Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:01:58 (1406179): wrapper (7.7.26015): starting
19:01:58 (1406179): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 19:01:58] Arguments: --nthreads 8
[2025-11-26 19:01:58] Threads: 8
[2025-11-26 19:01:58] Checking for CVMFS
[2025-11-26 19:01:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 19:01:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 19:01:59] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 19:02:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 19:02:00] 2.13.3.0 11416 30697 357500 153340 3 789 31667970 32935937 49063 16776704 0 267069289 99.623 252936306 36769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 19:02:00] CVMFS is ok
[2025-11-26 19:02:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 19:02:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 19:02:00] Further information can be found at the LHC@home message board.
[2025-11-26 19:02:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 19:02:00] Checking for apptainer binary...
[2025-11-26 19:02:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 19:02:00] Running /usr/bin/apptainer --version
[2025-11-26 19:02:00] apptainer version 1.4.4-1.el9
[2025-11-26 19:02:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 19:02:00] c7-2-16.aglt2.org
[2025-11-26 19:02:00] apptainer works
[2025-11-26 19:02:00] Set ATHENA_PROC_NUMBER=8
[2025-11-26 19:02:00] Set ATHENA_CORE_NUMBER=8
[2025-11-26 19:02:00] Starting ATLAS job with PandaID=6897531607
[2025-11-26 19:02:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:37:17]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:37:17] 2025-11-27 10:30:29,256 | INFO     | preparing for final server update for job 6897531607 in state='finished'
[2025-11-27 05:37:17] 2025-11-27 10:30:29,257 | INFO     | this job has now completed (state=finished)
[2025-11-27 05:37:17] 2025-11-27 10:30:29,257 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-27 05:37:17] 2025-11-27 10:30:29,257 | INFO     | log transfer has been attempted: DONE
[2025-11-27 05:37:17] 2025-11-27 10:30:29,257 | INFO     | job 6897531607 has finished - writing final server update
[2025-11-27 05:37:17] 2025-11-27 10:30:29,257 | INFO     | total number of processed events: 1000 (read)
[2025-11-27 05:37:17] 2025-11-27 10:30:29,263 | INFO     | executing command: lscpu
[2025-11-27 05:37:17] 2025-11-27 10:30:29,345 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-27 05:37:17] 2025-11-27 10:30:30,174 | INFO     | monitor loop #2388: job 0:6897531607 is in state 'finished'
[2025-11-27 05:37:17] 2025-11-27 10:30:30,174 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:37:17] 2025-11-27 10:30:30,359 | INFO     | time since job start (37666s) is within the limit (172800.0s)
[2025-11-27 05:37:17] 2025-11-27 10:30:32,364 | INFO     | time since job start (37668s) is within the limit (172800.0s)
[2025-11-27 05:37:17] 2025-11-27 10:30:32,679 | INFO     | monitor loop #2389: job 0:6897531607 is in state 'finished'
[2025-11-27 05:37:17] 2025-11-27 10:30:32,679 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:37:17] 2025-11-27 10:30:34,370 | INFO     | time since job start (37670s) is within the limit (172800.0s)
[2025-11-27 05:37:17] 2025-11-27 10:30:34,921 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 05:37:17] 2025-11-27 10:30:34,926 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3198.8503958333336
[2025-11-27 05:37:17] 2025-11-27 10:30:34,938 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897531607/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:37:17] 2025-11-27 10:30:34,939 | INFO     | extracted standard info from prmon json
