Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:40:16 (3350311): wrapper (7.7.26015): starting
14:40:16 (3350311): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 14:40:16] Arguments: --nthreads 8
[2025-11-26 14:40:16] Threads: 8
[2025-11-26 14:40:16] Checking for CVMFS
[2025-11-26 14:40:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 14:40:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 14:40:17] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 14:40:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 14:40:17] 2.13.3.0 10982 30483 335104 153333 1 170 38555330 40960001 27303 16776704 0 151104239 99.697 119366054 39266 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 14:40:17] CVMFS is ok
[2025-11-26 14:40:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 14:40:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 14:40:17] Further information can be found at the LHC@home message board.
[2025-11-26 14:40:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 14:40:17] Checking for apptainer binary...
[2025-11-26 14:40:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 14:40:17] Running /usr/bin/apptainer --version
[2025-11-26 14:40:17] apptainer version 1.4.4-1.el9
[2025-11-26 14:40:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 14:40:17] c6-8-12-3.aglt2.org
[2025-11-26 14:40:17] apptainer works
[2025-11-26 14:40:17] Set ATHENA_PROC_NUMBER=8
[2025-11-26 14:40:17] Set ATHENA_CORE_NUMBER=8
[2025-11-26 14:40:18] Starting ATLAS job with PandaID=6891592400
[2025-11-26 14:40:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 06:15:42]  *** The last 200 lines of the pilot log: ***
[2025-11-27 06:16:03] 2025-11-27 11:15:06,532 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 06:16:03] 2025-11-27 11:15:08,444 | INFO     | time since job start (56066s) is within the limit (172800.0s)
[2025-11-27 06:16:03] 2025-11-27 11:15:08,785 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 06:16:03] 2025-11-27 11:15:08,788 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3065.8588214285714
[2025-11-27 06:16:03] 2025-11-27 11:15:08,798 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6891592400/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 06:16:03] 2025-11-27 11:15:08,799 | INFO     | extracted standard info from prmon json
[2025-11-27 06:16:03] 2025-11-27 11:15:08,799 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 06:16:03] 2025-11-27 11:15:08,799 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 06:16:03] 2025-11-27 11:15:08,814 | INFO     | fitting pss+swap vs Time
[2025-11-27 06:16:03] 2025-11-27 11:15:08,816 | INFO     | sum of square deviations: 239892679499.1689
[2025-11-27 06:16:03] 2025-11-27 11:15:08,830 | INFO     | sum of deviations: 1844120528062.2942
[2025-11-27 06:16:03] 2025-11-27 11:15:08,831 | INFO     | mean x: 1764214063.0446622
[2025-11-27 06:16:03] 2025-11-27 11:15:08,831 | INFO     | mean y: 2957306.529411765
[2025-11-27 06:16:03] 2025-11-27 11:15:08,831 | INFO     | intersect: -13559037900.44863
[2025-11-27 06:16:03] 2025-11-27 11:15:08,832 | INFO     | chi2: 5.024517660738404
[2025-11-27 06:16:03] 2025-11-27 11:15:08,833 | INFO     | sum of square deviations: 235994703999.67435
[2025-11-27 06:16:03] 2025-11-27 11:15:08,847 | INFO     | sum of deviations: 2120582976336.3323
[2025-11-27 06:16:03] 2025-11-27 11:15:08,847 | INFO     | mean x: 1764213910.5531216
[2025-11-27 06:16:03] 2025-11-27 11:15:08,847 | INFO     | mean y: 2968118.147864184
[2025-11-27 06:16:03] 2025-11-27 11:15:08,848 | INFO     | intersect: -15849768921.831902
[2025-11-27 06:16:03] 2025-11-27 11:15:08,849 | INFO     | chi2: 2.5138733817282253
[2025-11-27 06:16:03] 2025-11-27 11:15:08,849 | INFO     | current chi2=2.5138733817282253 (change=49.967866540272325 %)
