Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-27 18:33:55 (25992): vboxwrapper version 26210
2025-11-27 18:33:55 (25992): BOINC client version: 8.0.2
2025-11-27 18:33:55 (25992): Detected: VirtualBox VboxManage Interface (Version: 7.1.10)
2025-11-27 18:33:56 (25992): Successfully copied 'init_data.xml' to the shared directory.
2025-11-27 18:33:56 (25992): Create VM. (boinc_465427762275bcbd, slot#4)
2025-11-27 18:33:57 (25992): Setting Memory Size for VM. (4800MB)
2025-11-27 18:33:57 (25992): Setting CPU Count for VM. (8)
2025-11-27 18:33:58 (25992): Setting Chipset Options for VM.
2025-11-27 18:33:58 (25992): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-27 18:33:59 (25992): Setting Boot Options for VM.
2025-11-27 18:34:00 (25992): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-27 18:34:01 (25992): Enabling VM Network Access.
2025-11-27 18:34:01 (25992): Disabling USB Support for VM.
2025-11-27 18:34:02 (25992): Disabling COM Port Support for VM.
2025-11-27 18:34:02 (25992): Disabling LPT Port Support for VM.
2025-11-27 18:34:03 (25992): Disabling Audio Support for VM.
2025-11-27 18:34:04 (25992): Disabling Clipboard Support for VM.
2025-11-27 18:34:04 (25992): Disabling Drag and Drop Support for VM.
2025-11-27 18:34:05 (25992): Adding storage controller(s) to VM.
2025-11-27 18:34:05 (25992): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-27 18:34:08 (25992): Attempts: 3
2025-11-27 18:34:09 (25992): Adding VirtualBox Guest Additions to VM.
2025-11-27 18:34:10 (25992): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-27 18:34:10 (25992): forwarding host port 60373 to guest port 80
2025-11-27 18:34:10 (25992): Enabling remote desktop for VM.
2025-11-27 18:34:10 (25992): Required extension pack not installed, remote desktop not enabled.
2025-11-27 18:34:10 (25992): Enabling shared directory for VM.
2025-11-27 18:34:11 (25992): Starting VM using VBoxManage interface. (boinc_465427762275bcbd, slot#4)
2025-11-27 18:34:15 (25992): Successfully started VM. (PID = '376')
2025-11-27 18:34:15 (25992): Reporting VM Process ID to BOINC.
2025-11-27 18:34:15 (25992): Guest Log: BIOS: VirtualBox 7.1.10
2025-11-27 18:34:15 (25992): Guest Log: CPUID EDX: 0x178bfbff
2025-11-27 18:34:15 (25992): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-27 18:34:15 (25992): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-27 18:34:15 (25992): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-27 18:34:15 (25992): Detected: Web Application Enabled (http://localhost:60373)
2025-11-27 18:34:15 (25992): Preference change detected
2025-11-27 18:34:15 (25992): Setting CPU throttle for VM. (100%)
2025-11-27 18:34:15 (25992): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 18:34:17 (25992): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-27 18:34:17 (25992): Guest Log: BIOS: Booting from Hard Disk...
2025-11-27 18:34:20 (25992): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-27 18:34:20 (25992): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-27 18:34:20 (25992): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-27 18:34:33 (25992): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-27 18:34:33 (25992): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-27 18:35:08 (25992): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-27 18:35:08 (25992): Guest Log: 00:00:00.000082 main     Log opened 2025-11-27T18:35:07.851331000Z
2025-11-27 18:35:08 (25992): Guest Log: 00:00:00.000152 main     OS Product: Linux
2025-11-27 18:35:08 (25992): Guest Log: 00:00:00.000164 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-27 18:35:08 (25992): Guest Log: 00:00:00.000173 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-27 18:35:08 (25992): Guest Log: 00:00:00.000183 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-27 18:35:08 (25992): Guest Log: 00:00:00.000183 main     Process ID: 1380
2025-11-27 18:35:08 (25992): Guest Log: 00:00:00.000184 main     Package type: LINUX_64BITS_GENERIC
2025-11-27 18:35:08 (25992): Guest Log: 00:00:00.000608 main     5.2.32 r132073 started. Verbose level = 0
2025-11-27 18:35:12 (25992): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-27 18:35:12 (25992): Guest Log: [INFO] Mounting shared directory
2025-11-27 18:35:12 (25992): Guest Log: [INFO] Checking for init_data.xml
2025-11-27 18:35:18 (25992): Guest Log: 00:00:10.006513 timesync vgsvcTimeSyncWorker: Radical guest time change: -3 599 363 901 000ns (GuestNow=1 764 264 908 488 788 000 ns GuestLast=1 764 268 507 852 689 000 ns fSetTimeLastLoop=true )
2025-11-27 18:36:07 (25992): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-27 18:36:07 (25992): Guest Log: [INFO] Detected branch: prod
2025-11-27 18:36:10 (25992): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-27 18:36:10 (25992): Guest Log: Copying input files
2025-11-27 18:36:12 (25992): Guest Log: Copied input files into RunAtlas.
