Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
15:19:43 (2639015): wrapper (7.7.26015): starting
15:19:43 (2639015): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 15:19:43] Arguments: --nthreads 8
[2025-11-26 15:19:43] Threads: 8
[2025-11-26 15:19:43] Checking for CVMFS
[2025-11-26 15:19:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 15:19:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 15:19:43] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 15:19:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 15:19:43] 2.13.2.0 3460 3017 59912 153337 2 81 3191913 4096001 4044 130560 0 7164793 99.770 1344610 894 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 15:19:43] CVMFS is ok
[2025-11-26 15:19:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 15:19:43] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 15:19:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 15:19:43] Further information can be found at the LHC@home message board.
[2025-11-26 15:19:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 15:19:43] Checking for apptainer binary...
[2025-11-26 15:19:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 15:19:43] Running /usr/bin/apptainer --version
[2025-11-26 15:19:43] apptainer version 1.4.3
[2025-11-26 15:19:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 15:19:43] painter
[2025-11-26 15:19:43] apptainer works
[2025-11-26 15:19:43] Set ATHENA_PROC_NUMBER=8
[2025-11-26 15:19:43] Set ATHENA_CORE_NUMBER=8
[2025-11-26 15:19:43] Starting ATLAS job with PandaID=6897509005
[2025-11-26 15:19:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:34:44]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:34:44] 2025-11-27 02:34:12,491 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,067 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 19:34:44] 2025-11-27 02:34:13,070 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4452.980781249999
[2025-11-26 19:34:44] 2025-11-27 02:34:13,073 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6897509005/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,073 | INFO     | extracted standard info from prmon json
[2025-11-26 19:34:44] 2025-11-27 02:34:13,073 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 19:34:44] 2025-11-27 02:34:13,073 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 19:34:44] 2025-11-27 02:34:13,075 | INFO     | fitting pss+swap vs Time
[2025-11-26 19:34:44] 2025-11-27 02:34:13,075 | INFO     | sum of square deviations: 4844963104.099968
[2025-11-26 19:34:44] 2025-11-27 02:34:13,076 | INFO     | sum of deviations: 94246707148.18002
[2025-11-26 19:34:44] 2025-11-27 02:34:13,076 | INFO     | mean x: 1764203205.54
[2025-11-26 19:34:44] 2025-11-27 02:34:13,076 | INFO     | mean y: 2853730.732
[2025-11-26 19:34:44] 2025-11-27 02:34:13,076 | INFO     | intersect: -34315331834.33564
[2025-11-26 19:34:44] 2025-11-27 02:34:13,076 | INFO     | chi2: 3.323526790886147
[2025-11-26 19:34:44] 2025-11-27 02:34:13,076 | INFO     | sum of square deviations: 4560039881.591858
[2025-11-26 19:34:44] 2025-11-27 02:34:13,077 | INFO     | sum of deviations: 138529262647.34705
[2025-11-26 19:34:44] 2025-11-27 02:34:13,077 | INFO     | mean x: 1764203053.0408163
[2025-11-26 19:34:44] 2025-11-27 02:34:13,077 | INFO     | mean y: 2877250.6653061225
[2025-11-26 19:34:44] 2025-11-27 02:34:13,077 | INFO     | intersect: -53591774209.40651
[2025-11-26 19:34:44] 2025-11-27 02:34:13,077 | INFO     | chi2: 1.9742306695029892
[2025-11-26 19:34:44] 2025-11-27 02:34:13,077 | INFO     | current chi2=1.9742306695029892 (change=40.59832239304432 %)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,078 | INFO     | sum of square deviations: 4286512221.5833187