[2025-11-27 06:16:03] 2025-11-27 11:15:08,850 | INFO     | sum of square deviations: 232139083396.78873
[2025-11-27 06:16:03] 2025-11-27 11:15:08,864 | INFO     | sum of deviations: 2160435536017.6985
[2025-11-27 06:16:03] 2025-11-27 11:15:08,864 | INFO     | mean x: 1764213758.0594714
[2025-11-27 06:16:03] 2025-11-27 11:15:08,865 | INFO     | mean y: 2969688.209251101
[2025-11-27 06:16:03] 2025-11-27 11:15:08,865 | INFO     | intersect: -16415937633.51983
[2025-11-27 06:16:03] 2025-11-27 11:15:08,866 | INFO     | chi2: 2.3124524491544833
[2025-11-27 06:16:03] 2025-11-27 11:15:08,866 | INFO     | current chi2=2.3124524491544833 (change=8.012373814757133 %)
[2025-11-27 06:16:03] 2025-11-27 11:15:08,866 | INFO     | right removable region: 907
[2025-11-27 06:16:03] 2025-11-27 11:15:08,867 | INFO     | sum of square deviations: 235993839019.67453
[2025-11-27 06:16:03] 2025-11-27 11:15:08,881 | INFO     | sum of deviations: 1585733050645.63
[2025-11-27 06:16:03] 2025-11-27 11:15:08,881 | INFO     | mean x: 1764214215.5531216
[2025-11-27 06:16:03] 2025-11-27 11:15:08,881 | INFO     | mean y: 2967401.234392114
[2025-11-27 06:16:03] 2025-11-27 11:15:08,882 | INFO     | intersect: -11851464060.377655
[2025-11-27 06:16:03] 2025-11-27 11:15:08,883 | INFO     | chi2: 2.870741658026741
[2025-11-27 06:16:03] 2025-11-27 11:15:08,883 | INFO     | current chi2=2.870741658026741 (change=42.86532853772761 %)
[2025-11-27 06:16:03] 2025-11-27 11:15:08,884 | INFO     | sum of square deviations: 232137686989.02237
[2025-11-27 06:16:03] 2025-11-27 11:15:08,898 | INFO     | sum of deviations: 1527589101930.8604
[2025-11-27 06:16:03] 2025-11-27 11:15:08,898 | INFO     | mean x: 1764214368.0572686
[2025-11-27 06:16:03] 2025-11-27 11:15:08,898 | INFO     | mean y: 2969699.7334801764
[2025-11-27 06:16:03] 2025-11-27 11:15:08,898 | INFO     | intersect: -11606496548.810505
[2025-11-27 06:16:03] 2025-11-27 11:15:08,899 | INFO     | chi2: 2.838842581669665
[2025-11-27 06:16:03] 2025-11-27 11:15:08,899 | INFO     | current chi2=2.838842581669665 (change=1.1111789271557906 %)
[2025-11-27 06:16:03] 2025-11-27 11:15:08,899 | INFO     | left removable region: 20
[2025-11-27 06:16:03] 2025-11-27 11:15:08,900 | INFO     | sum of square deviations: 216401789450.14648
[2025-11-27 06:16:03] 2025-11-27 11:15:08,914 | INFO     | sum of deviations: 1770683514965.7202
[2025-11-27 06:16:03] 2025-11-27 11:15:08,914 | INFO     | mean x: 1764214337.5794814
[2025-11-27 06:16:03] 2025-11-27 11:15:08,914 | INFO     | mean y: 2984986.4791431795
[2025-11-27 06:16:03] 2025-11-27 11:15:08,914 | INFO     | intersect: -14432502133.824062
[2025-11-27 06:16:03] 2025-11-27 11:15:08,915 | INFO     | chi2: 0.11088906006831895
[2025-11-27 06:16:03] 2025-11-27 11:15:08,915 | INFO     | current memory leak: 8.18 B/s (using 887 data points, chi2=0.11)
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | could have reported an average CPU frequency of 3018 MHz (34 samples)
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | ..............................
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | . Timing measurements:
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | . get job = 0 s
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | . initial setup = 3 s
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | . payload setup = 13 s
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | . stage-in = 0 s
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | . payload execution = 56009 s
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | . stage-out = 4 s
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | . log creation = 0 s
[2025-11-27 06:16:03] 2025-11-27 11:15:08,917 | INFO     | ..............................
