Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:27:29 (2592478): wrapper (7.7.26015): starting
21:27:29 (2592478): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 21:27:29] Arguments: --nthreads 8
[2025-11-26 21:27:29] Threads: 8
[2025-11-26 21:27:29] Checking for CVMFS
[2025-11-26 21:27:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 21:27:30] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 21:27:30] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 21:27:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 21:27:31] 2.13.3.0 12977 30887 357680 153343 2 263 19892971 32935936 45376 16776704 0 167767698 99.571 182369258 32496 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 21:27:31] CVMFS is ok
[2025-11-26 21:27:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 21:27:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 21:27:31] Further information can be found at the LHC@home message board.
[2025-11-26 21:27:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 21:27:31] Checking for apptainer binary...
[2025-11-26 21:27:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 21:27:31] Running /usr/bin/apptainer --version
[2025-11-26 21:27:31] apptainer version 1.4.4-1.el9
[2025-11-26 21:27:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 21:27:32] c6-12-29-1.aglt2.org
[2025-11-26 21:27:32] apptainer works
[2025-11-26 21:27:32] Set ATHENA_PROC_NUMBER=8
[2025-11-26 21:27:32] Set ATHENA_CORE_NUMBER=8
[2025-11-26 21:27:32] Starting ATLAS job with PandaID=6897487253
[2025-11-26 21:27:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 17:35:30]  *** The last 200 lines of the pilot log: ***
[2025-11-27 17:35:30] 2025-11-27 22:34:37,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:35:30] 2025-11-27 22:34:38,547 | INFO     | time since job start (72346s) is within the limit (172800.0s)
[2025-11-27 17:35:30] 2025-11-27 22:34:40,182 | INFO     | monitor loop #3838: job 0:6897487253 is in state 'finished'
[2025-11-27 17:35:30] 2025-11-27 22:34:40,183 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:35:30] 2025-11-27 22:34:40,567 | INFO     | time since job start (72348s) is within the limit (172800.0s)
[2025-11-27 17:35:30] 2025-11-27 22:34:42,591 | INFO     | time since job start (72350s) is within the limit (172800.0s)
[2025-11-27 17:35:30] 2025-11-27 22:34:42,689 | INFO     | monitor loop #3839: job 0:6897487253 is in state 'finished'
[2025-11-27 17:35:30] 2025-11-27 22:34:42,690 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:35:30] 2025-11-27 22:34:44,598 | INFO     | time since job start (72352s) is within the limit (172800.0s)
[2025-11-27 17:35:30] 2025-11-27 22:34:44,599 | INFO     | 72358s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-27 17:35:30] 2025-11-27 22:34:45,225 | INFO     | monitor loop #3840: job 0:6897487253 is in state 'finished'
[2025-11-27 17:35:30] 2025-11-27 22:34:45,226 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:35:30] 2025-11-27 22:34:47,823 | INFO     | monitor loop #3841: job 0:6897487253 is in state 'finished'
[2025-11-27 17:35:30] 2025-11-27 22:34:47,824 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 17:35:30] 2025-11-27 22:34:48,451 | INFO     | PID=2600614 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:35:30] 2025-11-27 22:34:48,451 | INFO     | .. there are 68 such processes running
[2025-11-27 17:35:30] 2025-11-27 22:34:49,392 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 17:35:30] 2025-11-27 22:34:49,420 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2672.838375000001
[2025-11-27 17:35:30] 2025-11-27 22:34:49,476 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6897487253/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 17:35:30] 2025-11-27 22:34:49,477 | INFO     | extracted standard info from prmon json