[2025-11-26 19:34:44] 2025-11-27 02:34:13,078 | INFO     | sum of deviations: 133373631539.7501
[2025-11-26 19:34:44] 2025-11-27 02:34:13,078 | INFO     | mean x: 1764202900.5416667
[2025-11-26 19:34:44] 2025-11-27 02:34:13,078 | INFO     | mean y: 2874376.025
[2025-11-26 19:34:44] 2025-11-27 02:34:13,078 | INFO     | intersect: -54889806539.11072
[2025-11-26 19:34:44] 2025-11-27 02:34:13,078 | INFO     | chi2: 1.974054533354004
[2025-11-26 19:34:44] 2025-11-27 02:34:13,079 | INFO     | current chi2=1.974054533354004 (change=0.008921761357779587 %)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,079 | INFO     | right removable region: 239
[2025-11-26 19:34:44] 2025-11-27 02:34:13,079 | INFO     | sum of square deviations: 4560033781.591858
[2025-11-26 19:34:44] 2025-11-27 02:34:13,079 | INFO     | sum of deviations: 37366395683.06125
[2025-11-26 19:34:44] 2025-11-27 02:34:13,080 | INFO     | mean x: 1764203358.0408163
[2025-11-26 19:34:44] 2025-11-27 02:34:13,080 | INFO     | mean y: 2883955.493877551
[2025-11-26 19:34:44] 2025-11-27 02:34:13,080 | INFO     | intersect: -14453570513.781107
[2025-11-26 19:34:44] 2025-11-27 02:34:13,080 | INFO     | chi2: 1.3959772869375087
[2025-11-26 19:34:44] 2025-11-27 02:34:13,080 | INFO     | current chi2=1.3959772869375087 (change=57.997110456109745 %)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,080 | INFO     | sum of square deviations: 4286500021.5833187
[2025-11-26 19:34:44] 2025-11-27 02:34:13,081 | INFO     | sum of deviations: 29747922970.999958
[2025-11-26 19:34:44] 2025-11-27 02:34:13,081 | INFO     | mean x: 1764203510.5416667
[2025-11-26 19:34:44] 2025-11-27 02:34:13,081 | INFO     | mean y: 2888202.8
[2025-11-26 19:34:44] 2025-11-27 02:34:13,081 | INFO     | intersect: -12240524808.399752
[2025-11-26 19:34:44] 2025-11-27 02:34:13,081 | INFO     | chi2: 1.3875299231005838
[2025-11-26 19:34:44] 2025-11-27 02:34:13,081 | INFO     | current chi2=1.3875299231005838 (change=0.6051218680969165 %)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,081 | INFO     | left removable region: 20
[2025-11-26 19:34:44] 2025-11-27 02:34:13,081 | INFO     | sum of square deviations: 3256877116.630151
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | sum of deviations: 56755944715.65752
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | mean x: 1764203480.041096
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | mean y: 2918866.593607306
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | intersect: -30740959884.344734
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | chi2: 0.008119547094288054
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | current memory leak: 17.43 B/s (using 219 data points, chi2=0.01)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | could have reported an average CPU frequency of 4646 MHz (12 samples)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | ..............................
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | . Timing measurements:
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | . get job = 0 s
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | . initial setup = 3 s
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | . payload setup = 3 s
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | . stage-in = 0 s
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | . payload execution = 15233 s
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | . stage-out = 2 s
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | . log creation = 0 s
[2025-11-26 19:34:44] 2025-11-27 02:34:13,082 | INFO     | ..............................
