Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
14:09:27 (2586977): wrapper (7.7.26015): starting
14:09:27 (2586977): wrapper: running run_atlas (--nthreads 8)
[2025-11-26 14:09:27] Arguments: --nthreads 8
[2025-11-26 14:09:27] Threads: 8
[2025-11-26 14:09:27] Checking for CVMFS
[2025-11-26 14:09:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 14:09:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 14:09:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 14:09:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 14:09:27] 2.13.2.0 3460 2946 59712 153334 1 90 3177366 4096000 4140 130560 0 7011775 99.765 1340560 895 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-26 14:09:27] CVMFS is ok
[2025-11-26 14:09:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 14:09:27] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-26 14:09:27] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-26 14:09:27] Further information can be found at the LHC@home message board.
[2025-11-26 14:09:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 14:09:27] Checking for apptainer binary...
[2025-11-26 14:09:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 14:09:27] Running /usr/bin/apptainer --version
[2025-11-26 14:09:27] apptainer version 1.4.3
[2025-11-26 14:09:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 14:09:27] painter
[2025-11-26 14:09:27] apptainer works
[2025-11-26 14:09:27] Set ATHENA_PROC_NUMBER=8
[2025-11-26 14:09:27] Set ATHENA_CORE_NUMBER=8
[2025-11-26 14:09:27] Starting ATLAS job with PandaID=6897488204
[2025-11-26 14:09:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 18:19:06]  *** The last 200 lines of the pilot log: ***
[2025-11-26 18:19:06] 2025-11-27 01:18:16,961 | INFO     | monitor loop #1120: job 0:6897488204 is in state 'finished'
[2025-11-26 18:19:06] 2025-11-27 01:18:16,961 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 18:19:06] 2025-11-27 01:18:17,819 | INFO     | time since job start (14921s) is within the limit (172800.0s)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,686 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 18:19:06] 2025-11-27 01:18:18,689 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4521.617375000001
[2025-11-26 18:19:06] 2025-11-27 01:18:18,691 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6897488204/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,692 | INFO     | extracted standard info from prmon json
[2025-11-26 18:19:06] 2025-11-27 01:18:18,692 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 18:19:06] 2025-11-27 01:18:18,692 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 18:19:06] 2025-11-27 01:18:18,694 | INFO     | fitting pss+swap vs Time
[2025-11-26 18:19:06] 2025-11-27 01:18:18,694 | INFO     | sum of square deviations: 4560065872.081631
[2025-11-26 18:19:06] 2025-11-27 01:18:18,695 | INFO     | sum of deviations: 103406095954.4694
[2025-11-26 18:19:06] 2025-11-27 01:18:18,695 | INFO     | mean x: 1764198838.0612245
[2025-11-26 18:19:06] 2025-11-27 01:18:18,695 | INFO     | mean y: 2831772.5020408165
[2025-11-26 18:19:06] 2025-11-27 01:18:18,695 | INFO     | intersect: -40002931181.1031
[2025-11-26 18:19:06] 2025-11-27 01:18:18,695 | INFO     | chi2: 4.559028397533262
[2025-11-26 18:19:06] 2025-11-27 01:18:18,695 | INFO     | sum of square deviations: 4286539737.0625
[2025-11-26 18:19:06] 2025-11-27 01:18:18,696 | INFO     | sum of deviations: 159387404938.31253
[2025-11-26 18:19:06] 2025-11-27 01:18:18,696 | INFO     | mean x: 1764198685.5625
[2025-11-26 18:19:06] 2025-11-27 01:18:18,696 | INFO     | mean y: 2862755.279166667
[2025-11-26 18:19:06] 2025-11-27 01:18:18,696 | INFO     | intersect: -65595747670.7809
[2025-11-26 18:19:06] 2025-11-27 01:18:18,696 | INFO     | chi2: 2.36306982146549
