Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:43:40 (598013): wrapper (7.7.26015): starting
18:43:40 (598013): wrapper: running run_atlas (--nthreads 3)
[2025-11-26 18:43:40] Arguments: --nthreads 3
[2025-11-26 18:43:40] Threads: 3
[2025-11-26 18:43:40] Checking for CVMFS
[2025-11-26 18:43:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 18:43:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 18:43:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 18:43:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 18:43:41] 2.9.2.0 368311 55 60164 153330 1 88 35728217 36864001 0 130560 0 688674 99.999 2741 8085 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-26 18:43:41] CVMFS is ok
[2025-11-26 18:43:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 18:43:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 18:43:41] Further information can be found at the LHC@home message board.
[2025-11-26 18:43:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 18:43:41] Checking for apptainer binary...
[2025-11-26 18:43:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 18:43:41] Running /usr/bin/apptainer --version
[2025-11-26 18:43:41] apptainer version 1.4.1-1.1
[2025-11-26 18:43:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 18:43:41] thA335
[2025-11-26 18:43:41] apptainer works
[2025-11-26 18:43:41] Set ATHENA_PROC_NUMBER=3
[2025-11-26 18:43:41] Set ATHENA_CORE_NUMBER=3
[2025-11-26 18:43:41] Starting ATLAS job with PandaID=6897509116
[2025-11-26 18:43:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:47:55]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:47:55] 2025-11-26 17:47:06,108 | INFO     | architecture information:
[2025-11-26 18:47:55] 2025-11-26 17:47:06,108 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:47:55] 2025-11-26 17:47:06,117 | INFO     | cat /etc/os-release:
[2025-11-26 18:47:55] NAME="CentOS Linux"
[2025-11-26 18:47:55] VERSION="7 (Core)"
[2025-11-26 18:47:55] ID="centos"
[2025-11-26 18:47:55] ID_LIKE="rhel fedora"
[2025-11-26 18:47:55] VERSION_ID="7"
[2025-11-26 18:47:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:47:55] ANSI_COLOR="0;31"
[2025-11-26 18:47:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:47:55] HOME_URL="https://www.centos.org/"
[2025-11-26 18:47:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:47:55] 
[2025-11-26 18:47:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:47:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:47:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:47:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:47:55] 
[2025-11-26 18:47:55] 2025-11-26 17:47:06,118 | INFO     | ***************************************
[2025-11-26 18:47:55] 2025-11-26 17:47:06,621 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-26 18:47:55] 2025-11-26 17:47:06,634 | INFO     | sufficient remaining disk space (825865797632 B)
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | INFO     | update_server=False
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:47:55] 2025-11-26 17:47:06,635 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:47:55] 2025-11-26 17:47:06,838 | INFO     | all job control threads have been joined
[2025-11-26 18:47:55] 2025-11-26 17:47:07,411 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:47:55] 2025-11-26 17:47:07,411 | INFO     | aborting loop
[2025-11-26 18:47:55] 2025-11-26 17:47:07,607 | INFO     | all payload control threads have been joined
[2025-11-26 18:47:55] 2025-11-26 17:47:07,627 | INFO     | all data control threads have been joined
[2025-11-26 18:47:55] 2025-11-26 17:47:07,640 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:07,641 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:07,845 | INFO     | [job] control thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,066 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,417 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,431 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,588 | INFO     | [job] validate thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,613 | INFO     | [payload] control thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,633 | INFO     | [data] control thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,640 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,678 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,739 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,794 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:08,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:09,094 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:10,642 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:47:55] 2025-11-26 17:47:48,962 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:47:55] 2025-11-26 17:47:50,446 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140405045565248)>', '<ExcThread(monitor, started 140404401882880)>']
[2025-11-26 18:47:55] 2025-11-26 17:47:50,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:47:55] 2025-11-26 17:47:50,869 | INFO     | [monitor] control thread has ended
[2025-11-26 18:47:55] 2025-11-26 17:47:55,463 | INFO     | all workflow threads have been joined
