Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:42:27 (12872): wrapper (7.7.26015): starting
12:42:27 (12872): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 12:42:27] Arguments: --nthreads 8
[2025-11-26 12:42:27] Threads: 8
[2025-11-26 12:42:27] Checking for CVMFS
[2025-11-26 12:42:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 12:42:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 12:42:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 12:42:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 12:42:27] 2.11.2.0 2989 73616 84236 153330 3 82 17853760 20275200 1 130560 0 21070974 99.889 3793767 29481 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 12:42:27] CVMFS is ok
[2025-11-26 12:42:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 12:42:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 12:42:27] Further information can be found at the LHC@home message board.
[2025-11-26 12:42:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 12:42:27] Checking for apptainer binary...
[2025-11-26 12:42:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 12:42:27] Running /usr/bin/apptainer --version
[2025-11-26 12:42:27] apptainer version 1.3.2-1.el7
[2025-11-26 12:42:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 12:42:29] c-204-24.aglt2.org
[2025-11-26 12:42:29] apptainer works
[2025-11-26 12:42:29] Set ATHENA_PROC_NUMBER=8
[2025-11-26 12:42:29] Set ATHENA_CORE_NUMBER=8
[2025-11-26 12:42:29] Starting ATLAS job with PandaID=6897487245
[2025-11-26 12:42:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 01:17:09]  *** The last 200 lines of the pilot log: ***
[2025-11-27 01:17:09] 2025-11-27 06:16:05,931 | INFO     | monitor loop #3328: job 0:6897487245 is in state 'finished'
[2025-11-27 01:17:09] 2025-11-27 06:16:05,931 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 01:17:09] 2025-11-27 06:16:06,785 | INFO     | time since job start (45199s) is within the limit (172800.0s)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,243 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-27 01:17:09] 2025-11-27 06:16:07,246 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1812.25
[2025-11-27 01:17:09] 2025-11-27 06:16:07,248 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897487245/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,249 | INFO     | extracted standard info from prmon json
[2025-11-27 01:17:09] 2025-11-27 06:16:07,249 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 01:17:09] 2025-11-27 06:16:07,249 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 01:17:09] 2025-11-27 06:16:07,262 | INFO     | fitting pss+swap vs Time
[2025-11-27 01:17:09] 2025-11-27 06:16:07,263 | INFO     | sum of square deviations: 126163336802.33179
[2025-11-27 01:17:09] 2025-11-27 06:16:07,274 | INFO     | sum of deviations: 796817656880.5411
[2025-11-27 01:17:09] 2025-11-27 06:16:07,275 | INFO     | mean x: 1764201570.562753
[2025-11-27 01:17:09] 2025-11-27 06:16:07,275 | INFO     | mean y: 2865637.439946019
[2025-11-27 01:17:09] 2025-11-27 06:16:07,275 | INFO     | intersect: -11139412280.615263
[2025-11-27 01:17:09] 2025-11-27 06:16:07,276 | INFO     | chi2: 6.256804436062877
[2025-11-27 01:17:09] 2025-11-27 06:16:07,277 | INFO     | sum of square deviations: 123626746655.73683
[2025-11-27 01:17:09] 2025-11-27 06:16:07,288 | INFO     | sum of deviations: 1064008861038.6006
[2025-11-27 01:17:09] 2025-11-27 06:16:07,289 | INFO     | mean x: 1764201418.066576
[2025-11-27 01:17:09] 2025-11-27 06:16:07,289 | INFO     | mean y: 2881703.008152174
[2025-11-27 01:17:09] 2025-11-27 06:16:07,289 | INFO     | intersect: -15180935652.526815
[2025-11-27 01:17:09] 2025-11-27 06:16:07,290 | INFO     | chi2: 2.6538878428461996