[2025-11-27 17:35:30] 2025-11-27 22:34:49,477 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 17:35:30] 2025-11-27 22:34:49,477 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 17:35:30] 2025-11-27 22:34:49,509 | INFO     | time since job start (72357s) is within the limit (172800.0s)
[2025-11-27 17:35:30] 2025-11-27 22:34:49,665 | INFO     | fitting pss+swap vs Time
[2025-11-27 17:35:30] 2025-11-27 22:34:49,671 | INFO     | sum of square deviations: 513389766705.9022
[2025-11-27 17:35:30] 2025-11-27 22:34:49,731 | INFO     | sum of deviations: 2493452003496.461
[2025-11-27 17:35:30] 2025-11-27 22:34:49,731 | INFO     | mean x: 1764246731.8833475
[2025-11-27 17:35:30] 2025-11-27 22:34:49,731 | INFO     | mean y: 2910333.6120033814
[2025-11-27 17:35:30] 2025-11-27 22:34:49,731 | INFO     | intersect: -8565753931.947153
[2025-11-27 17:35:30] 2025-11-27 22:34:49,733 | INFO     | chi2: 23.018563273644975
[2025-11-27 17:35:30] 2025-11-27 22:34:49,739 | INFO     | sum of square deviations: 506908547950.59143
[2025-11-27 17:35:30] 2025-11-27 22:34:49,795 | INFO     | sum of deviations: 2880206080406.241
[2025-11-27 17:35:30] 2025-11-27 22:34:49,795 | INFO     | mean x: 1764246579.3913412
[2025-11-27 17:35:30] 2025-11-27 22:34:49,795 | INFO     | mean y: 2919431.455008489
[2025-11-27 17:35:30] 2025-11-27 22:34:49,795 | INFO     | intersect: -10021361567.24328
[2025-11-27 17:35:30] 2025-11-27 22:34:49,797 | INFO     | chi2: 19.853311920821454
[2025-11-27 17:35:30] 2025-11-27 22:34:49,797 | INFO     | current chi2=19.853311920821454 (change=13.750864096924609 %)
[2025-11-27 17:35:30] 2025-11-27 22:34:49,797 | INFO     | right removable region: 1177
[2025-11-27 17:35:30] 2025-11-27 22:34:49,803 | INFO     | sum of square deviations: 506907188870.5914
[2025-11-27 17:35:30] 2025-11-27 22:34:49,859 | INFO     | sum of deviations: 2031461105766.8271
[2025-11-27 17:35:30] 2025-11-27 22:34:49,859 | INFO     | mean x: 1764246884.3913412
[2025-11-27 17:35:30] 2025-11-27 22:34:49,859 | INFO     | mean y: 2921199.8463497455
[2025-11-27 17:35:30] 2025-11-27 22:34:49,859 | INFO     | intersect: -7067404503.359006
[2025-11-27 17:35:30] 2025-11-27 22:34:49,861 | INFO     | chi2: 19.241947641487446
[2025-11-27 17:35:30] 2025-11-27 22:34:49,861 | INFO     | current chi2=19.241947641487446 (change=16.40682603540922 %)
[2025-11-27 17:35:30] 2025-11-27 22:34:49,861 | INFO     | left removable region: 10
[2025-11-27 17:35:30] 2025-11-27 22:34:49,867 | INFO     | sum of square deviations: 492839687952.3725
[2025-11-27 17:35:30] 2025-11-27 22:34:49,919 | INFO     | sum of deviations: 2093781238509.2358
[2025-11-27 17:35:30] 2025-11-27 22:34:49,919 | INFO     | mean x: 1764246853.9091687
[2025-11-27 17:35:30] 2025-11-27 22:34:49,919 | INFO     | mean y: 2941654.3984575835
[2025-11-27 17:35:30] 2025-11-27 22:34:49,919 | INFO     | intersect: -7492288646.881462
[2025-11-27 17:35:30] 2025-11-27 22:34:49,925 | INFO     | chi2: 12.734623383029321
[2025-11-27 17:35:30] 2025-11-27 22:34:49,925 | INFO     | current memory leak: 4.25 B/s (using 1167 data points, chi2=12.73)
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | could have reported an average CPU frequency of 2677 MHz (43 samples)
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | ..............................
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | . Timing measurements:
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | . get job = 0 s
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | . initial setup = 6 s
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | . payload setup = 47 s
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | . stage-in = 1 s
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | . payload execution = 72188 s
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | . stage-out = 16 s
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | . log creation = 5 s
[2025-11-27 17:35:30] 2025-11-27 22:34:49,927 | INFO     | ..............................