[2025-11-27 05:37:17] 2025-11-27 10:30:34,939 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:37:17] 2025-11-27 10:30:34,939 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:37:17] 2025-11-27 10:30:34,946 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:37:17] 2025-11-27 10:30:34,947 | INFO     | sum of square deviations: 72830872043.06004
[2025-11-27 05:37:17] 2025-11-27 10:30:34,953 | INFO     | sum of deviations: 6696201761970.606
[2025-11-27 05:37:17] 2025-11-27 10:30:34,954 | INFO     | mean x: 1764220618.2479742
[2025-11-27 05:37:17] 2025-11-27 10:30:34,954 | INFO     | mean y: 3854699.0810372774
[2025-11-27 05:37:17] 2025-11-27 10:30:34,954 | INFO     | intersect: -162201771583.03152
[2025-11-27 05:37:17] 2025-11-27 10:30:34,954 | INFO     | chi2: 15.54859441138229
[2025-11-27 05:37:17] 2025-11-27 10:30:34,955 | INFO     | sum of square deviations: 71074550892.75
[2025-11-27 05:37:17] 2025-11-27 10:30:34,961 | INFO     | sum of deviations: 6951884968856.751
[2025-11-27 05:37:17] 2025-11-27 10:30:34,961 | INFO     | mean x: 1764220465.75
[2025-11-27 05:37:17] 2025-11-27 10:30:34,961 | INFO     | mean y: 3876871.887254902
[2025-11-27 05:37:17] 2025-11-27 10:30:34,961 | INFO     | intersect: -172556590743.36353
[2025-11-27 05:37:17] 2025-11-27 10:30:34,962 | INFO     | chi2: 12.419361711032598
[2025-11-27 05:37:17] 2025-11-27 10:30:34,962 | INFO     | current chi2=12.419361711032598 (change=20.125502135800446 %)
[2025-11-27 05:37:17] 2025-11-27 10:30:34,962 | INFO     | right removable region: 611
[2025-11-27 05:37:17] 2025-11-27 10:30:34,963 | INFO     | sum of square deviations: 71074494955.24826
[2025-11-27 05:37:17] 2025-11-27 10:30:34,969 | INFO     | sum of deviations: 6460152752941.788
[2025-11-27 05:37:17] 2025-11-27 10:30:34,969 | INFO     | mean x: 1764220770.748366
[2025-11-27 05:37:17] 2025-11-27 10:30:34,969 | INFO     | mean y: 3875158.2843137253
[2025-11-27 05:37:17] 2025-11-27 10:30:34,969 | INFO     | intersect: -160350914223.24133
[2025-11-27 05:37:17] 2025-11-27 10:30:34,970 | INFO     | chi2: 13.678712488061356
[2025-11-27 05:37:17] 2025-11-27 10:30:34,970 | INFO     | current chi2=13.678712488061356 (change=12.02605119053137 %)
[2025-11-27 05:37:17] 2025-11-27 10:30:34,970 | INFO     | left removable region: 10
[2025-11-27 05:37:17] 2025-11-27 10:30:34,970 | INFO     | sum of square deviations: 67310366673.55747
[2025-11-27 05:37:17] 2025-11-27 10:30:34,976 | INFO     | sum of deviations: 6593572183812.837
[2025-11-27 05:37:17] 2025-11-27 10:30:34,976 | INFO     | mean x: 1764220740.2529118
[2025-11-27 05:37:17] 2025-11-27 10:30:34,976 | INFO     | mean y: 3907315.81031614
[2025-11-27 05:37:17] 2025-11-27 10:30:34,976 | INFO     | intersect: -172815189859.11365
[2025-11-27 05:37:17] 2025-11-27 10:30:34,977 | INFO     | chi2: 10.221109119329027
[2025-11-27 05:37:17] 2025-11-27 10:30:34,977 | INFO     | current memory leak: 97.96 B/s (using 601 data points, chi2=10.22)
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | could have reported an average CPU frequency of 3121 MHz (24 samples)
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | ..............................
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | . Timing measurements:
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | . get job = 0 s
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | . initial setup = 3 s
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | . payload setup = 14 s
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | . stage-in = 0 s
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | . payload execution = 37599 s
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | . stage-out = 3 s
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | . log creation = 0 s
[2025-11-27 05:37:17] 2025-11-27 10:30:34,978 | INFO     | ..............................