[2025-11-27 01:17:09] 2025-11-27 06:16:07,290 | INFO     | current chi2=2.6538878428461996 (change=57.583973257182855 %)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,291 | INFO     | sum of square deviations: 121124389709.12177
[2025-11-27 01:17:09] 2025-11-27 06:16:07,302 | INFO     | sum of deviations: 1121308971792.528
[2025-11-27 01:17:09] 2025-11-27 06:16:07,302 | INFO     | mean x: 1764201265.5704515
[2025-11-27 01:17:09] 2025-11-27 06:16:07,302 | INFO     | mean y: 2885188.9411764704
[2025-11-27 01:17:09] 2025-11-27 06:16:07,303 | INFO     | intersect: -16329207066.65268
[2025-11-27 01:17:09] 2025-11-27 06:16:07,303 | INFO     | chi2: 2.3631949093771705
[2025-11-27 01:17:09] 2025-11-27 06:16:07,304 | INFO     | current chi2=2.3631949093771705 (change=10.953474701375148 %)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,304 | INFO     | right removable region: 730
[2025-11-27 01:17:09] 2025-11-27 06:16:07,304 | INFO     | sum of square deviations: 123626492285.73674
[2025-11-27 01:17:09] 2025-11-27 06:16:07,316 | INFO     | sum of deviations: 596071412148.5426
[2025-11-27 01:17:09] 2025-11-27 06:16:07,316 | INFO     | mean x: 1764201723.066576
[2025-11-27 01:17:09] 2025-11-27 06:16:07,316 | INFO     | mean y: 2877686.152173913
[2025-11-27 01:17:09] 2025-11-27 06:16:07,316 | INFO     | intersect: -8503310534.028461
[2025-11-27 01:17:09] 2025-11-27 06:16:07,317 | INFO     | chi2: 4.076208603431228
[2025-11-27 01:17:09] 2025-11-27 06:16:07,317 | INFO     | current chi2=4.076208603431228 (change=34.85159005551082 %)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,318 | INFO     | sum of square deviations: 121123880969.12175
[2025-11-27 01:17:09] 2025-11-27 06:16:07,329 | INFO     | sum of deviations: 551748170278.6233
[2025-11-27 01:17:09] 2025-11-27 06:16:07,329 | INFO     | mean x: 1764201875.5704515
[2025-11-27 01:17:09] 2025-11-27 06:16:07,330 | INFO     | mean y: 2880385.871409029
[2025-11-27 01:17:09] 2025-11-27 06:16:07,330 | INFO     | intersect: -8033479983.858328
[2025-11-27 01:17:09] 2025-11-27 06:16:07,331 | INFO     | chi2: 4.0304674625778345
[2025-11-27 01:17:09] 2025-11-27 06:16:07,331 | INFO     | current chi2=4.0304674625778345 (change=1.122149166136638 %)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,331 | INFO     | left removable region: 20
[2025-11-27 01:17:09] 2025-11-27 06:16:07,332 | INFO     | sum of square deviations: 110982226441.5833
[2025-11-27 01:17:09] 2025-11-27 06:16:07,342 | INFO     | sum of deviations: 818720105809.3125
[2025-11-27 01:17:09] 2025-11-27 06:16:07,343 | INFO     | mean x: 1764201845.0788732
[2025-11-27 01:17:09] 2025-11-27 06:16:07,343 | INFO     | mean y: 2903682.9408450704
[2025-11-27 01:17:09] 2025-11-27 06:16:07,343 | INFO     | intersect: -13011680431.860891
[2025-11-27 01:17:09] 2025-11-27 06:16:07,344 | INFO     | chi2: 0.09798189394869304
[2025-11-27 01:17:09] 2025-11-27 06:16:07,344 | INFO     | current memory leak: 7.38 B/s (using 710 data points, chi2=0.10)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,345 | INFO     | could have reported an average CPU frequency of 2165 MHz (28 samples)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,345 | INFO     | ..............................
[2025-11-27 01:17:09] 2025-11-27 06:16:07,345 | INFO     | . Timing measurements:
[2025-11-27 01:17:09] 2025-11-27 06:16:07,345 | INFO     | . get job = 0 s
[2025-11-27 01:17:09] 2025-11-27 06:16:07,345 | INFO     | . initial setup = 2 s
[2025-11-27 01:17:09] 2025-11-27 06:16:07,345 | INFO     | . payload setup = 9 s
[2025-11-27 01:17:09] 2025-11-27 06:16:07,345 | INFO     | . stage-in = 0 s
[2025-11-27 01:17:09] 2025-11-27 06:16:07,346 | INFO     | . payload execution = 45157 s
[2025-11-27 01:17:09] 2025-11-27 06:16:07,346 | INFO     | . stage-out = 3 s
[2025-11-27 01:17:09] 2025-11-27 06:16:07,346 | INFO     | . log creation = 0 s
[2025-11-27 01:17:09] 2025-11-27 06:16:07,346 | INFO     | ..............................