[2025-11-27 06:16:03] 2025-11-27 11:15:09,441 | INFO     | 
[2025-11-27 06:16:03] 2025-11-27 11:15:09,441 | INFO     | job summary report
[2025-11-27 06:16:03] 2025-11-27 11:15:09,441 | INFO     | --------------------------------------------------
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | PanDA job id: 6891592400
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | task id: 47493068
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | errors: (none)
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | pilot state: finished 
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | transexitcode: 0
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | exeerrorcode: 0
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | exeerrordiag: 
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | exitcode: 0
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | exitmsg: OK
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | cpuconsumptiontime: 230584 s
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | nevents: 1000
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | neventsw: 0
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | pid: 3368992
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | pgrp: 3368992
[2025-11-27 06:16:03] 2025-11-27 11:15:09,442 | INFO     | corecount: 8
[2025-11-27 06:16:03] 2025-11-27 11:15:09,443 | INFO     | event service: False
[2025-11-27 06:16:03] 2025-11-27 11:15:09,443 | INFO     | sizes: {0: 2284077, 1: 2284332, 11: 2284594, 12: 2284622, 56026: 2336002, 56027: 2336001, 56031: 2345179, 56033: 2345235, 56043: 2345481}
[2025-11-27 06:16:03] 2025-11-27 11:15:09,443 | INFO     | --------------------------------------------------
[2025-11-27 06:16:03] 2025-11-27 11:15:09,443 | INFO     | 
[2025-11-27 06:16:03] 2025-11-27 11:15:09,443 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-11-27 06:16:03] 2025-11-27 11:15:09,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,466 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,466 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,466 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,466 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,466 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,466 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,466 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,466 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 06:16:03] 2025-11-27 11:15:09,467 | INFO     | job 6891592400 has completed (purged errors)
[2025-11-27 06:16:03] 2025-11-27 11:15:09,468 | INFO     | overall cleanup function is called
[2025-11-27 06:16:03] 2025-11-27 11:15:10,483 | INFO     | --- collectZombieJob: --- 10, [3368992]
[2025-11-27 06:16:03] 2025-11-27 11:15:10,483 | INFO     | zombie collector waiting for pid 3368992
[2025-11-27 06:16:03] 2025-11-27 11:15:10,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 06:16:03] 2025-11-27 11:15:10,484 | INFO     | collected zombie processes
[2025-11-27 06:16:03] 2025-11-27 11:15:10,484 | INFO     | will attempt to kill all subprocesses of pid=3368992
[2025-11-27 06:16:03] 2025-11-27 11:15:10,911 | INFO     | process IDs to be killed: [3368992] (in reverse order)
[2025-11-27 06:16:03] 2025-11-27 11:15:11,109 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 06:16:03] 2025-11-27 11:15:11,109 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 06:16:03] 2025-11-27 11:15:11,143 | INFO     | did not find any defunct processes belonging to 3368992
[2025-11-27 06:16:03] 2025-11-27 11:15:11,182 | INFO     | did not find any defunct processes belonging to 3368992
[2025-11-27 06:16:03] 2025-11-27 11:15:11,188 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 06:16:03] 2025-11-27 11:15:11,189 | INFO     | ready for new job
[2025-11-27 06:16:03] 2025-11-27 11:15:11,189 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 06:16:03] 2025-11-27 11:15:11,235 | INFO     | ***************************************
[2025-11-27 06:16:03] 2025-11-27 11:15:11,236 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 06:16:03] 2025-11-27 11:15:11,236 | INFO     | ***************************************
[2025-11-27 06:16:03] 2025-11-27 11:15:11,236 | INFO     | 
[2025-11-27 06:16:03] 2025-11-27 11:15:11,274 | INFO     | architecture information:
[2025-11-27 06:16:03] 2025-11-27 11:15:11,275 | INFO     | executing command: cat /etc/os-release
[2025-11-27 06:16:03] 2025-11-27 11:15:11,303 | INFO     | cat /etc/os-release:
[2025-11-27 06:16:03] NAME="CentOS Linux"
[2025-11-27 06:16:03] VERSION="7 (Core)"
[2025-11-27 06:16:03] ID="centos"
[2025-11-27 06:16:03] ID_LIKE="rhel fedora"
[2025-11-27 06:16:03] VERSION_ID="7"
[2025-11-27 06:16:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 06:16:03] ANSI_COLOR="0;31"