[2025-11-26 18:19:06] 2025-11-27 01:18:18,696 | INFO     | current chi2=2.36306982146549 (change=48.16724934760072 %)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,696 | INFO     | sum of square deviations: 4024161961.1659565
[2025-11-26 18:19:06] 2025-11-27 01:18:18,697 | INFO     | sum of deviations: 153936276136.73184
[2025-11-26 18:19:06] 2025-11-27 01:18:18,697 | INFO     | mean x: 1764198533.0595744
[2025-11-26 18:19:06] 2025-11-27 01:18:18,697 | INFO     | mean y: 2859586.519148936
[2025-11-26 18:19:06] 2025-11-27 01:18:18,697 | INFO     | intersect: -67483030684.75369
[2025-11-26 18:19:06] 2025-11-27 01:18:18,697 | INFO     | chi2: 2.361057067890971
[2025-11-26 18:19:06] 2025-11-27 01:18:18,697 | INFO     | current chi2=2.361057067890971 (change=0.08517537468576016 %)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,697 | INFO     | right removable region: 234
[2025-11-26 18:19:06] 2025-11-27 01:18:18,698 | INFO     | sum of square deviations: 4286530587.0625
[2025-11-26 18:19:06] 2025-11-27 01:18:18,698 | INFO     | sum of deviations: 37632169964.18758
[2025-11-26 18:19:06] 2025-11-27 01:18:18,698 | INFO     | mean x: 1764198990.5625
[2025-11-26 18:19:06] 2025-11-27 01:18:18,698 | INFO     | mean y: 2868259.8875
[2025-11-26 18:19:06] 2025-11-27 01:18:18,698 | INFO     | intersect: -15485330159.569653
[2025-11-26 18:19:06] 2025-11-27 01:18:18,698 | INFO     | chi2: 2.3037158317638133
[2025-11-26 18:19:06] 2025-11-27 01:18:18,698 | INFO     | current chi2=2.3037158317638133 (change=49.469149325538815 %)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,699 | INFO     | sum of square deviations: 4024158302.0425525
[2025-11-26 18:19:06] 2025-11-27 01:18:18,699 | INFO     | sum of deviations: 25946643940.042526
[2025-11-26 18:19:06] 2025-11-27 01:18:18,699 | INFO     | mean x: 1764199143.06383
[2025-11-26 18:19:06] 2025-11-27 01:18:18,699 | INFO     | mean y: 2875042.663829787
[2025-11-26 18:19:06] 2025-11-27 01:18:18,699 | INFO     | intersect: -11372186167.321667
[2025-11-26 18:19:06] 2025-11-27 01:18:18,700 | INFO     | chi2: 2.2740373466814696
[2025-11-26 18:19:06] 2025-11-27 01:18:18,700 | INFO     | current chi2=2.2740373466814696 (change=1.2882875862176426 %)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,700 | INFO     | left removable region: 20
[2025-11-26 18:19:06] 2025-11-27 01:18:18,700 | INFO     | sum of square deviations: 3038839726.710274
[2025-11-26 18:19:06] 2025-11-27 01:18:18,700 | INFO     | sum of deviations: 60642961674.448586
[2025-11-26 18:19:06] 2025-11-27 01:18:18,700 | INFO     | mean x: 1764199112.5607476
[2025-11-26 18:19:06] 2025-11-27 01:18:18,700 | INFO     | mean y: 2916572.196261682
[2025-11-26 18:19:06] 2025-11-27 01:18:18,700 | INFO     | intersect: -35203368981.05227
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | chi2: 0.01048124678557671
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | current memory leak: 19.96 B/s (using 214 data points, chi2=0.01)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | could have reported an average CPU frequency of 4653 MHz (12 samples)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | ..............................
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | . Timing measurements:
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | . get job = 0 s
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | . initial setup = 5 s
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | . payload setup = 2 s
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | . stage-in = 0 s
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | . payload execution = 14888 s
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | . stage-out = 8 s
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | . log creation = 0 s
[2025-11-26 18:19:06] 2025-11-27 01:18:18,701 | INFO     | ..............................