[2025-11-27 17:35:30] 2025-11-27 22:34:50,250 | INFO     | 
[2025-11-27 17:35:30] 2025-11-27 22:34:50,250 | INFO     | job summary report
[2025-11-27 17:35:30] 2025-11-27 22:34:50,252 | INFO     | --------------------------------------------------
[2025-11-27 17:35:30] 2025-11-27 22:34:50,252 | INFO     | PanDA job id: 6897487253
[2025-11-27 17:35:30] 2025-11-27 22:34:50,252 | INFO     | task id: 47556161
[2025-11-27 17:35:30] 2025-11-27 22:34:50,252 | INFO     | errors: (none)
[2025-11-27 17:35:30] 2025-11-27 22:34:50,252 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 17:35:30] 2025-11-27 22:34:50,252 | INFO     | pilot state: finished 
[2025-11-27 17:35:30] 2025-11-27 22:34:50,252 | INFO     | transexitcode: 0
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | exeerrorcode: 0
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | exeerrordiag: 
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | exitcode: 0
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | exitmsg: OK
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | cpuconsumptiontime: 270988 s
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | nevents: 1000
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | neventsw: 0
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | pid: 2631076
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | pgrp: 2631076
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | corecount: 8
[2025-11-27 17:35:30] 2025-11-27 22:34:50,253 | INFO     | event service: False
[2025-11-27 17:35:30] 2025-11-27 22:34:50,254 | INFO     | sizes: {0: 2284038, 1: 2284122, 2: 2284321, 3: 2284321, 13: 2284349, 25: 2284405, 35: 2284823, 36: 2284851, 72238: 2341780, 72239: 2341779, 72256: 2350829, 72259: 
[2025-11-27 17:35:30] 2025-11-27 22:34:50,254 | INFO     | --------------------------------------------------
[2025-11-27 17:35:30] 2025-11-27 22:34:50,254 | INFO     | 
[2025-11-27 17:35:30] 2025-11-27 22:34:50,254 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-27 17:35:30] 2025-11-27 22:34:50,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,303 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,305 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 17:35:30] 2025-11-27 22:34:50,305 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,305 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 17:35:30] 2025-11-27 22:34:50,305 | INFO     | job 6897487253 has completed (purged errors)
[2025-11-27 17:35:30] 2025-11-27 22:34:50,305 | INFO     | overall cleanup function is called
[2025-11-27 17:35:30] 2025-11-27 22:34:51,337 | INFO     | --- collectZombieJob: --- 10, [2631076]
[2025-11-27 17:35:30] 2025-11-27 22:34:51,338 | INFO     | zombie collector waiting for pid 2631076
[2025-11-27 17:35:30] 2025-11-27 22:34:51,338 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 17:35:30] 2025-11-27 22:34:51,338 | INFO     | collected zombie processes
[2025-11-27 17:35:30] 2025-11-27 22:34:51,338 | INFO     | will attempt to kill all subprocesses of pid=2631076
[2025-11-27 17:35:30] 2025-11-27 22:34:54,442 | INFO     | process IDs to be killed: [2631076] (in reverse order)
[2025-11-27 17:35:30] 2025-11-27 22:34:55,107 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 17:35:30] 2025-11-27 22:34:55,107 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 17:35:30] 2025-11-27 22:34:55,161 | INFO     | did not find any defunct processes belonging to 2631076
[2025-11-27 17:35:30] 2025-11-27 22:34:55,218 | INFO     | did not find any defunct processes belonging to 2631076
[2025-11-27 17:35:30] 2025-11-27 22:34:55,224 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 17:35:30] 2025-11-27 22:34:55,224 | INFO     | ready for new job
[2025-11-27 17:35:30] 2025-11-27 22:34:55,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 17:35:30] 2025-11-27 22:34:55,233 | INFO     | ***************************************
[2025-11-27 17:35:30] 2025-11-27 22:34:55,239 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 17:35:30] 2025-11-27 22:34:55,240 | INFO     | ***************************************
[2025-11-27 17:35:30] 2025-11-27 22:34:55,240 | INFO     | 
[2025-11-27 17:35:30] 2025-11-27 22:34:55,249 | INFO     | architecture information:
[2025-11-27 17:35:30] 2025-11-27 22:34:55,254 | INFO     | executing command: cat /etc/os-release
[2025-11-27 17:35:30] 2025-11-27 22:34:55,393 | INFO     | cat /etc/os-release:
[2025-11-27 17:35:30] NAME="CentOS Linux"
[2025-11-27 17:35:30] VERSION="7 (Core)"
[2025-11-27 17:35:30] ID="centos"
[2025-11-27 17:35:30] ID_LIKE="rhel fedora"
[2025-11-27 17:35:30] VERSION_ID="7"
[2025-11-27 17:35:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 17:35:30] ANSI_COLOR="0;31"
[2025-11-27 17:35:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 17:35:30] HOME_URL="https://www.centos.org/"
