54:05] 2025-11-27 01:53:14,366 | INFO     | . log creation = 0 s
[2025-11-26 20:54:05] 2025-11-27 01:53:14,366 | INFO     | ..............................
[2025-11-26 20:54:05] 2025-11-27 01:53:14,451 | INFO     | 
[2025-11-26 20:54:05] 2025-11-27 01:53:14,452 | INFO     | job summary report
[2025-11-26 20:54:05] 2025-11-27 01:53:14,452 | INFO     | --------------------------------------------------
[2025-11-26 20:54:05] 2025-11-27 01:53:14,452 | INFO     | PanDA job id: 6897488863
[2025-11-26 20:54:05] 2025-11-27 01:53:14,452 | INFO     | task id: 47556161
[2025-11-26 20:54:05] 2025-11-27 01:53:14,452 | INFO     | errors: (none)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,452 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 20:54:05] 2025-11-27 01:53:14,453 | INFO     | pilot state: finished 
[2025-11-26 20:54:05] 2025-11-27 01:53:14,453 | INFO     | transexitcode: 0
[2025-11-26 20:54:05] 2025-11-27 01:53:14,453 | INFO     | exeerrorcode: 0
[2025-11-26 20:54:05] 2025-11-27 01:53:14,453 | INFO     | exeerrordiag: 
[2025-11-26 20:54:05] 2025-11-27 01:53:14,453 | INFO     | exitcode: 0
[2025-11-26 20:54:05] 2025-11-27 01:53:14,453 | INFO     | exitmsg: OK
[2025-11-26 20:54:05] 2025-11-27 01:53:14,453 | INFO     | cpuconsumptiontime: 300887 s
[2025-11-26 20:54:05] 2025-11-27 01:53:14,453 | INFO     | nevents: 1000
[2025-11-26 20:54:05] 2025-11-27 01:53:14,454 | INFO     | neventsw: 0
[2025-11-26 20:54:05] 2025-11-27 01:53:14,454 | INFO     | pid: 4324
[2025-11-26 20:54:05] 2025-11-27 01:53:14,454 | INFO     | pgrp: 4324
[2025-11-26 20:54:05] 2025-11-27 01:53:14,454 | INFO     | corecount: 12
[2025-11-26 20:54:05] 2025-11-27 01:53:14,454 | INFO     | event service: False
[2025-11-26 20:54:05] 2025-11-27 01:53:14,454 | INFO     | sizes: {0: 2284265, 5: 2284527, 11: 2284583, 26189: 2321959, 26193: 2331009, 26201: 2331199}
[2025-11-26 20:54:05] 2025-11-27 01:53:14,454 | INFO     | --------------------------------------------------
[2025-11-26 20:54:05] 2025-11-27 01:53:14,454 | INFO     | 
[2025-11-26 20:54:05] 2025-11-27 01:53:14,454 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 20:54:05] 2025-11-27 01:53:14,478 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,478 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,478 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,478 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,479 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,479 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,479 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,479 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,479 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,480 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,480 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,480 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,480 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,480 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,480 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,481 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,481 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,481 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,481 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,481 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 20:54:05] 2025-11-27 01:53:14,481 | INFO     | job 6897488863 has completed (purged errors)
[2025-11-26 20:54:05] 2025-11-27 01:53:14,482 | INFO     | overall cleanup function is called
[2025-11-26 20:54:05] 2025-11-27 01:53:15,497 | INFO     | --- collectZombieJob: --- 10, [4324]
[2025-11-26 20:54:05] 2025-11-27 01:53:15,497 | INFO     | zombie collector waiting for pid 4324
[2025-11-26 20:54:05] 2025-11-27 01:53:15,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 20:54:05] 2025-11-27 01:53:15,567 | INFO     | collected zombie processes
[2025-11-26 20:54:05] 2025-11-27 01:53:15,567 | INFO     | will attempt to kill all subprocesses of pid=4324
[2025-11-26 20:54:05] 2025-11-27 01:53:15,658 | INFO     | process IDs to be killed: [4324] (in reverse order)
[2025-11-26 20:54:05] 2025-11-27 01:53:15,709 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 20:54:05] 2025-11-27 01:53:15,709 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 20:54:05] 2025-11-27 01:53:15,713 | INFO     | did not find any defunct processes belonging to 4324
[2025-11-26 20:54:05] 2025-11-27 01:53:15,715 | INFO     | did not find any defunct processes belonging to 4324
[2025-11-26 20:54:05] 2025-11-27 01:53:15,717 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 20:54:05] 2025-11-27 01:53:15,718 | INFO     | ready for new job
[2025-11-26 20:54:05] 2025-11-27 01:53:15,718 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 20:54:05] 2025-11-27 01:53:15,720 | INFO     | ***************************************
[2025-11-26 20:54:05] 2025-11-27 01:53:15,720 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 20:54:05] 2025-11-27 01:53:15,720 | INFO     | ***************************************