[2025-11-27 05:37:17] 2025-11-27 10:30:35,050 | INFO     | 
[2025-11-27 05:37:17] 2025-11-27 10:30:35,050 | INFO     | job summary report
[2025-11-27 05:37:17] 2025-11-27 10:30:35,050 | INFO     | --------------------------------------------------
[2025-11-27 05:37:17] 2025-11-27 10:30:35,050 | INFO     | PanDA job id: 6897531607
[2025-11-27 05:37:17] 2025-11-27 10:30:35,050 | INFO     | task id: 47556161
[2025-11-27 05:37:17] 2025-11-27 10:30:35,050 | INFO     | errors: (none)
[2025-11-27 05:37:17] 2025-11-27 10:30:35,050 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:37:17] 2025-11-27 10:30:35,050 | INFO     | pilot state: finished 
[2025-11-27 05:37:17] 2025-11-27 10:30:35,050 | INFO     | transexitcode: 0
[2025-11-27 05:37:17] 2025-11-27 10:30:35,050 | INFO     | exeerrorcode: 0
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | exeerrordiag: 
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | exitcode: 0
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | exitmsg: OK
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | cpuconsumptiontime: 194859 s
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | nevents: 1000
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | neventsw: 0
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | pid: 1446335
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | pgrp: 1446335
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | corecount: 8
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | event service: False
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | sizes: {0: 2284094, 1: 2284293, 12: 2284293, 23: 2284611, 33: 2284611, 37617: 2328183, 37618: 2328310, 37621: 2337360, 37624: 2337416, 37631: 2337662}
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | --------------------------------------------------
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | 
[2025-11-27 05:37:17] 2025-11-27 10:30:35,051 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 05:37:17] 2025-11-27 10:30:35,070 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,070 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,070 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,070 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,071 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:37:17] 2025-11-27 10:30:35,072 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,072 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:37:17] 2025-11-27 10:30:35,072 | INFO     | job 6897531607 has completed (purged errors)
[2025-11-27 05:37:17] 2025-11-27 10:30:35,072 | INFO     | overall cleanup function is called
[2025-11-27 05:37:17] 2025-11-27 10:30:36,090 | INFO     | --- collectZombieJob: --- 10, [1446335]
[2025-11-27 05:37:17] 2025-11-27 10:30:36,090 | INFO     | zombie collector waiting for pid 1446335
[2025-11-27 05:37:17] 2025-11-27 10:30:36,090 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:37:17] 2025-11-27 10:30:36,090 | INFO     | collected zombie processes
[2025-11-27 05:37:17] 2025-11-27 10:30:36,090 | INFO     | will attempt to kill all subprocesses of pid=1446335
[2025-11-27 05:37:17] 2025-11-27 10:30:36,804 | INFO     | process IDs to be killed: [1446335] (in reverse order)
[2025-11-27 05:37:17] 2025-11-27 10:30:37,007 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:37:17] 2025-11-27 10:30:37,007 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:37:17] 2025-11-27 10:30:37,037 | INFO     | did not find any defunct processes belonging to 1446335
[2025-11-27 05:37:17] 2025-11-27 10:30:37,066 | INFO     | did not find any defunct processes belonging to 1446335
[2025-11-27 05:37:17] 2025-11-27 10:30:37,068 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:37:17] 2025-11-27 10:30:37,068 | INFO     | ready for new job
[2025-11-27 05:37:17] 2025-11-27 10:30:37,068 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:37:17] 2025-11-27 10:30:37,071 | INFO     | ***************************************
[2025-11-27 05:37:17] 2025-11-27 10:30:37,071 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:37:17] 2025-11-27 10:30:37,071 | INFO     | ***************************************
[2025-11-27 05:37:17] 2025-11-27 10:30:37,071 | INFO     | 
[2025-11-27 05:37:17] 2025-11-27 10:30:37,077 | INFO     | architecture information:
[2025-11-27 05:37:17] 2025-11-27 10:30:37,081 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:37:17] 2025-11-27 10:30:37,099 | INFO     | cat /etc/os-release:
[2025-11-27 05:37:17] NAME="CentOS Linux"
[2025-11-27 05:37:17] VERSION="7 (Core)"
[2025-11-27 05:37:17] ID="centos"
[2025-11-27 05:37:17] ID_LIKE="rhel fedora"
[2025-11-27 05:37:17] VERSION_ID="7"
[2025-11-27 05:37:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:37:17] ANSI_COLOR="0;31"