[2025-11-27 01:17:09] 2025-11-27 06:16:07,446 | INFO     | 
[2025-11-27 01:17:09] 2025-11-27 06:16:07,446 | INFO     | job summary report
[2025-11-27 01:17:09] 2025-11-27 06:16:07,446 | INFO     | --------------------------------------------------
[2025-11-27 01:17:09] 2025-11-27 06:16:07,446 | INFO     | PanDA job id: 6897487245
[2025-11-27 01:17:09] 2025-11-27 06:16:07,446 | INFO     | task id: 47556161
[2025-11-27 01:17:09] 2025-11-27 06:16:07,447 | INFO     | errors: (none)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 01:17:09] 2025-11-27 06:16:07,447 | INFO     | pilot state: finished 
[2025-11-27 01:17:09] 2025-11-27 06:16:07,447 | INFO     | transexitcode: 0
[2025-11-27 01:17:09] 2025-11-27 06:16:07,447 | INFO     | exeerrorcode: 0
[2025-11-27 01:17:09] 2025-11-27 06:16:07,448 | INFO     | exeerrordiag: 
[2025-11-27 01:17:09] 2025-11-27 06:16:07,448 | INFO     | exitcode: 0
[2025-11-27 01:17:09] 2025-11-27 06:16:07,448 | INFO     | exitmsg: OK
[2025-11-27 01:17:09] 2025-11-27 06:16:07,448 | INFO     | cpuconsumptiontime: 350040 s
[2025-11-27 01:17:09] 2025-11-27 06:16:07,448 | INFO     | nevents: 1000
[2025-11-27 01:17:09] 2025-11-27 06:16:07,448 | INFO     | neventsw: 0
[2025-11-27 01:17:09] 2025-11-27 06:16:07,449 | INFO     | pid: 23127
[2025-11-27 01:17:09] 2025-11-27 06:16:07,449 | INFO     | pgrp: 23127
[2025-11-27 01:17:09] 2025-11-27 06:16:07,449 | INFO     | corecount: 8
[2025-11-27 01:17:09] 2025-11-27 06:16:07,449 | INFO     | event service: False
[2025-11-27 01:17:09] 2025-11-27 06:16:07,449 | INFO     | sizes: {0: 2284094, 1: 2284293, 7: 2284555, 11: 2284583, 45171: 2330593, 45175: 2339771, 45183: 2339961}
[2025-11-27 01:17:09] 2025-11-27 06:16:07,449 | INFO     | --------------------------------------------------
[2025-11-27 01:17:09] 2025-11-27 06:16:07,450 | INFO     | 
[2025-11-27 01:17:09] 2025-11-27 06:16:07,450 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 01:17:09] 2025-11-27 06:16:07,480 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,481 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,481 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,481 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,481 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,482 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,482 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,482 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,482 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,482 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,482 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,483 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,483 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,483 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,483 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,483 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,484 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,484 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,484 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,484 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 01:17:09] 2025-11-27 06:16:07,484 | INFO     | job 6897487245 has completed (purged errors)
[2025-11-27 01:17:09] 2025-11-27 06:16:07,485 | INFO     | overall cleanup function is called
[2025-11-27 01:17:09] 2025-11-27 06:16:08,500 | INFO     | --- collectZombieJob: --- 10, [23127]
[2025-11-27 01:17:09] 2025-11-27 06:16:08,501 | INFO     | zombie collector waiting for pid 23127
[2025-11-27 01:17:09] 2025-11-27 06:16:08,501 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 01:17:09] 2025-11-27 06:16:08,501 | INFO     | collected zombie processes
[2025-11-27 01:17:09] 2025-11-27 06:16:08,501 | INFO     | will attempt to kill all subprocesses of pid=23127
[2025-11-27 01:17:09] 2025-11-27 06:16:08,599 | INFO     | process IDs to be killed: [23127] (in reverse order)
[2025-11-27 01:17:09] 2025-11-27 06:16:08,655 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 01:17:09] 2025-11-27 06:16:08,656 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 01:17:09] 2025-11-27 06:16:08,661 | INFO     | did not find any defunct processes belonging to 23127
[2025-11-27 01:17:09] 2025-11-27 06:16:08,663 | INFO     | did not find any defunct processes belonging to 23127
[2025-11-27 01:17:09] 2025-11-27 06:16:08,666 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 01:17:09] 2025-11-27 06:16:08,666 | INFO     | ready for new job
[2025-11-27 01:17:09] 2025-11-27 06:16:08,666 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 01:17:09] 2025-11-27 06:16:08,670 | INFO     | ***************************************
[2025-11-27 01:17:09] 2025-11-27 06:16:08,670 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 01:17:09] 2025-11-27 06:16:08,670 | INFO     | ***************************************
[2025-11-27 01:17:09] 2025-11-27 06:16:08,670 | INFO     | 
[2025-11-27 01:17:09] 2025-11-27 06:16:08,671 | INFO     | architecture information:
