Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:35:55 (784656): wrapper (7.7.26015): starting
09:35:55 (784656): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 09:35:55] Arguments: --nthreads 12
[2025-11-26 09:35:55] Threads: 12
[2025-11-26 09:35:55] Checking for CVMFS
[2025-11-26 09:35:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 09:35:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 09:35:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 09:35:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 09:35:56] 2.11.5.0 3877898 28594 212696 153330 3 205 32189186 45568001 30551 130560 0 263473820 99.798 163709854 26578 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-26 09:35:56] CVMFS is ok
[2025-11-26 09:35:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 09:35:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 09:35:56] Further information can be found at the LHC@home message board.
[2025-11-26 09:35:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 09:35:56] Checking for apptainer binary...
[2025-11-26 09:35:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 09:35:56] Running /usr/bin/apptainer --version
[2025-11-26 09:35:56] apptainer version 1.4.1-1.el9
[2025-11-26 09:35:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 09:35:56] wns0033.triumf.lcg
[2025-11-26 09:35:56] apptainer works
[2025-11-26 09:35:57] Set ATHENA_PROC_NUMBER=12
[2025-11-26 09:35:57] Set ATHENA_CORE_NUMBER=12
[2025-11-26 09:35:57] Starting ATLAS job with PandaID=6897531543
[2025-11-26 09:35:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 09:40:18]  *** The last 200 lines of the pilot log: ***
[2025-11-26 09:40:18] 2025-11-26 17:39:43,931 | WARNING  | wrong length of table data, x=[1764178603.0], y=[1614.0] (must be same and length>=4)
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | could have reported an average CPU frequency of 2736 MHz (4 samples)
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | ..............................
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . Timing measurements:
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . get job = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . initial setup = 2 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . payload setup = 7 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . stage-in = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . payload execution = 59 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . stage-out = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . log creation = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | ..............................
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 09:40:18] 2025-11-26 17:39:43,933 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897531543/pilotlog.txt
[2025-11-26 09:40:18] 2025-11-26 17:39:43,943 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-26 09:40:18] - Log from pilotlog.txt -
[2025-11-26 09:40:18] 2025-11-26 17:39:43,929 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897531543/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:40:18] 2025-11-26 17:39:43,930 | INFO     | extracted standard info from prmon json
[2025-11-26 09:40:18] 2025-11-26 17:39:43,930 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:40:18] 2025-11-26 17:39:43,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:40:18] 2025-11-26 17:39:43,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 09:40:18] 2025-11-26 17:39:43,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 09:40:18] 2025-11-26 17:39:43,931 | WARNING  | wrong length of table data, x=[1764178603.0], y=[1614.0] (must be same and length>=4)
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | could have reported an average CPU frequency of 2736 MHz (4 samples)
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | ..............................
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . Timing measurements:
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . get job = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . initial setup = 2 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . payload setup = 7 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . stage-in = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . payload execution = 59 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . stage-out = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . log creation = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | ..............................
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 09:40:18] 2025-11-26 17:39:43,933 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897531543/pilotlog.txt
[2025-11-26 09:40:18] 2025-11-26 17:39:43,943 | WARNING  | 
[2025-11-26 09:40:18] [begin log extracts]
[2025-11-26 09:40:18] - Log from pilotlog.txt -
[2025-11-26 09:40:18] 2025-11-26 17:39:43,929 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897531543/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 09:40:18] 2025-11-26 17:39:43,930 | INFO     | extracted standard info from prmon json
[2025-11-26 09:40:18] 2025-11-26 17:39:43,930 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 09:40:18] 2025-11-26 17:39:43,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 09:40:18] 2025-11-26 17:39:43,930 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-26 09:40:18] 2025-11-26 17:39:43,931 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-26 09:40:18] 2025-11-26 17:39:43,931 | WARNING  | wrong length of table data, x=[1764178603.0], y=[1614.0] (must be same and length>=4)
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | could have reported an average CPU frequency of 2736 MHz (4 samples)
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | ..............................
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . Timing measurements:
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . get job = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . initial setup = 2 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . payload setup = 7 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . stage-in = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . payload execution = 59 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . stage-out = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | . log creation = 0 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | ..............................