2025-11-27 18:36:12 (25992): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-27 18:36:12 (25992): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-27 18:36:12 (25992): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-27 18:36:12 (25992): Guest Log: Further information can be found at the LHC@home message board.
2025-11-27 18:37:18 (25992): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-27 18:37:18 (25992): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-27 18:37:18 (25992): Guest Log: 2.6.3.0 1680 1 30172 153377 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-27 18:37:21 (25992): Guest Log: copied the webapp to /var/www
2025-11-27 18:37:21 (25992): Guest Log: ATHENA_PROC_NUMBER=8
2025-11-27 18:37:21 (25992): Guest Log: ATHENA_CORE_NUMBER=8
2025-11-27 18:37:22 (25992): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-27 18:37:22 (25992): Guest Log:  *** Starting ATLAS job. (PandaID=6898177901 taskID=47556161) ***
2025-11-27 20:14:23 (25992): Status Report: Elapsed Time: '6000.000000'
2025-11-27 20:14:23 (25992): Status Report: CPU Time: '30025.296875'
2025-11-27 21:54:28 (25992): Status Report: Elapsed Time: '12000.805468'
2025-11-27 21:54:28 (25992): Status Report: CPU Time: '77095.531250'
2025-11-27 22:33:22 (25992): Preference change detected
2025-11-27 22:33:22 (25992): Setting CPU throttle for VM. (100%)
2025-11-27 22:33:23 (25992): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-27 23:34:49 (25992): Status Report: Elapsed Time: '18001.686413'
2025-11-27 23:34:49 (25992): Status Report: CPU Time: '123907.390625'
2025-11-28 00:39:27 (25992): VM state change detected. (old = 'running', new = 'paused')
2025-11-28 00:48:10 (25992): VM state change detected. (old = 'paused', new = 'running')
2025-11-28 01:23:30 (25992): Status Report: Elapsed Time: '24002.256010'
2025-11-28 01:23:30 (25992): Status Report: CPU Time: '170682.203125'
2025-11-28 01:42:58 (25992): Guest Log:  *** Job finished ***
2025-11-28 01:42:58 (25992): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:41,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:41,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:42,382 | INFO     | [monitor] cgroup control has ended
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:44,473 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139644686292800)>', '<ExcThread(monitor, started 139643806803712)>']
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:44,847 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:44,847 | INFO     | [monitor] control thread has ended
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,501 | INFO     | all workflow threads have been joined
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,501 | INFO     | end of generic workflow (traces error code: 0)
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,501 | INFO     | traces error code: 0
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,917 [wrapper] ==== pilot stdout END ====
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,920 [wrapper] ==== wrapper stdout RESUME ====
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,922 [wrapper] pilotpid: 6165
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,925 [wrapper] Pilot exit status: 0
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,969 [wrapper] pandaids: 6898177901
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,984 [wrapper] cleanup supervisor_pilot  1668 6166
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,987 [wrapper] Test setup, not cleaning
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,989 [wrapper] apfmon messages muted
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,992 [wrapper] ==== wrapper stdout END ====
2025-11-28 01:42:58 (25992): Guest Log: 2025-11-28 00:43:49,994 [wrapper] ==== wrapper stderr END ====
2025-11-28 01:42:58 (25992): Guest Log:  *** Error codes and diagnostics ***
2025-11-28 01:42:58 (25992): Guest Log:     "exeErrorCode": 0,
2025-11-28 01:42:58 (25992): Guest Log:     "exeErrorDiag": "",
2025-11-28 01:42:58 (25992): Guest Log:     "pilotErrorCode": 0,
2025-11-28 01:42:58 (25992): Guest Log:     "pilotErrorDiag": "",
2025-11-28 01:42:58 (25992): Guest Log:  *** Listing of results directory ***
2025-11-28 01:42:58 (25992): Guest Log: total 896640