[2025-11-27 05:37:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:37:17] HOME_URL="https://www.centos.org/"
[2025-11-27 05:37:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:37:17] 
[2025-11-27 05:37:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:37:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:37:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:37:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:37:17] 
[2025-11-27 05:37:17] 2025-11-27 10:30:37,099 | INFO     | ***************************************
[2025-11-27 05:37:17] 2025-11-27 10:30:37,606 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 05:37:17] 2025-11-27 10:30:37,631 | INFO     | sufficient remaining disk space (64453869568 B)
[2025-11-27 05:37:17] 2025-11-27 10:30:37,631 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:37:17] 2025-11-27 10:30:37,632 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:37:17] 2025-11-27 10:30:37,632 | INFO     | update_server=False
[2025-11-27 05:37:17] 2025-11-27 10:30:37,632 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:37:17] 2025-11-27 10:30:37,694 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-27 05:37:17] 2025-11-27 10:30:37,694 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-27 05:37:17] 2025-11-27 10:30:37,694 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:37:17] 2025-11-27 10:30:37,695 | INFO     | will abort loop
[2025-11-27 05:37:17] 2025-11-27 10:30:38,399 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:37:17] 2025-11-27 10:30:38,503 | INFO     | all data control threads have been joined
[2025-11-27 05:37:17] 2025-11-27 10:30:38,640 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:38,641 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:38,701 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:38,723 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:38,767 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:38,912 | INFO     | [job] validate thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:39,005 | INFO     | all payload control threads have been joined
[2025-11-27 05:37:17] 2025-11-27 10:30:39,020 | INFO     | all job control threads have been joined
[2025-11-27 05:37:17] 2025-11-27 10:30:39,033 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:37:17] 2025-11-27 10:30:39,139 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:39,262 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:39,513 | INFO     | [data] control thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:39,643 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:39,905 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:40,017 | INFO     | [payload] control thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:40,026 | INFO     | [job] control thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:40,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:37:17] 2025-11-27 10:30:40,406 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:41,073 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:43,044 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:37:17] 2025-11-27 10:30:48,144 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:37:17] 2025-11-27 10:30:48,382 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140622826149696)>', '<ExcThread(monitor, started 140622044321536)>']
[2025-11-27 05:37:17] 2025-11-27 10:30:53,407 | INFO     | all workflow threads have been joined
[2025-11-27 05:37:17] 2025-11-27 10:30:53,407 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:37:17] 2025-11-27 10:30:53,407 | INFO     | traces error code: 0
[2025-11-27 05:37:17] 2025-11-27 10:30:53,408 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:37:17] 2025-11-27 10:31:08,371 | INFO     | PID=1425474 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 05:37:17] 2025-11-27 10:31:08,371 | INFO     | .. there are 67 such processes running
[2025-11-27 05:37:17] 2025-11-27 10:31:08,371 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:37:17] 2025-11-27 10:31:08,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:37:17] 2025-11-27 10:31:08,371 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:37:17] 2025-11-27 10:31:08,372 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:37:17] 2025-11-27 10:31:08,372 | INFO     | [monitor] control thread has ended
[2025-11-27 05:37:17] 2025-11-27 10:31:08,547 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:37:17] 2025-11-27 10:31:08,549 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:37:17] 2025-11-27 10:31:08,551 [wrapper] pilotpid: 1425474
[2025-11-27 05:37:17] 2025-11-27 10:31:08,554 [wrapper] Pilot exit status: 0
[2025-11-27 05:37:17] 2025-11-27 10:31:08,577 [wrapper] pandaids: 6897531607