[2025-11-26 09:40:18] 2025-11-26 17:39:43,932 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-26 09:40:18] 2025-11-26 17:39:43,933 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897531543/pilotlog.txt
[2025-11-26 09:40:18] [end log extracts]
[2025-11-26 09:40:18] 2025-11-26 17:39:43,944 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-26 09:40:18] 2025-11-26 17:39:43,944 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-26 09:40:18] 2025-11-26 17:39:43,998 | INFO     | 
[2025-11-26 09:40:18] 2025-11-26 17:39:43,998 | INFO     | job summary report
[2025-11-26 09:40:18] 2025-11-26 17:39:43,998 | INFO     | --------------------------------------------------
[2025-11-26 09:40:18] 2025-11-26 17:39:43,998 | INFO     | PanDA job id: 6897531543
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | task id: 47556173
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-26 09:37:31,574 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | pilot state: failed 
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | transexitcode: 65
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | exeerrorcode: 65
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | exitcode: 65
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | cpuconsumptiontime: 41 s
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | nevents: 0
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | neventsw: 0
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | pid: 795059
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | pgrp: 795059
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | corecount: 12
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | event service: False
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | sizes: {0: 2284260, 7: 2284522, 11: 2284550, 70: 2309945, 72: 2314235, 75: 2314263, 195: 2314557}
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | --------------------------------------------------
[2025-11-26 09:40:18] 2025-11-26 17:39:43,999 | INFO     | 
[2025-11-26 09:40:18] 2025-11-26 17:39:44,000 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-26 09:40:18] 2025-11-26 17:39:44,015 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,017 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,017 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,017 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 09:40:18] 2025-11-26 17:39:44,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 09:40:18] 2025-11-26 17:39:44,017 | INFO     | job 6897531543 has completed (purged errors)
[2025-11-26 09:40:18] 2025-11-26 17:39:44,017 | INFO     | overall cleanup function is called
[2025-11-26 09:40:18] 2025-11-26 17:39:45,031 | INFO     | --- collectZombieJob: --- 10, [795059]
[2025-11-26 09:40:18] 2025-11-26 17:39:45,031 | INFO     | zombie collector waiting for pid 795059
[2025-11-26 09:40:18] 2025-11-26 17:39:45,031 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 09:40:18] 2025-11-26 17:39:45,031 | INFO     | collected zombie processes
[2025-11-26 09:40:18] 2025-11-26 17:39:45,031 | INFO     | will attempt to kill all subprocesses of pid=795059
[2025-11-26 09:40:18] 2025-11-26 17:39:45,232 | INFO     | process IDs to be killed: [795059] (in reverse order)
[2025-11-26 09:40:18] 2025-11-26 17:39:45,308 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 09:40:18] 2025-11-26 17:39:45,308 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 09:40:18] 2025-11-26 17:39:45,317 | INFO     | did not find any defunct processes belonging to 795059
[2025-11-26 09:40:18] 2025-11-26 17:39:45,325 | INFO     | did not find any defunct processes belonging to 795059
[2025-11-26 09:40:18] 2025-11-26 17:39:45,325 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 09:40:18] 2025-11-26 17:39:45,326 | INFO     | ready for new job
[2025-11-26 09:40:18] 2025-11-26 17:39:45,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 09:40:18] 2025-11-26 17:39:45,327 | INFO     | ***************************************
[2025-11-26 09:40:18] 2025-11-26 17:39:45,327 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 09:40:18] 2025-11-26 17:39:45,327 | INFO     | ***************************************
[2025-11-26 09:40:18] 2025-11-26 17:39:45,327 | INFO     | 
[2025-11-26 09:40:18] 2025-11-26 17:39:45,329 | INFO     | architecture information:
[2025-11-26 09:40:18] 2025-11-26 17:39:45,330 | INFO     | executing command: cat /etc/os-release
[2025-11-26 09:40:18] 2025-11-26 17:39:45,345 | INFO     | cat /etc/os-release:
[2025-11-26 09:40:18] NAME="CentOS Linux"
[2025-11-26 09:40:18] VERSION="7 (Core)"
[2025-11-26 09:40:18] ID="centos"
[2025-11-26 09:40:18] ID_LIKE="rhel fedora"
[2025-11-26 09:40:18] VERSION_ID="7"