[2025-11-27 17:35:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 17:35:30] 
[2025-11-27 17:35:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 17:35:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 17:35:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 17:35:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 17:35:30] 
[2025-11-27 17:35:30] 2025-11-27 22:34:55,393 | INFO     | ***************************************
[2025-11-27 17:35:30] 2025-11-27 22:34:55,899 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-27 17:35:30] 2025-11-27 22:34:56,068 | INFO     | sufficient remaining disk space (85916123136 B)
[2025-11-27 17:35:30] 2025-11-27 22:34:56,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 17:35:30] 2025-11-27 22:34:56,069 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 17:35:30] 2025-11-27 22:34:56,069 | INFO     | update_server=False
[2025-11-27 17:35:30] 2025-11-27 22:34:56,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 17:35:30] 2025-11-27 22:34:56,069 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:35:30] 2025-11-27 22:34:56,442 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 17:35:30] 2025-11-27 22:34:56,445 | INFO     | aborting loop
[2025-11-27 17:35:30] 2025-11-27 22:34:56,511 | INFO     | all payload control threads have been joined
[2025-11-27 17:35:30] 2025-11-27 22:34:56,661 | INFO     | all data control threads have been joined
[2025-11-27 17:35:30] 2025-11-27 22:34:56,722 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 17:35:30] 2025-11-27 22:34:56,932 | INFO     | all job control threads have been joined
[2025-11-27 17:35:30] 2025-11-27 22:34:57,076 | INFO     | [job] queue monitor thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:57,084 | INFO     | [job] retrieve thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:57,092 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 17:35:30] 2025-11-27 22:34:57,314 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:57,455 | INFO     | [job] job monitor thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:57,517 | INFO     | [payload] control thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:57,667 | INFO     | [data] control thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:57,720 | INFO     | [job] validate thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:57,721 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:57,938 | INFO     | [job] control thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:58,269 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:58,351 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:58,352 | INFO     | [data] copytool_in thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:58,653 | INFO     | [payload] failed_post thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:58,654 | INFO     | [payload] validate_post thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:34:58,742 | INFO     | [data] copytool_out thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:35:01,121 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 17:35:30] 2025-11-27 22:35:03,997 | INFO     | [monitor] cgroup control has ended
[2025-11-27 17:35:30] 2025-11-27 22:35:04,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140066297550656)>', '<ExcThread(monitor, started 140065409832704)>']
[2025-11-27 17:35:30] 2025-11-27 22:35:09,435 | INFO     | all workflow threads have been joined
[2025-11-27 17:35:30] 2025-11-27 22:35:09,436 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 17:35:30] 2025-11-27 22:35:09,436 | INFO     | traces error code: 0
[2025-11-27 17:35:30] 2025-11-27 22:35:09,436 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 17:35:30] 2025-11-27 22:35:28,835 | INFO     | PID=2600614 has CPU usage=5.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 17:35:30] 2025-11-27 22:35:28,835 | INFO     | .. there are 68 such processes running
[2025-11-27 17:35:30] 2025-11-27 22:35:28,836 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 17:35:30] 2025-11-27 22:35:28,836 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 17:35:30] 2025-11-27 22:35:28,837 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 17:35:30] 2025-11-27 22:35:28,837 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 17:35:30] 2025-11-27 22:35:28,837 | INFO     | [monitor] control thread has ended
[2025-11-27 17:35:30] 2025-11-27 22:35:29,352 [wrapper] ==== pilot stdout END ====
[2025-11-27 17:35:30] 2025-11-27 22:35:29,412 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 17:35:30] 2025-11-27 22:35:29,447 [wrapper] pilotpid: 2600614
[2025-11-27 17:35:30] 2025-11-27 22:35:29,464 [wrapper] Pilot exit status: 0