[2025-11-26 19:34:44] 2025-11-27 02:34:13,123 | INFO     | 
[2025-11-26 19:34:44] 2025-11-27 02:34:13,123 | INFO     | job summary report
[2025-11-26 19:34:44] 2025-11-27 02:34:13,123 | INFO     | --------------------------------------------------
[2025-11-26 19:34:44] 2025-11-27 02:34:13,123 | INFO     | PanDA job id: 6897509005
[2025-11-26 19:34:44] 2025-11-27 02:34:13,123 | INFO     | task id: 47556161
[2025-11-26 19:34:44] 2025-11-27 02:34:13,123 | INFO     | errors: (none)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,123 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:34:44] 2025-11-27 02:34:13,123 | INFO     | pilot state: finished 
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | transexitcode: 0
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | exeerrorcode: 0
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | exeerrordiag: 
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | exitcode: 0
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | exitmsg: OK
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | cpuconsumptiontime: 108483 s
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | nevents: 1000
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | neventsw: 0
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | pid: 2649529
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | pgrp: 2649529
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | corecount: 8
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | event service: False
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | sizes: {0: 2284101, 1: 2284300, 3: 2284562, 11: 2284590, 15241: 2316765, 15243: 2325773, 15244: 2325957, 15249: 2326203}
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | --------------------------------------------------
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | 
[2025-11-26 19:34:44] 2025-11-27 02:34:13,124 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,135 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,136 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,136 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,136 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,136 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,136 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,136 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,136 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:34:44] 2025-11-27 02:34:13,136 | INFO     | job 6897509005 has completed (purged errors)
[2025-11-26 19:34:44] 2025-11-27 02:34:13,136 | INFO     | overall cleanup function is called
[2025-11-26 19:34:44] 2025-11-27 02:34:14,147 | INFO     | --- collectZombieJob: --- 10, [2649529]
[2025-11-26 19:34:44] 2025-11-27 02:34:14,147 | INFO     | zombie collector waiting for pid 2649529
[2025-11-26 19:34:44] 2025-11-27 02:34:14,147 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:34:44] 2025-11-27 02:34:14,147 | INFO     | collected zombie processes
[2025-11-26 19:34:44] 2025-11-27 02:34:14,147 | INFO     | will attempt to kill all subprocesses of pid=2649529
[2025-11-26 19:34:44] 2025-11-27 02:34:14,229 | INFO     | process IDs to be killed: [2649529] (in reverse order)
[2025-11-26 19:34:44] 2025-11-27 02:34:14,266 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:34:44] 2025-11-27 02:34:14,266 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:34:44] 2025-11-27 02:34:14,269 | INFO     | did not find any defunct processes belonging to 2649529
[2025-11-26 19:34:44] 2025-11-27 02:34:14,271 | INFO     | did not find any defunct processes belonging to 2649529
[2025-11-26 19:34:44] 2025-11-27 02:34:14,271 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:34:44] 2025-11-27 02:34:14,271 | INFO     | ready for new job
[2025-11-26 19:34:44] 2025-11-27 02:34:14,271 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:34:44] 2025-11-27 02:34:14,273 | INFO     | ***************************************
[2025-11-26 19:34:44] 2025-11-27 02:34:14,273 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:34:44] 2025-11-27 02:34:14,273 | INFO     | ***************************************
[2025-11-26 19:34:44] 2025-11-27 02:34:14,273 | INFO     | 
[2025-11-26 19:34:44] 2025-11-27 02:34:14,274 | INFO     | architecture information:
[2025-11-26 19:34:44] 2025-11-27 02:34:14,274 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:34:44] 2025-11-27 02:34:14,282 | INFO     | cat /etc/os-release:
[2025-11-26 19:34:44] NAME="CentOS Linux"
[2025-11-26 19:34:44] VERSION="7 (Core)"
[2025-11-26 19:34:44] ID="centos"
[2025-11-26 19:34:44] ID_LIKE="rhel fedora"
[2025-11-26 19:34:44] VERSION_ID="7"
[2025-11-26 19:34:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:34:44] ANSI_COLOR="0;31"