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | 
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | job summary report
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | --------------------------------------------------
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | PanDA job id: 6897488204
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | task id: 47556161
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | errors: (none)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | pilot state: finished 
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | transexitcode: 0
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | exeerrorcode: 0
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | exeerrordiag: 
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | exitcode: 0
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | exitmsg: OK
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | cpuconsumptiontime: 106700 s
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | nevents: 1000
[2025-11-26 18:19:06] 2025-11-27 01:18:18,743 | INFO     | neventsw: 0
[2025-11-26 18:19:06] 2025-11-27 01:18:18,744 | INFO     | pid: 2597494
[2025-11-26 18:19:06] 2025-11-27 01:18:18,744 | INFO     | pgrp: 2597494
[2025-11-26 18:19:06] 2025-11-27 01:18:18,744 | INFO     | corecount: 8
[2025-11-26 18:19:06] 2025-11-27 01:18:18,744 | INFO     | event service: False
[2025-11-26 18:19:06] 2025-11-27 01:18:18,744 | INFO     | sizes: {0: 2284101, 1: 2284300, 3: 2284562, 11: 2284590, 14895: 2316681, 14903: 2325689, 14907: 2325873, 14909: 2326119}
[2025-11-26 18:19:06] 2025-11-27 01:18:18,744 | INFO     | --------------------------------------------------
[2025-11-26 18:19:06] 2025-11-27 01:18:18,744 | INFO     | 
[2025-11-26 18:19:06] 2025-11-27 01:18:18,744 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 18:19:06] 2025-11-27 01:18:18,757 | INFO     | job 6897488204 has completed (purged errors)
[2025-11-26 18:19:06] 2025-11-27 01:18:18,758 | INFO     | overall cleanup function is called
[2025-11-26 18:19:06] 2025-11-27 01:18:19,770 | INFO     | --- collectZombieJob: --- 10, [2597494]
[2025-11-26 18:19:06] 2025-11-27 01:18:19,770 | INFO     | zombie collector waiting for pid 2597494
[2025-11-26 18:19:06] 2025-11-27 01:18:19,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 18:19:06] 2025-11-27 01:18:19,770 | INFO     | collected zombie processes
[2025-11-26 18:19:06] 2025-11-27 01:18:19,770 | INFO     | will attempt to kill all subprocesses of pid=2597494
[2025-11-26 18:19:06] 2025-11-27 01:18:19,852 | INFO     | process IDs to be killed: [2597494] (in reverse order)
[2025-11-26 18:19:06] 2025-11-27 01:18:19,890 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 18:19:06] 2025-11-27 01:18:19,890 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 18:19:06] 2025-11-27 01:18:19,893 | INFO     | did not find any defunct processes belonging to 2597494
[2025-11-26 18:19:06] 2025-11-27 01:18:19,896 | INFO     | did not find any defunct processes belonging to 2597494
[2025-11-26 18:19:06] 2025-11-27 01:18:19,896 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 18:19:06] 2025-11-27 01:18:19,896 | INFO     | ready for new job
[2025-11-26 18:19:06] 2025-11-27 01:18:19,897 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 18:19:06] 2025-11-27 01:18:19,898 | INFO     | ***************************************
[2025-11-26 18:19:06] 2025-11-27 01:18:19,898 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 18:19:06] 2025-11-27 01:18:19,898 | INFO     | ***************************************
[2025-11-26 18:19:06] 2025-11-27 01:18:19,898 | INFO     | 
[2025-11-26 18:19:06] 2025-11-27 01:18:19,899 | INFO     | architecture information:
[2025-11-26 18:19:06] 2025-11-27 01:18:19,899 | INFO     | executing command: cat /etc/os-release
[2025-11-26 18:19:06] 2025-11-27 01:18:19,909 | INFO     | cat /etc/os-release:
[2025-11-26 18:19:06] NAME="CentOS Linux"
[2025-11-26 18:19:06] VERSION="7 (Core)"
[2025-11-26 18:19:06] ID="centos"
[2025-11-26 18:19:06] ID_LIKE="rhel fedora"
[2025-11-26 18:19:06] VERSION_ID="7"
[2025-11-26 18:19:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 18:19:06] ANSI_COLOR="0;31"
[2025-11-26 18:19:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 18:19:06] HOME_URL="https://www.centos.org/"
[2025-11-26 18:19:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 18:19:06] 
[2025-11-26 18:19:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 18:19:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 18:19:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 18:19:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 18:19:06] 