2025-11-28 01:42:58 (25992): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 26 03:33 pilot3.tar.gz
2025-11-28 01:42:58 (25992): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 26 04:06 queuedata.json
2025-11-28 01:42:58 (25992): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 26 04:06 runpilot2-wrapper.sh
2025-11-28 01:42:58 (25992): Guest Log: -rwxr-xr-x. 1 atlas atlas    590106 Nov 27 17:36 input.tar.gz
2025-11-28 01:42:58 (25992): Guest Log: -rwxr-xr-x. 1 atlas atlas      9131 Nov 27 17:36 init_data.xml
2025-11-28 01:42:58 (25992): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 27 17:36 start_atlas.sh
2025-11-28 01:42:58 (25992): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 27 17:36 EVNT.47483658._002470.pool.root.1 -> /data/./ATLAS.root_0
2025-11-28 01:42:58 (25992): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 27 17:37 pandaJob.out
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas    991231 Nov 27 17:41 agis_schedconf.cvmfs.json
2025-11-28 01:42:58 (25992): Guest Log: drwx------. 5 atlas atlas      4096 Nov 27 17:42 pilot3
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas 904110193 Nov 28 00:42 HITS.47556161._004528.pool.root.1
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas        95 Nov 28 00:42 pilot_heartbeat.json
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas      1038 Nov 28 00:42 memory_monitor_summary.json
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas   1516240 Nov 28 00:43 agis_ddmendpoints.agis.ALL.json
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas   1716962 Nov 28 00:43 log.47556161._004528.job.log.tgz.1
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas      8600 Nov 28 00:43 heartbeat.json
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas      4805 Nov 28 00:43 pilotlog.txt
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas   3384566 Nov 28 00:43 log.47556161._004528.job.log.1
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas       353 Nov 28 00:43 output.list
2025-11-28 01:42:58 (25992): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 28 00:43 runtime_log
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas   5120000 Nov 28 00:43 result.tar.gz
2025-11-28 01:42:58 (25992): Guest Log: -rw-r--r--. 1 atlas atlas      8725 Nov 28 00:43 runtime_log.err
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas       655 Nov 28 00:43 QTKLDmuyLi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHvMKDmF8jgsn.diag
2025-11-28 01:42:58 (25992): Guest Log: Looking for outputfile HITS.47556161._004528.pool.root.1
2025-11-28 01:42:58 (25992): Guest Log: HITS file was successfully produced
2025-11-28 01:42:58 (25992): Guest Log: -rw-------. 1 atlas atlas 904110193 Nov 28 00:42 /home/atlas/RunAtlas/HITS.47556161._004528.pool.root.1
2025-11-28 01:43:03 (25992): Guest Log: Successfully finished the ATLAS job!
2025-11-28 01:43:03 (25992): Guest Log: Copying the results back to the shared directory!
2025-11-28 01:43:03 (25992): Guest Log:  *** Contents of shared directory: ***
2025-11-28 01:43:03 (25992): Guest Log: total 1286104
2025-11-28 01:43:03 (25992): Guest Log: -rwxrwxrwx. 1 root root 407110954 Nov 27 17:33 ATLAS.root_0
2025-11-28 01:43:03 (25992): Guest Log: -rwxrwxrwx. 1 root root 904110193 Nov 28 00:43 HITS.pool.root.1
2025-11-28 01:43:03 (25992): Guest Log: -rwxrwxrwx. 1 root root      9131 Nov 27 17:33 init_data.xml
2025-11-28 01:43:03 (25992): Guest Log: -rwxrwxrwx. 1 root root    590106 Nov 26 17:42 input.tar.gz
2025-11-28 01:43:03 (25992): Guest Log: -rwxrwxrwx. 1 root root   5120000 Nov 28 00:43 result.tar.gz
2025-11-28 01:43:03 (25992): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 26 17:42 start_atlas.sh
2025-11-28 01:43:03 (25992): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-28 01:43:03 (25992): VM Completion File Detected.
2025-11-28 01:43:03 (25992): Powering off VM.
2025-11-28 01:43:04 (25992): Successfully stopped VM.
2025-11-28 01:43:04 (25992): Deregistering VM. (boinc_465427762275bcbd, slot#4)
2025-11-28 01:43:04 (25992): Removing network bandwidth throttle group from VM.
2025-11-28 01:43:04 (25992): Removing VM from VirtualBox.
2025-11-28 01:43:10 (25992): called boinc_finish(0)

</stderr_txt>
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