[2025-11-26 19:34:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:34:44] HOME_URL="https://www.centos.org/"
[2025-11-26 19:34:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:34:44] 
[2025-11-26 19:34:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:34:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:34:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:34:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:34:44] 
[2025-11-26 19:34:44] 2025-11-27 02:34:14,282 | INFO     | ***************************************
[2025-11-26 19:34:44] 2025-11-27 02:34:14,785 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2025-11-26 19:34:44] 2025-11-27 02:34:14,794 | INFO     | sufficient remaining disk space (192067665920 B)
[2025-11-26 19:34:44] 2025-11-27 02:34:14,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:34:44] 2025-11-27 02:34:14,795 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:34:44] 2025-11-27 02:34:14,795 | INFO     | update_server=False
[2025-11-26 19:34:44] 2025-11-27 02:34:14,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:34:44] 2025-11-27 02:34:14,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:34:44] 2025-11-27 02:34:14,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:34:44] 2025-11-27 02:34:14,994 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 19:34:44] 2025-11-27 02:34:14,994 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 19:34:44] 2025-11-27 02:34:14,994 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:34:44] 2025-11-27 02:34:14,994 | INFO     | will abort loop
[2025-11-26 19:34:44] 2025-11-27 02:34:15,021 | INFO     | all payload control threads have been joined
[2025-11-26 19:34:44] 2025-11-27 02:34:15,552 | INFO     | all data control threads have been joined
[2025-11-26 19:34:44] 2025-11-27 02:34:15,798 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:15,800 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:15,846 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:15,853 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:15,893 | INFO     | all job control threads have been joined
[2025-11-26 19:34:44] 2025-11-27 02:34:15,940 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:15,953 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:34:44] 2025-11-27 02:34:16,000 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:16,026 | INFO     | [payload] control thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:16,407 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:16,557 | INFO     | [data] control thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:16,648 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:16,687 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:34:44] 2025-11-27 02:34:16,711 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:16,898 | INFO     | [job] control thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:17,031 | INFO     | [job] validate thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:17,138 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:17,959 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:18,799 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:34:44] 2025-11-27 02:34:19,800 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139264794752832)>', '<ExcThread(monitor, started 139264163567360)>']
[2025-11-26 19:34:44] 2025-11-27 02:34:24,816 | INFO     | all workflow threads have been joined
[2025-11-26 19:34:44] 2025-11-27 02:34:24,816 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:34:44] 2025-11-27 02:34:24,816 | INFO     | traces error code: 0
[2025-11-26 19:34:44] 2025-11-27 02:34:24,817 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:34:44] 2025-11-27 02:34:44,632 | INFO     | PID=2642868 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 19:34:44] 2025-11-27 02:34:44,633 | INFO     | .. there are 4 such processes running
[2025-11-26 19:34:44] 2025-11-27 02:34:44,633 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:34:44] 2025-11-27 02:34:44,633 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:34:44] 2025-11-27 02:34:44,633 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:34:44] 2025-11-27 02:34:44,633 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:34:44] 2025-11-27 02:34:44,633 | INFO     | [monitor] control thread has ended
[2025-11-26 19:34:44] 2025-11-27 02:34:44,685 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:34:44] 2025-11-27 02:34:44,687 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:34:44] 2025-11-27 02:34:44,688 [wrapper] pilotpid: 2642868
[2025-11-26 19:34:44] 2025-11-27 02:34:44,689 [wrapper] Pilot exit status: 0