[2025-11-27 06:16:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 06:16:03] HOME_URL="https://www.centos.org/"
[2025-11-27 06:16:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 06:16:03] 
[2025-11-27 06:16:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 06:16:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 06:16:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 06:16:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 06:16:03] 
[2025-11-27 06:16:03] 2025-11-27 11:15:11,304 | INFO     | ***************************************
[2025-11-27 06:16:03] 2025-11-27 11:15:11,820 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-11-27 06:16:03] 2025-11-27 11:15:11,893 | INFO     | sufficient remaining disk space (50593792000 B)
[2025-11-27 06:16:03] 2025-11-27 11:15:11,894 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 06:16:03] 2025-11-27 11:15:11,894 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 06:16:03] 2025-11-27 11:15:11,894 | INFO     | update_server=False
[2025-11-27 06:16:03] 2025-11-27 11:15:11,895 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 06:16:03] 2025-11-27 11:15:11,920 | INFO     | all payload control threads have been joined
[2025-11-27 06:16:03] 2025-11-27 11:15:12,331 | INFO     | all data control threads have been joined
[2025-11-27 06:16:03] 2025-11-27 11:15:12,547 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:16:03] 2025-11-27 11:15:12,548 | INFO     | aborting loop
[2025-11-27 06:16:03] 2025-11-27 11:15:12,900 | INFO     | [job] retrieve thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:12,925 | INFO     | [payload] control thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:13,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 06:16:03] 2025-11-27 11:15:13,201 | INFO     | [payload] validate_post thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:13,277 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:13,278 | INFO     | [data] copytool_in thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:13,279 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:13,337 | INFO     | [data] control thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:13,503 | INFO     | all job control threads have been joined
[2025-11-27 06:16:03] 2025-11-27 11:15:13,554 | INFO     | [job] job monitor thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:13,647 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:13,965 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 06:16:03] 2025-11-27 11:15:14,020 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 06:16:03] 2025-11-27 11:15:14,283 | INFO     | [payload] failed_post thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:14,364 | INFO     | [job] validate thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:14,367 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:14,509 | INFO     | [job] control thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:15,025 | INFO     | [job] queue monitor thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:15,082 | INFO     | [data] copytool_out thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:17,971 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 06:16:03] 2025-11-27 11:15:20,582 | INFO     | [monitor] cgroup control has ended
[2025-11-27 06:16:03] 2025-11-27 11:15:20,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140228392384320)>', '<ExcThread(monitor, started 140227897177856)>']
[2025-11-27 06:16:03] 2025-11-27 11:15:25,751 | INFO     | all workflow threads have been joined
[2025-11-27 06:16:03] 2025-11-27 11:15:25,751 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 06:16:03] 2025-11-27 11:15:25,752 | INFO     | traces error code: 0
[2025-11-27 06:16:03] 2025-11-27 11:15:25,752 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 06:16:03] 2025-11-27 11:15:42,217 | INFO     | PID=3356588 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 06:16:03] 2025-11-27 11:15:42,217 | INFO     | .. there are 39 such processes running
[2025-11-27 06:16:03] 2025-11-27 11:15:42,218 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 06:16:03] 2025-11-27 11:15:42,218 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 06:16:03] 2025-11-27 11:15:42,218 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 06:16:03] 2025-11-27 11:15:42,218 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 06:16:03] 2025-11-27 11:15:42,218 | CRITICAL | thread 'MainThread' is not alive
[2025-11-27 06:16:03] 2025-11-27 11:15:42,218 | INFO     | [monitor] control thread has ended
[2025-11-27 06:16:03] 2025-11-27 11:15:42,418 [wrapper] ==== pilot stdout END ====
[2025-11-27 06:16:03] 2025-11-27 11:15:42,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 06:16:03] 2025-11-27 11:15:42,424 [wrapper] pilotpid: 3356588
[2025-11-27 06:16:03] 2025-11-27 11:15:42,427 [wrapper] Pilot exit status: 0