[2025-11-27 05:37:17] 2025-11-27 10:31:08,733 [wrapper] cleanup supervisor_pilot 1417852 1425475
[2025-11-27 05:37:17] 2025-11-27 10:31:08,738 [wrapper] Test setup, not cleaning
[2025-11-27 05:37:17] 2025-11-27 10:31:08,741 [wrapper] apfmon messages muted
[2025-11-27 05:37:17] 2025-11-27 10:31:08,749 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:37:17] 2025-11-27 10:31:08,752 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:37:17]  *** Error codes and diagnostics ***
[2025-11-27 05:37:17]     "exeErrorCode": 0,
[2025-11-27 05:37:17]     "exeErrorDiag": "",
[2025-11-27 05:37:17]     "pilotErrorCode": 0,
[2025-11-27 05:37:17]     "pilotErrorDiag": "",
[2025-11-27 05:37:17]  *** Listing of results directory ***
[2025-11-27 05:37:17] total 1296964
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 05:37:17] -rwx------. 1 boincer umatlas     36292 Nov 25 12:01 runpilot2-wrapper.sh
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 12:02 queuedata.json
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas       100 Nov 26 19:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:37:17] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 19:01 run_atlas
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas       105 Nov 26 19:01 job.xml
[2025-11-27 05:37:17] -rw-r--r--. 2 boincer umatlas 408640863 Nov 26 19:01 EVNT.47483658._002306.pool.root.1
[2025-11-27 05:37:17] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 19:01 shared
[2025-11-27 05:37:17] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 19:01 input.tar.gz
[2025-11-27 05:37:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:01 start_atlas.sh
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas         0 Nov 26 19:01 boinc_lockfile
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 19:02 pandaJob.out
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas        57 Nov 26 19:02 setup.sh.local
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas    991538 Nov 26 19:02 agis_schedconf.cvmfs.json
[2025-11-27 05:37:17] drwx------. 5 boincer umatlas      4096 Nov 26 19:02 pilot3
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas       532 Nov 27 05:24 boinc_task_state.xml
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas 901912883 Nov 27 05:29 HITS.47556161._002892.pool.root.1
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas        95 Nov 27 05:30 pilot_heartbeat.json
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas      1075 Nov 27 05:30 memory_monitor_summary.json
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas   1516240 Nov 27 05:30 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas   1869681 Nov 27 05:30 log.47556161._002892.job.log.tgz.1
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas      8643 Nov 27 05:30 heartbeat.json
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas       823 Nov 27 05:31 pilotlog.txt
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas   4943452 Nov 27 05:31 log.47556161._002892.job.log.1
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas       353 Nov 27 05:31 output.list
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas       620 Nov 27 05:31 runtime_log
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas   6830080 Nov 27 05:31 result.tar.gz
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas       665 Nov 27 05:31 ziQMDmgaBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmoYMKDmlYYqnn.diag
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas      9338 Nov 27 05:31 runtime_log.err
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas      6947 Nov 27 05:37 init_data.xml
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 05:37 boinc_mmap_file
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas        28 Nov 27 05:37 wrapper_checkpoint.txt
[2025-11-27 05:37:17] -rw-r--r--. 1 boincer umatlas     21766 Nov 27 05:37 stderr.txt
[2025-11-27 05:37:17] HITS file was successfully produced:
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas 901912883 Nov 27 05:29 shared/HITS.pool.root.1
[2025-11-27 05:37:17]  *** Contents of shared directory: ***
[2025-11-27 05:37:17] total 1287112
[2025-11-27 05:37:17] -rw-r--r--. 2 boincer umatlas 408640863 Nov 26 19:01 ATLAS.root_0
[2025-11-27 05:37:17] -rw-r--r--. 2 boincer umatlas    590104 Nov 26 19:01 input.tar.gz
[2025-11-27 05:37:17] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 19:01 start_atlas.sh
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas 901912883 Nov 27 05:29 HITS.pool.root.1
[2025-11-27 05:37:17] -rw-------. 1 boincer umatlas   6830080 Nov 27 05:31 result.tar.gz
05:37:19 (1406179): run_atlas exited; CPU time 195906.531286
05:37:19 (1406179): called boinc_finish(0)

</stderr_txt>
]]>

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