[2025-11-26 09:40:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 09:40:18] ANSI_COLOR="0;31"
[2025-11-26 09:40:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 09:40:18] HOME_URL="https://www.centos.org/"
[2025-11-26 09:40:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 09:40:18] 
[2025-11-26 09:40:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 09:40:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 09:40:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 09:40:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 09:40:18] 
[2025-11-26 09:40:18] 2025-11-26 17:39:45,345 | INFO     | ***************************************
[2025-11-26 09:40:18] 2025-11-26 17:39:45,848 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-26 09:40:18] 2025-11-26 17:39:45,859 | INFO     | sufficient remaining disk space (1631158534144 B)
[2025-11-26 09:40:18] 2025-11-26 17:39:45,860 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 09:40:18] 2025-11-26 17:39:45,860 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 09:40:18] 2025-11-26 17:39:45,860 | INFO     | update_server=False
[2025-11-26 09:40:18] 2025-11-26 17:39:45,860 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 09:40:18] 2025-11-26 17:39:45,860 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 09:40:18] 2025-11-26 17:39:45,861 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 09:40:18] 2025-11-26 17:39:45,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 09:40:18] 2025-11-26 17:39:45,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 09:40:18] 2025-11-26 17:39:45,862 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:40:18] 2025-11-26 17:39:46,255 | INFO     | all payload control threads have been joined
[2025-11-26 09:40:18] 2025-11-26 17:39:46,322 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 09:40:18] 2025-11-26 17:39:46,323 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 09:40:18] 2025-11-26 17:39:46,323 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 09:40:18] 2025-11-26 17:39:46,323 | INFO     | will abort loop
[2025-11-26 09:40:18] 2025-11-26 17:39:46,429 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 09:40:18] 2025-11-26 17:39:46,452 | INFO     | all data control threads have been joined
[2025-11-26 09:40:18] 2025-11-26 17:39:46,865 | INFO     | [job] retrieve thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:46,877 | INFO     | [job] queue monitor thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:47,053 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 09:40:18] 2025-11-26 17:39:47,204 | INFO     | [data] copytool_in thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:47,259 | INFO     | [payload] control thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:47,328 | INFO     | [job] job monitor thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:47,456 | INFO     | [data] control thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:47,483 | INFO     | [payload] validate_post thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:47,553 | INFO     | all job control threads have been joined
[2025-11-26 09:40:18] 2025-11-26 17:39:47,808 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:47,932 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:47,972 | INFO     | [job] validate thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:48,175 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:48,211 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:48,434 | INFO     | [data] copytool_out thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:48,441 | INFO     | [payload] failed_post thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:48,559 | INFO     | [job] control thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:39:51,059 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 09:40:18] 2025-11-26 17:40:11,605 | INFO     | [monitor] cgroup control has ended
[2025-11-26 09:40:18] 2025-11-26 17:40:13,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140047520347968)>', '<ExcThread(monitor, started 140046392878848)>']
[2025-11-26 09:40:18] 2025-11-26 17:40:14,032 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 09:40:18] 2025-11-26 17:40:14,032 | INFO     | [monitor] control thread has ended
[2025-11-26 09:40:18] 2025-11-26 17:40:18,158 | INFO     | all workflow threads have been joined
[2025-11-26 09:40:18] 2025-11-26 17:40:18,158 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 09:40:18] 2025-11-26 17:40:18,159 | INFO     | traces error code: 0
[2025-11-26 09:40:18] 2025-11-26 17:40:18,159 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 09:40:18] 2025-11-26 17:40:18,294 [wrapper] ==== pilot stdout END ====