[2025-11-26 19:34:44] 2025-11-27 02:34:44,699 [wrapper] pandaids: 6897509005
[2025-11-26 19:34:44] 2025-11-27 02:34:44,722 [wrapper] cleanup supervisor_pilot 2839394 2642869
[2025-11-26 19:34:44] 2025-11-27 02:34:44,723 [wrapper] Test setup, not cleaning
[2025-11-26 19:34:44] 2025-11-27 02:34:44,725 [wrapper] apfmon messages muted
[2025-11-26 19:34:44] 2025-11-27 02:34:44,726 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:34:44] 2025-11-27 02:34:44,728 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:34:44]  *** Error codes and diagnostics ***
[2025-11-26 19:34:44]     "exeErrorCode": 0,
[2025-11-26 19:34:44]     "exeErrorDiag": "",
[2025-11-26 19:34:44]     "pilotErrorCode": 0,
[2025-11-26 19:34:44]     "pilotErrorDiag": "",
[2025-11-26 19:34:44]  *** Listing of results directory ***
[2025-11-26 19:34:44] total 1305084
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc    576529 Nov 25 09:48 pilot3.tar.gz
[2025-11-26 19:34:44] -rwx------ 1 boinc boinc     36292 Nov 25 10:01 runpilot2-wrapper.sh
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc      5112 Nov 25 10:02 queuedata.json
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc       100 Nov 26 15:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:34:44] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 15:19 run_atlas
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc       105 Nov 26 15:19 job.xml
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc      9935 Nov 26 15:19 init_data.xml
[2025-11-26 19:34:44] -rw-r--r-- 2 boinc boinc 408037991 Nov 26 15:19 EVNT.47483658._002280.pool.root.1
[2025-11-26 19:34:44] -rw-r--r-- 2 boinc boinc     15847 Nov 26 15:19 start_atlas.sh
[2025-11-26 19:34:44] drwxrwx--x 2 boinc boinc      4096 Nov 26 15:19 shared
[2025-11-26 19:34:44] -rw-r--r-- 2 boinc boinc    590108 Nov 26 15:19 input.tar.gz
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc         0 Nov 26 15:19 boinc_lockfile
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc      2786 Nov 26 15:19 pandaJob.out
[2025-11-26 19:34:44] -rw------- 1 boinc boinc    991546 Nov 26 15:19 agis_schedconf.cvmfs.json
[2025-11-26 19:34:44] drwx------ 5 boinc boinc      4096 Nov 26 15:19 pilot3
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc       533 Nov 26 19:29 boinc_task_state.xml
[2025-11-26 19:34:44] -rw------- 1 boinc boinc 916875881 Nov 26 19:33 HITS.47556161._002637.pool.root.1
[2025-11-26 19:34:44] -rw------- 1 boinc boinc      1038 Nov 26 19:34 memory_monitor_summary.json
[2025-11-26 19:34:44] -rw------- 1 boinc boinc   1516240 Nov 26 19:34 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:34:44] -rw------- 1 boinc boinc   1557558 Nov 26 19:34 log.47556161._002637.job.log.tgz.1
[2025-11-26 19:34:44] -rw------- 1 boinc boinc      8550 Nov 26 19:34 heartbeat.json
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc      8192 Nov 26 19:34 boinc_mmap_file
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc        29 Nov 26 19:34 wrapper_checkpoint.txt
[2025-11-26 19:34:44] -rw------- 1 boinc boinc        95 Nov 26 19:34 pilot_heartbeat.json
[2025-11-26 19:34:44] -rw------- 1 boinc boinc       822 Nov 26 19:34 pilotlog.txt
[2025-11-26 19:34:44] -rw------- 1 boinc boinc   2227372 Nov 26 19:34 log.47556161._002637.job.log.1
[2025-11-26 19:34:44] -rw------- 1 boinc boinc       353 Nov 26 19:34 output.list
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc       620 Nov 26 19:34 runtime_log
[2025-11-26 19:34:44] -rw------- 1 boinc boinc   3809280 Nov 26 19:34 result.tar.gz
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc      8923 Nov 26 19:34 runtime_log.err
[2025-11-26 19:34:44] -rw------- 1 boinc boinc       662 Nov 26 19:34 gxUKDm6aBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmdZMKDmBEXJPo.diag
[2025-11-26 19:34:44] -rw-r--r-- 1 boinc boinc     21382 Nov 26 19:34 stderr.txt
[2025-11-26 19:34:44] HITS file was successfully produced:
[2025-11-26 19:34:44] -rw------- 1 boinc boinc 916875881 Nov 26 19:33 shared/HITS.pool.root.1
[2025-11-26 19:34:44]  *** Contents of shared directory: ***
[2025-11-26 19:34:44] total 1298188
[2025-11-26 19:34:44] -rw-r--r-- 2 boinc boinc 408037991 Nov 26 15:19 ATLAS.root_0
[2025-11-26 19:34:44] -rw-r--r-- 2 boinc boinc     15847 Nov 26 15:19 start_atlas.sh
[2025-11-26 19:34:44] -rw-r--r-- 2 boinc boinc    590108 Nov 26 15:19 input.tar.gz
[2025-11-26 19:34:44] -rw------- 1 boinc boinc 916875881 Nov 26 19:33 HITS.pool.root.1
[2025-11-26 19:34:44] -rw------- 1 boinc boinc   3809280 Nov 26 19:34 result.tar.gz
19:34:45 (2639015): run_atlas exited; CPU time 108339.099308
19:34:45 (2639015): called boinc_finish(0)

</stderr_txt>
]]>

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