[2025-11-27 01:17:09] 2025-11-27 06:16:08,672 | INFO     | executing command: cat /etc/os-release
[2025-11-27 01:17:09] 2025-11-27 06:16:08,691 | INFO     | cat /etc/os-release:
[2025-11-27 01:17:09] NAME="CentOS Linux"
[2025-11-27 01:17:09] VERSION="7 (Core)"
[2025-11-27 01:17:09] ID="centos"
[2025-11-27 01:17:09] ID_LIKE="rhel fedora"
[2025-11-27 01:17:09] VERSION_ID="7"
[2025-11-27 01:17:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 01:17:09] ANSI_COLOR="0;31"
[2025-11-27 01:17:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 01:17:09] HOME_URL="https://www.centos.org/"
[2025-11-27 01:17:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 01:17:09] 
[2025-11-27 01:17:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 01:17:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 01:17:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 01:17:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 01:17:09] 
[2025-11-27 01:17:09] 2025-11-27 06:16:08,691 | INFO     | ***************************************
[2025-11-27 01:17:09] 2025-11-27 06:16:09,194 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 01:17:09] 2025-11-27 06:16:09,216 | INFO     | sufficient remaining disk space (17601396736 B)
[2025-11-27 01:17:09] 2025-11-27 06:16:09,217 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 01:17:09] 2025-11-27 06:16:09,217 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 01:17:09] 2025-11-27 06:16:09,217 | INFO     | update_server=False
[2025-11-27 01:17:09] 2025-11-27 06:16:09,218 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 01:17:09] 2025-11-27 06:16:09,218 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:17:09] 2025-11-27 06:16:09,427 | INFO     | all payload control threads have been joined
[2025-11-27 01:17:09] 2025-11-27 06:16:09,439 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 01:17:09] 2025-11-27 06:16:09,439 | INFO     | aborting loop
[2025-11-27 01:17:09] 2025-11-27 06:16:09,497 | INFO     | all job control threads have been joined
[2025-11-27 01:17:09] 2025-11-27 06:16:09,821 | INFO     | all data control threads have been joined
[2025-11-27 01:17:09] 2025-11-27 06:16:10,080 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 01:17:09] 2025-11-27 06:16:10,160 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 01:17:09] 2025-11-27 06:16:10,223 | INFO     | [job] retrieve thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:10,224 | INFO     | [job] queue monitor thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:10,302 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:10,433 | INFO     | [payload] control thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:10,445 | INFO     | [job] job monitor thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:10,503 | INFO     | [job] control thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:10,826 | INFO     | [data] control thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:10,992 | INFO     | [payload] failed_post thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:11,033 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:11,162 | INFO     | [payload] validate_post thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:11,582 | INFO     | [data] copytool_in thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:11,585 | INFO     | [job] validate thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:11,647 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:12,085 | INFO     | [data] copytool_out thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:14,166 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:19,573 | INFO     | job.realtimelogging is not enabled
[2025-11-27 01:17:09] 2025-11-27 06:16:20,579 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 01:17:09] 2025-11-27 06:16:39,993 | INFO     | PID=16587 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 01:17:09] 2025-11-27 06:16:39,993 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 01:17:09] 2025-11-27 06:16:39,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 01:17:09] 2025-11-27 06:16:39,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 01:17:09] 2025-11-27 06:17:02,342 | INFO     | [monitor] cgroup control has ended
[2025-11-27 01:17:09] 2025-11-27 06:17:03,685 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139653021153088)>', '<ExcThread(monitor, started 139652002477824)>']
[2025-11-27 01:17:09] 2025-11-27 06:17:04,091 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 01:17:09] 2025-11-27 06:17:04,091 | INFO     | [monitor] control thread has ended
[2025-11-27 01:17:09] 2025-11-27 06:17:08,710 | INFO     | all workflow threads have been joined
[2025-11-27 01:17:09] 2025-11-27 06:17:08,711 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 01:17:09] 2025-11-27 06:17:08,711 | INFO     | traces error code: 0
[2025-11-27 01:17:09] 2025-11-27 06:17:08,711 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 01:17:09] 2025-11-27 06:17:08,822 [wrapper] ==== pilot stdout END ====