[2025-11-26 09:40:18] 2025-11-26 17:40:18,296 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 09:40:18] 2025-11-26 17:40:18,298 [wrapper] pilotpid: 788354
[2025-11-26 09:40:18] 2025-11-26 17:40:18,299 [wrapper] Pilot exit status: 0
[2025-11-26 09:40:18] 2025-11-26 17:40:18,307 [wrapper] pandaids: 6897531543
[2025-11-26 09:40:18] 2025-11-26 17:40:18,355 [wrapper] cleanup supervisor_pilot  788360 788355
[2025-11-26 09:40:18] 2025-11-26 17:40:18,358 [wrapper] Test setup, not cleaning
[2025-11-26 09:40:18] 2025-11-26 17:40:18,360 [wrapper] apfmon messages muted
[2025-11-26 09:40:18] 2025-11-26 17:40:18,362 [wrapper] ==== wrapper stdout END ====
[2025-11-26 09:40:18] 2025-11-26 17:40:18,364 [wrapper] ==== wrapper stderr END ====
[2025-11-26 09:40:18]  *** Error codes and diagnostics ***
[2025-11-26 09:40:18]     "exeErrorCode": 65,
[2025-11-26 09:40:18]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-26 09:40:18]     "pilotErrorCode": 1305,
[2025-11-26 09:40:18]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-26 09:40:18]  *** Listing of results directory ***
[2025-11-26 09:40:18] total 403396
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc    576529 Nov 25 08:48 pilot3.tar.gz
[2025-11-26 09:40:18] -rwx------. 1 boinc boinc     36292 Nov 25 09:01 runpilot2-wrapper.sh
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc      5112 Nov 25 09:02 queuedata.json
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc       100 Nov 26 09:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 09:40:18] -rwxr-xr-x. 1 boinc boinc      7986 Nov 26 09:35 run_atlas
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc       105 Nov 26 09:35 job.xml
[2025-11-26 09:40:18] -rw-r--r--. 2 boinc boinc 408876168 Nov 26 09:35 EVNT.47483658._003110.pool.root.1
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc      6594 Nov 26 09:35 init_data.xml
[2025-11-26 09:40:18] -rw-r--r--. 2 boinc boinc     15847 Nov 26 09:35 start_atlas.sh
[2025-11-26 09:40:18] drwxrwx--x. 2 boinc boinc      4096 Nov 26 09:35 shared
[2025-11-26 09:40:18] -rw-r--r--. 2 boinc boinc    590108 Nov 26 09:35 input.tar.gz
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc         0 Nov 26 09:35 boinc_lockfile
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc      2785 Nov 26 09:35 pandaJob.out
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc    991530 Nov 26 09:36 agis_schedconf.cvmfs.json
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc   1516240 Nov 26 09:36 agis_ddmendpoints.agis.ALL.json
[2025-11-26 09:40:18] drwx------. 5 boinc boinc      4096 Nov 26 09:36 pilot3
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc       523 Nov 26 09:37 boinc_task_state.xml
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc       962 Nov 26 09:37 memory_monitor_summary.json
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc     48645 Nov 26 09:37 log.47556173._000860.job.log.tgz.1
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc        95 Nov 26 09:39 pilot_heartbeat.json
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc     10325 Nov 26 09:39 heartbeat.json
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc        23 Nov 26 09:40 wrapper_checkpoint.txt
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc      8192 Nov 26 09:40 boinc_mmap_file
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc      4737 Nov 26 09:40 pilotlog.txt
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc     94332 Nov 26 09:40 log.47556173._000860.job.log.1
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc       186 Nov 26 09:40 output.list
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc       620 Nov 26 09:40 runtime_log
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc    163840 Nov 26 09:40 result.tar.gz
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc      8636 Nov 26 09:40 runtime_log.err
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc       644 Nov 26 09:40 oFMKDmsaBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmMeJKDmUnqNHo.diag
[2025-11-26 09:40:18] -rw-r--r--. 1 boinc boinc     22335 Nov 26 09:40 stderr.txt
[2025-11-26 09:40:18] No HITS result produced
[2025-11-26 09:40:18]  *** Contents of shared directory: ***
[2025-11-26 09:40:18] total 400056
[2025-11-26 09:40:18] -rw-r--r--. 2 boinc boinc 408876168 Nov 26 09:35 ATLAS.root_0
[2025-11-26 09:40:18] -rw-r--r--. 2 boinc boinc     15847 Nov 26 09:35 start_atlas.sh
[2025-11-26 09:40:18] -rw-r--r--. 2 boinc boinc    590108 Nov 26 09:35 input.tar.gz
[2025-11-26 09:40:18] -rw-------. 1 boinc boinc    163840 Nov 26 09:40 result.tar.gz
09:40:20 (784656): run_atlas exited; CPU time 41.482150
09:40:20 (784656): called boinc_finish(0)

</stderr_txt>
]]>

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