[2025-11-27 17:35:30] 2025-11-27 22:35:29,643 [wrapper] pandaids: 6897487253
[2025-11-27 17:35:30] 2025-11-27 22:35:30,002 [wrapper] cleanup supervisor_pilot 3424805 2600615
[2025-11-27 17:35:30] 2025-11-27 22:35:30,015 [wrapper] Test setup, not cleaning
[2025-11-27 17:35:30] 2025-11-27 22:35:30,033 [wrapper] apfmon messages muted
[2025-11-27 17:35:30] 2025-11-27 22:35:30,053 [wrapper] ==== wrapper stdout END ====
[2025-11-27 17:35:30] 2025-11-27 22:35:30,111 [wrapper] ==== wrapper stderr END ====
[2025-11-27 17:35:30]  *** Error codes and diagnostics ***
[2025-11-27 17:35:30]     "exeErrorCode": 0,
[2025-11-27 17:35:30]     "exeErrorDiag": "",
[2025-11-27 17:35:30]     "pilotErrorCode": 0,
[2025-11-27 17:35:30]     "pilotErrorDiag": "",
[2025-11-27 17:35:30]  *** Listing of results directory ***
[2025-11-27 17:35:30] total 1338708
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-27 17:35:30] -rwx------. 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas       100 Nov 26 21:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 17:35:30] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 21:27 run_atlas
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas       105 Nov 26 21:27 job.xml
[2025-11-27 17:35:30] -rw-r--r--. 2 boincer umatlas 411586819 Nov 26 21:27 EVNT.47483658._002247.pool.root.1
[2025-11-27 17:35:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 21:27 start_atlas.sh
[2025-11-27 17:35:30] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 21:27 shared
[2025-11-27 17:35:30] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 21:27 input.tar.gz
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas         0 Nov 26 21:27 boinc_lockfile
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas      2786 Nov 26 21:27 pandaJob.out
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas        57 Nov 26 21:27 setup.sh.local
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas    991554 Nov 26 21:28 agis_schedconf.cvmfs.json
[2025-11-27 17:35:30] drwx------. 5 boincer umatlas      4096 Nov 26 21:28 pilot3
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas       533 Nov 27 17:01 boinc_task_state.xml
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas      6882 Nov 27 17:27 init_data.xml
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas 933908306 Nov 27 17:32 HITS.47556161._002308.pool.root.1
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas      1058 Nov 27 17:33 memory_monitor_summary.json
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas   1516240 Nov 27 17:34 agis_ddmendpoints.agis.ALL.json
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas   2239693 Nov 27 17:34 log.47556161._002308.job.log.tgz.1
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas      8627 Nov 27 17:34 heartbeat.json
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 17:35 boinc_mmap_file
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas        29 Nov 27 17:35 wrapper_checkpoint.txt
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas        95 Nov 27 17:35 pilot_heartbeat.json
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas       823 Nov 27 17:35 pilotlog.txt
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas   8473632 Nov 27 17:35 log.47556161._002308.job.log.1
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas       353 Nov 27 17:35 output.list
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas       620 Nov 27 17:35 runtime_log
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas  10731520 Nov 27 17:35 result.tar.gz
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas      9353 Nov 27 17:35 runtime_log.err
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas       662 Nov 27 17:35 l7cLDmGXBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmSbJKDm8A9Vem.diag
[2025-11-27 17:35:30] -rw-r--r--. 1 boincer umatlas     21923 Nov 27 17:35 stderr.txt
[2025-11-27 17:35:30] HITS file was successfully produced:
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas 933908306 Nov 27 17:32 shared/HITS.pool.root.1
[2025-11-27 17:35:30]  *** Contents of shared directory: ***
[2025-11-27 17:35:30] total 1325048
[2025-11-27 17:35:30] -rw-r--r--. 2 boincer umatlas 411586819 Nov 26 21:27 ATLAS.root_0
[2025-11-27 17:35:30] -rw-r--r--. 2 boincer umatlas     15847 Nov 26 21:27 start_atlas.sh
[2025-11-27 17:35:30] -rw-r--r--. 2 boincer umatlas    590106 Nov 26 21:27 input.tar.gz
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas 933908306 Nov 27 17:32 HITS.pool.root.1
[2025-11-27 17:35:30] -rw-------. 1 boincer umatlas  10731520 Nov 27 17:35 result.tar.gz
17:35:32 (2592478): run_atlas exited; CPU time 274319.468540
17:35:32 (2592478): called boinc_finish(0)

</stderr_txt>
]]>

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