[2025-11-27 01:17:09] 2025-11-27 06:17:08,829 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 01:17:09] 2025-11-27 06:17:08,834 [wrapper] pilotpid: 16587
[2025-11-27 01:17:09] 2025-11-27 06:17:08,838 [wrapper] Pilot exit status: 0
[2025-11-27 01:17:09] 2025-11-27 06:17:08,855 [wrapper] pandaids: 6897487245
[2025-11-27 01:17:09] 2025-11-27 06:17:08,910 [wrapper] cleanup supervisor_pilot 13125 16588
[2025-11-27 01:17:09] 2025-11-27 06:17:08,915 [wrapper] Test setup, not cleaning
[2025-11-27 01:17:09] 2025-11-27 06:17:08,921 [wrapper] apfmon messages muted
[2025-11-27 01:17:09] 2025-11-27 06:17:08,926 [wrapper] ==== wrapper stdout END ====
[2025-11-27 01:17:09] 2025-11-27 06:17:08,931 [wrapper] ==== wrapper stderr END ====
[2025-11-27 01:17:09]  *** Error codes and diagnostics ***
[2025-11-27 01:17:09]     "exeErrorCode": 0,
[2025-11-27 01:17:09]     "exeErrorDiag": "",
[2025-11-27 01:17:09]     "pilotErrorCode": 0,
[2025-11-27 01:17:09]     "pilotErrorDiag": "",
[2025-11-27 01:17:09]  *** Listing of results directory ***
[2025-11-27 01:17:09] total 1308748
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 01:17:09] -rwx------ 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas       100 Nov 26 12:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 01:17:09] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 12:42 run_atlas
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas       105 Nov 26 12:42 job.xml
[2025-11-27 01:17:09] -rw-r--r-- 2 boincer umatlas 410564153 Nov 26 12:42 EVNT.47483658._002246.pool.root.1
[2025-11-27 01:17:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 12:42 start_atlas.sh
[2025-11-27 01:17:09] drwxrwx--x 2 boincer umatlas      4096 Nov 26 12:42 shared
[2025-11-27 01:17:09] -rw-r--r-- 2 boincer umatlas    590104 Nov 26 12:42 input.tar.gz
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas         0 Nov 26 12:42 boinc_lockfile
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas      2786 Nov 26 12:42 pandaJob.out
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas        57 Nov 26 12:42 setup.sh.local
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas    991530 Nov 26 12:42 agis_schedconf.cvmfs.json
[2025-11-27 01:17:09] drwx------ 5 boincer umatlas      4096 Nov 26 12:42 pilot3
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas       533 Nov 27 01:06 boinc_task_state.xml
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas      5913 Nov 27 01:11 init_data.xml
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas 909239691 Nov 27 01:15 HITS.47556161._002300.pool.root.1
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas        95 Nov 27 01:15 pilot_heartbeat.json
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas      1062 Nov 27 01:15 memory_monitor_summary.json
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas   1516240 Nov 27 01:15 agis_ddmendpoints.agis.ALL.json
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas   1991541 Nov 27 01:15 log.47556161._002300.job.log.tgz.1
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas      8660 Nov 27 01:16 heartbeat.json
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas      8192 Nov 27 01:16 boinc_mmap_file
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas        29 Nov 27 01:16 wrapper_checkpoint.txt
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas      4818 Nov 27 01:17 pilotlog.txt
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas   6225943 Nov 27 01:17 log.47556161._002300.job.log.1
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas       353 Nov 27 01:17 output.list
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas       620 Nov 27 01:17 runtime_log
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas   8232960 Nov 27 01:17 result.tar.gz
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas      9343 Nov 27 01:17 runtime_log.err
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas       668 Nov 27 01:17 eCTLDmGXBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmLbJKDmPVq26m.diag
[2025-11-27 01:17:09] -rw-r--r-- 1 boincer umatlas     21272 Nov 27 01:17 stderr.txt
[2025-11-27 01:17:09] HITS file was successfully produced:
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas 909239691 Nov 27 01:15 shared/HITS.pool.root.1
[2025-11-27 01:17:09]  *** Contents of shared directory: ***
[2025-11-27 01:17:09] total 1297516
[2025-11-27 01:17:09] -rw-r--r-- 2 boincer umatlas 410564153 Nov 26 12:42 ATLAS.root_0
[2025-11-27 01:17:09] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 12:42 start_atlas.sh
[2025-11-27 01:17:09] -rw-r--r-- 2 boincer umatlas    590104 Nov 26 12:42 input.tar.gz
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas 909239691 Nov 27 01:15 HITS.pool.root.1
[2025-11-27 01:17:09] -rw------- 1 boincer umatlas   8232960 Nov 27 01:17 result.tar.gz
01:17:10 (12872): run_atlas exited; CPU time 346134.235645
01:17:10 (12872): called boinc_finish(0)

</stderr_txt>
]]>

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