[2025-11-26 20:54:05] 2025-11-27 01:53:15,720 | INFO     | 
[2025-11-26 20:54:05] 2025-11-27 01:53:15,721 | INFO     | architecture information:
[2025-11-26 20:54:05] 2025-11-27 01:53:15,722 | INFO     | executing command: cat /etc/os-release
[2025-11-26 20:54:05] 2025-11-27 01:53:15,738 | INFO     | cat /etc/os-release:
[2025-11-26 20:54:05] NAME="CentOS Linux"
[2025-11-26 20:54:05] VERSION="7 (Core)"
[2025-11-26 20:54:05] ID="centos"
[2025-11-26 20:54:05] ID_LIKE="rhel fedora"
[2025-11-26 20:54:05] VERSION_ID="7"
[2025-11-26 20:54:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 20:54:05] ANSI_COLOR="0;31"
[2025-11-26 20:54:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 20:54:05] HOME_URL="https://www.centos.org/"
[2025-11-26 20:54:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 20:54:05] 
[2025-11-26 20:54:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 20:54:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 20:54:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 20:54:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 20:54:05] 
[2025-11-26 20:54:05] 2025-11-27 01:53:15,739 | INFO     | ***************************************
[2025-11-26 20:54:05] 2025-11-27 01:53:16,242 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 20:54:05] 2025-11-27 01:53:16,259 | INFO     | sufficient remaining disk space (28228714496 B)
[2025-11-26 20:54:05] 2025-11-27 01:53:16,260 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 20:54:05] 2025-11-27 01:53:16,260 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 20:54:05] 2025-11-27 01:53:16,260 | INFO     | update_server=False
[2025-11-26 20:54:05] 2025-11-27 01:53:16,260 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 20:54:05] 2025-11-27 01:53:16,261 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:54:05] 2025-11-27 01:53:16,425 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 20:54:05] 2025-11-27 01:53:16,425 | INFO     | aborting loop
[2025-11-26 20:54:05] 2025-11-27 01:53:16,435 | INFO     | all data control threads have been joined
[2025-11-26 20:54:05] 2025-11-27 01:53:16,749 | INFO     | all job control threads have been joined
[2025-11-26 20:54:05] 2025-11-27 01:53:16,806 | INFO     | all payload control threads have been joined
[2025-11-26 20:54:05] 2025-11-27 01:53:17,266 | INFO     | [job] retrieve thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:17,267 | INFO     | [job] queue monitor thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:17,324 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 20:54:05] 2025-11-27 01:53:17,337 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:17,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 20:54:05] 2025-11-27 01:53:17,430 | INFO     | [job] job monitor thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:17,441 | INFO     | [data] control thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:17,755 | INFO     | [job] control thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:17,794 | INFO     | [data] copytool_in thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:17,811 | INFO     | [payload] control thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:17,934 | INFO     | [payload] validate_post thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:18,202 | INFO     | [job] validate thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:18,209 | INFO     | [payload] failed_post thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:18,462 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:18,605 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:18,708 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:19,329 | INFO     | [data] copytool_out thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:21,403 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 20:54:05] 2025-11-27 01:53:45,750 | INFO     | PID=30129 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 20:54:05] 2025-11-27 01:53:45,750 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 20:54:05] 2025-11-27 01:53:45,751 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 20:54:05] 2025-11-27 01:53:45,751 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 20:54:05] 2025-11-27 01:53:59,385 | INFO     | [monitor] cgroup control has ended
[2025-11-26 20:54:05] 2025-11-27 01:53:59,875 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140336559175488)>', '<ExcThread(monitor, started 140335229429504)>']
[2025-11-26 20:54:05] 2025-11-27 01:54:00,817 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 20:54:05] 2025-11-27 01:54:00,817 | INFO     | [monitor] control thread has ended
[2025-11-26 20:54:05] 2025-11-27 01:54:04,886 | INFO     | all workflow threads have been joined
[2025-11-26 20:54:05] 2025-11-27 01:54:04,886 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 20:54:05] 2025-11-27 01:54:04,886 | INFO     | traces error code: 0
[2025-11-26 20:54:05] 2025-11-27 01:54:04,887 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 20:54:05] 2025-11-27 01:54:04,980 [wrapper] ==== pilot stdout END ====