[2025-11-26 18:47:55] 2025-11-26 17:47:55,463 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:47:55] 2025-11-26 17:47:55,464 | INFO     | traces error code: 0
[2025-11-26 18:47:55] 2025-11-26 17:47:55,464 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:47:55] 2025-11-26 17:47:55,510 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:47:55] 2025-11-26 17:47:55,514 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:47:55] 2025-11-26 17:47:55,517 [wrapper] pilotpid: 601756
[2025-11-26 18:47:55] 2025-11-26 17:47:55,520 [wrapper] Pilot exit status: 0
[2025-11-26 18:47:55] 2025-11-26 17:47:55,527 [wrapper] pandaids: 6897509116
[2025-11-26 18:47:55] 2025-11-26 17:47:55,545 [wrapper] cleanup supervisor_pilot  601762 601757
[2025-11-26 18:47:55] 2025-11-26 17:47:55,548 [wrapper] Test setup, not cleaning
[2025-11-26 18:47:55] 2025-11-26 17:47:55,551 [wrapper] apfmon messages muted
[2025-11-26 18:47:55] 2025-11-26 17:47:55,553 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:47:55] 2025-11-26 17:47:55,556 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:47:55]  *** Error codes and diagnostics ***
[2025-11-26 18:47:55]     "exeErrorCode": 65,
[2025-11-26 18:47:55]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 18:47:55]     "pilotErrorCode": 1305,
[2025-11-26 18:47:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (8); Logfile error in log.EVNTtoHITS: \"problem in C++; program state has been reset\"",
[2025-11-26 18:47:55]  *** Listing of results directory ***
[2025-11-26 18:47:55] total 405788
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc    576529 Nov 25 17:48 pilot3.tar.gz
[2025-11-26 18:47:55] -rwx------ 1 boinc boinc     36292 Nov 25 18:01 runpilot2-wrapper.sh
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc      5112 Nov 25 18:02 queuedata.json
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc       100 Nov 26 18:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:47:55] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 18:43 run_atlas
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc       105 Nov 26 18:43 job.xml
[2025-11-26 18:47:55] -rw-r--r-- 2 boinc boinc 411333227 Nov 26 18:43 EVNT.47483658._002287.pool.root.1
[2025-11-26 18:47:55] -rw-r--r-- 2 boinc boinc    590109 Nov 26 18:43 input.tar.gz
[2025-11-26 18:47:55] -rw-r--r-- 2 boinc boinc     15847 Nov 26 18:43 start_atlas.sh
[2025-11-26 18:47:55] drwxrwx--x 2 boinc boinc      4096 Nov 26 18:43 shared
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc         0 Nov 26 18:43 boinc_setup_complete
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc      6196 Nov 26 18:43 init_data.xml
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc         0 Nov 26 18:43 boinc_lockfile
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc      2786 Nov 26 18:43 pandaJob.out
[2025-11-26 18:47:55] -rw------- 1 boinc boinc    991530 Nov 26 18:43 agis_schedconf.cvmfs.json
[2025-11-26 18:47:55] -rw------- 1 boinc boinc   1516240 Nov 26 18:43 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:47:55] drwx------ 5 boinc boinc      4096 Nov 26 18:43 pilot3
[2025-11-26 18:47:55] -rw------- 1 boinc boinc       956 Nov 26 18:44 memory_monitor_summary.json
[2025-11-26 18:47:55] -rw------- 1 boinc boinc     55781 Nov 26 18:45 log.47556161._002705.job.log.tgz.1
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc       523 Nov 26 18:45 boinc_task_state.xml
[2025-11-26 18:47:55] -rw------- 1 boinc boinc        95 Nov 26 18:46 pilot_heartbeat.json
[2025-11-26 18:47:55] -rw------- 1 boinc boinc      8397 Nov 26 18:47 heartbeat.json
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc      8192 Nov 26 18:47 boinc_mmap_file
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc        23 Nov 26 18:47 wrapper_checkpoint.txt
[2025-11-26 18:47:55] -rw------- 1 boinc boinc      4556 Nov 26 18:47 pilotlog.txt
[2025-11-26 18:47:55] -rw------- 1 boinc boinc     91399 Nov 26 18:47 log.47556161._002705.job.log.1
[2025-11-26 18:47:55] -rw------- 1 boinc boinc       186 Nov 26 18:47 output.list
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc       620 Nov 26 18:47 runtime_log
[2025-11-26 18:47:55] -rw------- 1 boinc boinc    163840 Nov 26 18:47 result.tar.gz
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc      8744 Nov 26 18:47 runtime_log.err
[2025-11-26 18:47:55] -rw------- 1 boinc boinc       648 Nov 26 18:47 owtLDm6aBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmcaMKDm1zsCam.diag
[2025-11-26 18:47:55] -rw-r--r-- 1 boinc boinc      9258 Nov 26 18:47 stderr.txt
[2025-11-26 18:47:55] No HITS result produced
[2025-11-26 18:47:55]  *** Contents of shared directory: ***
[2025-11-26 18:47:55] total 402456
[2025-11-26 18:47:55] -rw-r--r-- 2 boinc boinc 411333227 Nov 26 18:43 ATLAS.root_0
[2025-11-26 18:47:55] -rw-r--r-- 2 boinc boinc    590109 Nov 26 18:43 input.tar.gz
[2025-11-26 18:47:55] -rw-r--r-- 2 boinc boinc     15847 Nov 26 18:43 start_atlas.sh
[2025-11-26 18:47:55] -rw------- 1 boinc boinc    163840 Nov 26 18:47 result.tar.gz
18:47:56 (598013): run_atlas exited; CPU time 30.113352
18:47:56 (598013): called boinc_finish(0)

</stderr_txt>
]]>

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