[2025-11-27 06:16:03] 2025-11-27 11:15:42,445 [wrapper] pandaids: 6891592400
[2025-11-27 06:16:03] 2025-11-27 11:15:42,595 [wrapper] cleanup supervisor_pilot 3058973 3356589
[2025-11-27 06:16:03] 2025-11-27 11:15:42,626 [wrapper] Test setup, not cleaning
[2025-11-27 06:16:03] 2025-11-27 11:15:42,645 [wrapper] apfmon messages muted
[2025-11-27 06:16:03] 2025-11-27 11:15:42,669 [wrapper] ==== wrapper stdout END ====
[2025-11-27 06:16:03] 2025-11-27 11:15:42,684 [wrapper] ==== wrapper stderr END ====
[2025-11-27 06:16:03]  *** Error codes and diagnostics ***
[2025-11-27 06:16:03]     "exeErrorCode": 0,
[2025-11-27 06:16:03]     "exeErrorDiag": "",
[2025-11-27 06:16:03]     "pilotErrorCode": 0,
[2025-11-27 06:16:03]     "pilotErrorDiag": "",
[2025-11-27 06:16:03]  *** Listing of results directory ***
[2025-11-27 06:16:03] total 1322068
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 12:59 pilot3.tar.gz
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 13:23 queuedata.json
[2025-11-27 06:16:03] -rwx------. 1 boincer umatlas     36292 Nov 18 13:23 runpilot2-wrapper.sh
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas       100 Nov 26 14:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 06:16:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 14:40 run_atlas
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas       105 Nov 26 14:40 job.xml
[2025-11-27 06:16:03] -rw-r--r--. 2 boincer umatlas 410300089 Nov 26 14:40 EVNT.47493065._000646.pool.root.1
[2025-11-27 06:16:03] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 14:40 start_atlas.sh
[2025-11-27 06:16:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 14:40 shared
[2025-11-27 06:16:03] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 14:40 input.tar.gz
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas         0 Nov 26 14:40 boinc_lockfile
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 14:40 pandaJob.out
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas    991522 Nov 26 14:40 agis_schedconf.cvmfs.json
[2025-11-27 06:16:03] drwx------. 5 boincer umatlas      4096 Nov 26 14:40 pilot3
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas       533 Nov 27 06:05 boinc_task_state.xml
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas      6844 Nov 27 06:11 init_data.xml
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas 920946284 Nov 27 06:14 HITS.47493068._005953.pool.root.1
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas        95 Nov 27 06:14 pilot_heartbeat.json
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas      1058 Nov 27 06:14 memory_monitor_summary.json
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas   1516240 Nov 27 06:14 agis_ddmendpoints.agis.ALL.json
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas   2088299 Nov 27 06:14 log.47493068._005953.job.log.tgz.1
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas      8622 Nov 27 06:15 heartbeat.json
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas       893 Nov 27 06:15 pilotlog.txt
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas   7232873 Nov 27 06:15 log.47493068._005953.job.log.1
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas       353 Nov 27 06:15 output.list
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas       620 Nov 27 06:15 runtime_log
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas   9338880 Nov 27 06:15 result.tar.gz
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas      8709 Nov 27 06:15 runtime_log.err
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas       661 Nov 27 06:15 lvkKDm3Xff8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsEGKDmp0Ofpm.diag
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas        29 Nov 27 06:15 wrapper_checkpoint.txt
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 06:16 boinc_mmap_file
[2025-11-27 06:16:03] -rw-r--r--. 1 boincer umatlas     21342 Nov 27 06:16 stderr.txt
[2025-11-27 06:16:03] HITS file was successfully produced:
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas 920946284 Nov 27 06:14 shared/HITS.pool.root.1
[2025-11-27 06:16:03]  *** Contents of shared directory: ***
[2025-11-27 06:16:03] total 1309772
[2025-11-27 06:16:03] -rw-r--r--. 2 boincer umatlas 410300089 Nov 26 14:40 ATLAS.root_0
[2025-11-27 06:16:03] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 14:40 start_atlas.sh
[2025-11-27 06:16:03] -rw-r--r--. 2 boincer umatlas    590096 Nov 26 14:40 input.tar.gz
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas 920946284 Nov 27 06:14 HITS.pool.root.1
[2025-11-27 06:16:03] -rw-------. 1 boincer umatlas   9338880 Nov 27 06:15 result.tar.gz
06:16:05 (3350311): run_atlas exited; CPU time 232241.106359
06:16:05 (3350311): called boinc_finish(0)

</stderr_txt>
]]>

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