[2025-11-26 18:19:06] 2025-11-27 01:18:19,909 | INFO     | ***************************************
[2025-11-26 18:19:06] 2025-11-27 01:18:20,412 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-11-26 18:19:06] 2025-11-27 01:18:20,423 | INFO     | sufficient remaining disk space (196593319936 B)
[2025-11-26 18:19:06] 2025-11-27 01:18:20,423 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 18:19:06] 2025-11-27 01:18:20,423 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 18:19:06] 2025-11-27 01:18:20,423 | INFO     | update_server=False
[2025-11-26 18:19:06] 2025-11-27 01:18:20,423 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 18:19:06] 2025-11-27 01:18:20,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:19:06] 2025-11-27 01:18:20,469 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 18:19:06] 2025-11-27 01:18:20,469 | INFO     | aborting loop
[2025-11-26 18:19:06] 2025-11-27 01:18:20,888 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 18:19:06] 2025-11-27 01:18:21,099 | INFO     | all data control threads have been joined
[2025-11-26 18:19:06] 2025-11-27 01:18:21,428 | INFO     | [job] retrieve thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:21,429 | INFO     | [job] queue monitor thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:21,435 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:21,453 | INFO     | all payload control threads have been joined
[2025-11-26 18:19:06] 2025-11-27 01:18:21,474 | INFO     | [job] job monitor thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:21,596 | INFO     | [payload] failed_post thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:21,753 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:21,950 | INFO     | all job control threads have been joined
[2025-11-26 18:19:06] 2025-11-27 01:18:22,107 | INFO     | [data] control thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:22,171 | INFO     | [data] copytool_in thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:22,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 18:19:06] 2025-11-27 01:18:22,458 | INFO     | [payload] control thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:22,595 | INFO     | [job] validate thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:22,601 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:22,849 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:22,893 | INFO     | [data] copytool_out thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:22,920 | INFO     | [payload] validate_post thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:22,958 | INFO     | [job] control thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:26,246 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 18:19:06] 2025-11-27 01:18:50,986 | INFO     | PID=2590825 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 18:19:06] 2025-11-27 01:18:50,986 | INFO     | .. there are 4 such processes running
[2025-11-26 18:19:06] 2025-11-27 01:18:50,986 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 18:19:06] 2025-11-27 01:18:50,986 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 18:19:06] 2025-11-27 01:18:50,986 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 18:19:06] 2025-11-27 01:19:01,175 | INFO     | [monitor] cgroup control has ended
[2025-11-26 18:19:06] 2025-11-27 01:19:01,597 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 135581429360448)>', '<ExcThread(monitor, started 135581069715200)>']
[2025-11-26 18:19:06] 2025-11-27 01:19:02,035 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 18:19:06] 2025-11-27 01:19:02,035 | INFO     | [monitor] control thread has ended
[2025-11-26 18:19:06] 2025-11-27 01:19:06,622 | INFO     | all workflow threads have been joined
[2025-11-26 18:19:06] 2025-11-27 01:19:06,622 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 18:19:06] 2025-11-27 01:19:06,622 | INFO     | traces error code: 0
[2025-11-26 18:19:06] 2025-11-27 01:19:06,623 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 18:19:06] 2025-11-27 01:19:06,684 [wrapper] ==== pilot stdout END ====
[2025-11-26 18:19:06] 2025-11-27 01:19:06,686 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 18:19:06] 2025-11-27 01:19:06,688 [wrapper] pilotpid: 2590825
[2025-11-26 18:19:06] 2025-11-27 01:19:06,689 [wrapper] Pilot exit status: 0
[2025-11-26 18:19:06] 2025-11-27 01:19:06,694 [wrapper] pandaids: 6897488204
[2025-11-26 18:19:06] 2025-11-27 01:19:06,718 [wrapper] cleanup supervisor_pilot 2782520 2590826