[2025-11-26 20:54:05] 2025-11-27 01:54:04,984 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 20:54:05] 2025-11-27 01:54:04,988 [wrapper] pilotpid: 30129
[2025-11-26 20:54:05] 2025-11-27 01:54:04,992 [wrapper] Pilot exit status: 0
[2025-11-26 20:54:05] 2025-11-27 01:54:05,006 [wrapper] pandaids: 6897488863
[2025-11-26 20:54:05] 2025-11-27 01:54:05,050 [wrapper] cleanup supervisor_pilot 24453 30130
[2025-11-26 20:54:05] 2025-11-27 01:54:05,054 [wrapper] Test setup, not cleaning
[2025-11-26 20:54:05] 2025-11-27 01:54:05,058 [wrapper] apfmon messages muted
[2025-11-26 20:54:05] 2025-11-27 01:54:05,062 [wrapper] ==== wrapper stdout END ====
[2025-11-26 20:54:05] 2025-11-27 01:54:05,065 [wrapper] ==== wrapper stderr END ====
[2025-11-26 20:54:05]  *** Error codes and diagnostics ***
[2025-11-26 20:54:05]     "exeErrorCode": 0,
[2025-11-26 20:54:05]     "exeErrorDiag": "",
[2025-11-26 20:54:05]     "pilotErrorCode": 0,
[2025-11-26 20:54:05]     "pilotErrorDiag": "",
[2025-11-26 20:54:05]  *** Listing of results directory ***
[2025-11-26 20:54:05] total 1329392
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 20:54:05] -rwx------ 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas       100 Nov 26 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 20:54:05] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 13:35 run_atlas
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas       105 Nov 26 13:35 job.xml
[2025-11-26 20:54:05] -rw-r--r-- 2 boincer umatlas 411485965 Nov 26 13:36 EVNT.47483658._002267.pool.root.1
[2025-11-26 20:54:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 13:36 start_atlas.sh
[2025-11-26 20:54:05] drwxrwx--x 2 boincer umatlas      4096 Nov 26 13:36 shared
[2025-11-26 20:54:05] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 13:36 input.tar.gz
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas         0 Nov 26 13:36 boinc_lockfile
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 13:36 pandaJob.out
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas        57 Nov 26 13:36 setup.sh.local
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas    991522 Nov 26 13:36 agis_schedconf.cvmfs.json
[2025-11-26 20:54:05] drwx------ 5 boincer umatlas      4096 Nov 26 13:36 pilot3
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas       533 Nov 26 20:44 boinc_task_state.xml
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas      5955 Nov 26 20:45 init_data.xml
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas 934190409 Nov 26 20:52 HITS.47556161._002506.pool.root.1
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas      1061 Nov 26 20:52 memory_monitor_summary.json
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas   1516240 Nov 26 20:53 agis_ddmendpoints.agis.ALL.json
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas   2189795 Nov 26 20:53 log.47556161._002506.job.log.tgz.1
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas      8678 Nov 26 20:53 heartbeat.json
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas        95 Nov 26 20:53 pilot_heartbeat.json
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 20:53 boinc_mmap_file
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas        29 Nov 26 20:53 wrapper_checkpoint.txt
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas      4746 Nov 26 20:54 pilotlog.txt
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas   3662426 Nov 26 20:54 log.47556161._002506.job.log.1
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas       353 Nov 26 20:54 output.list
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas       620 Nov 26 20:54 runtime_log
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas   5867520 Nov 26 20:54 result.tar.gz
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas      9345 Nov 26 20:54 runtime_log.err
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas       670 Nov 26 20:54 2jTLDmtaBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLZMKDm3k2ddm.diag
[2025-11-26 20:54:05] -rw-r--r-- 1 boincer umatlas     21297 Nov 26 20:54 stderr.txt
[2025-11-26 20:54:05] HITS file was successfully produced:
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas 934190409 Nov 26 20:52 shared/HITS.pool.root.1
[2025-11-26 20:54:05]  *** Contents of shared directory: ***
[2025-11-26 20:54:05] total 1320472
[2025-11-26 20:54:05] -rw-r--r-- 2 boincer umatlas 411485965 Nov 26 13:36 ATLAS.root_0
[2025-11-26 20:54:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 13:36 start_atlas.sh
[2025-11-26 20:54:05] -rw-r--r-- 2 boincer umatlas    590108 Nov 26 13:36 input.tar.gz
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas 934190409 Nov 26 20:52 HITS.pool.root.1
[2025-11-26 20:54:05] -rw------- 1 boincer umatlas   5867520 Nov 26 20:54 result.tar.gz
20:54:06 (26395): run_atlas exited; CPU time 294318.422132
20:54:06 (26395): called boinc_finish(0)

</stderr_txt>
]]>

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