[2025-11-26 18:19:06] 2025-11-27 01:19:06,720 [wrapper] Test setup, not cleaning
[2025-11-26 18:19:06] 2025-11-27 01:19:06,721 [wrapper] apfmon messages muted
[2025-11-26 18:19:06] 2025-11-27 01:19:06,723 [wrapper] ==== wrapper stdout END ====
[2025-11-26 18:19:06] 2025-11-27 01:19:06,724 [wrapper] ==== wrapper stderr END ====
[2025-11-26 18:19:06]  *** Error codes and diagnostics ***
[2025-11-26 18:19:06]     "exeErrorCode": 0,
[2025-11-26 18:19:06]     "exeErrorDiag": "",
[2025-11-26 18:19:06]     "pilotErrorCode": 0,
[2025-11-26 18:19:06]     "pilotErrorDiag": "",
[2025-11-26 18:19:06]  *** Listing of results directory ***
[2025-11-26 18:19:06] total 1300012
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc    576529 Nov 25 09:48 pilot3.tar.gz
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc      5112 Nov 25 09:55 queuedata.json
[2025-11-26 18:19:06] -rwx------ 1 boinc boinc     36292 Nov 25 09:57 runpilot2-wrapper.sh
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc       100 Nov 26 14:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 18:19:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 14:09 run_atlas
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc       105 Nov 26 14:09 job.xml
[2025-11-26 18:19:06] -rw-r--r-- 2 boinc boinc 408816569 Nov 26 14:09 EVNT.47483658._002263.pool.root.1
[2025-11-26 18:19:06] -rw-r--r-- 2 boinc boinc     15847 Nov 26 14:09 start_atlas.sh
[2025-11-26 18:19:06] drwxrwx--x 2 boinc boinc      4096 Nov 26 14:09 shared
[2025-11-26 18:19:06] -rw-r--r-- 2 boinc boinc    590108 Nov 26 14:09 input.tar.gz
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc      9935 Nov 26 14:09 init_data.xml
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc         0 Nov 26 14:09 boinc_lockfile
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc      2786 Nov 26 14:09 pandaJob.out
[2025-11-26 18:19:06] -rw------- 1 boinc boinc    991538 Nov 26 14:09 agis_schedconf.cvmfs.json
[2025-11-26 18:19:06] drwx------ 5 boinc boinc      4096 Nov 26 14:09 pilot3
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc       532 Nov 26 18:14 boinc_task_state.xml
[2025-11-26 18:19:06] -rw------- 1 boinc boinc 910974414 Nov 26 18:17 HITS.47556161._002465.pool.root.1
[2025-11-26 18:19:06] -rw------- 1 boinc boinc      1044 Nov 26 18:18 memory_monitor_summary.json
[2025-11-26 18:19:06] -rw------- 1 boinc boinc        95 Nov 26 18:18 pilot_heartbeat.json
[2025-11-26 18:19:06] -rw------- 1 boinc boinc   1516240 Nov 26 18:18 agis_ddmendpoints.agis.ALL.json
[2025-11-26 18:19:06] -rw------- 1 boinc boinc   1557905 Nov 26 18:18 log.47556161._002465.job.log.tgz.1
[2025-11-26 18:19:06] -rw------- 1 boinc boinc      8569 Nov 26 18:18 heartbeat.json
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc      8192 Nov 26 18:19 boinc_mmap_file
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc        29 Nov 26 18:19 wrapper_checkpoint.txt
[2025-11-26 18:19:06] -rw------- 1 boinc boinc      4831 Nov 26 18:19 pilotlog.txt
[2025-11-26 18:19:06] -rw------- 1 boinc boinc   2192092 Nov 26 18:19 log.47556161._002465.job.log.1
[2025-11-26 18:19:06] -rw------- 1 boinc boinc       353 Nov 26 18:19 output.list
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc       620 Nov 26 18:19 runtime_log
[2025-11-26 18:19:06] -rw------- 1 boinc boinc   3768320 Nov 26 18:19 result.tar.gz
[2025-11-26 18:19:06] -rw------- 1 boinc boinc       662 Nov 26 18:19 QIbMDmMXBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjXMKDmDnYcZm.diag
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc      8923 Nov 26 18:19 runtime_log.err
[2025-11-26 18:19:06] -rw-r--r-- 1 boinc boinc     21394 Nov 26 18:19 stderr.txt
[2025-11-26 18:19:06] HITS file was successfully produced:
[2025-11-26 18:19:06] -rw------- 1 boinc boinc 910974414 Nov 26 18:17 shared/HITS.pool.root.1
[2025-11-26 18:19:06]  *** Contents of shared directory: ***
[2025-11-26 18:19:06] total 1293144
[2025-11-26 18:19:06] -rw-r--r-- 2 boinc boinc 408816569 Nov 26 14:09 ATLAS.root_0
[2025-11-26 18:19:06] -rw-r--r-- 2 boinc boinc     15847 Nov 26 14:09 start_atlas.sh
[2025-11-26 18:19:06] -rw-r--r-- 2 boinc boinc    590108 Nov 26 14:09 input.tar.gz
[2025-11-26 18:19:06] -rw------- 1 boinc boinc 910974414 Nov 26 18:17 HITS.pool.root.1
[2025-11-26 18:19:06] -rw------- 1 boinc boinc   3768320 Nov 26 18:19 result.tar.gz
18:19:08 (2586977): run_atlas exited; CPU time 106566.993550
18:19:08 (2586977): called boinc_finish(0)

</stderr_txt>
]]>

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