Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
13:17:15 (3933551): wrapper (7.7.26015): starting
13:17:15 (3933551): wrapper: running run_atlas (--nthreads 9)
[2025-11-26 13:17:15] Arguments: --nthreads 9
[2025-11-26 13:17:15] Threads: 9
[2025-11-26 13:17:15] Checking for CVMFS
[2025-11-26 13:17:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 13:17:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 13:17:16] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 13:17:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 13:17:18] 2.13.3.0 9702 30401 323596 153331 1 162 30794184 32935936 25320 16776704 0 155918463 99.701 110439157 32822 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-26 13:17:18] CVMFS is ok
[2025-11-26 13:17:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 13:17:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 13:17:18] Further information can be found at the LHC@home message board.
[2025-11-26 13:17:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 13:17:18] Checking for apptainer binary...
[2025-11-26 13:17:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 13:17:18] Running /usr/bin/apptainer --version
[2025-11-26 13:17:18] apptainer version 1.4.4-1.el9
[2025-11-26 13:17:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 13:17:18] c-4-37.aglt2.org
[2025-11-26 13:17:18] apptainer works
[2025-11-26 13:17:18] Set ATHENA_PROC_NUMBER=9
[2025-11-26 13:17:18] Set ATHENA_CORE_NUMBER=9
[2025-11-26 13:17:18] Starting ATLAS job with PandaID=6891588092
[2025-11-26 13:17:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:44:24]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:44:24] 2025-11-27 18:43:23,837 | INFO     | monitor loop #5757: job 0:6891588092 is in state 'finished'
[2025-11-27 13:44:24] 2025-11-27 18:43:23,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:44:24] 2025-11-27 18:43:23,891 | INFO     | time since job start (87939s) is within the limit (172800.0s)
[2025-11-27 13:44:24] 2025-11-27 18:43:24,327 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 13:44:24] 2025-11-27 18:43:24,334 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8396500000003
[2025-11-27 13:44:24] 2025-11-27 18:43:24,340 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6891588092/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:44:24] 2025-11-27 18:43:24,341 | INFO     | extracted standard info from prmon json
[2025-11-27 13:44:24] 2025-11-27 18:43:24,341 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:44:24] 2025-11-27 18:43:24,341 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:44:24] 2025-11-27 18:43:24,356 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:44:24] 2025-11-27 18:43:24,358 | INFO     | sum of square deviations: 927849961134.199
[2025-11-27 13:44:24] 2025-11-27 18:43:24,388 | INFO     | sum of deviations: 4525769315524.158
[2025-11-27 13:44:24] 2025-11-27 18:43:24,388 | INFO     | mean x: 1764225042.0687022
[2025-11-27 13:44:24] 2025-11-27 18:43:24,388 | INFO     | mean y: 3154852.877168633
[2025-11-27 13:44:24] 2025-11-27 18:43:24,388 | INFO     | intersect: -8602197192.742004
[2025-11-27 13:44:24] 2025-11-27 18:43:24,389 | INFO     | chi2: 7.369136403008404
[2025-11-27 13:44:24] 2025-11-27 18:43:24,391 | INFO     | sum of square deviations: 918225673623.4675
[2025-11-27 13:44:24] 2025-11-27 18:43:24,436 | INFO     | sum of deviations: 5064638924928.514
[2025-11-27 13:44:24] 2025-11-27 18:43:24,437 | INFO     | mean x: 1764224889.5724235
[2025-11-27 13:44:24] 2025-11-27 18:43:24,437 | INFO     | mean y: 3163390.341225627
[2025-11-27 13:44:24] 2025-11-27 18:43:24,437 | INFO     | intersect: -9727736436.056139
[2025-11-27 13:44:24] 2025-11-27 18:43:24,439 | INFO     | chi2: 4.149785460983039
[2025-11-27 13:44:24] 2025-11-27 18:43:24,439 | INFO     | current chi2=4.149785460983039 (change=43.68695008428783 %)
[2025-11-27 13:44:24] 2025-11-27 18:43:24,441 | INFO     | sum of square deviations: 908668178062.6968
[2025-11-27 13:44:24] 2025-11-27 18:43:24,489 | INFO     | sum of deviations: 5301320471355.99
[2025-11-27 13:44:24] 2025-11-27 18:43:24,490 | INFO     | mean x: 1764224737.0761704
[2025-11-27 13:44:24] 2025-11-27 18:43:24,490 | INFO     | mean y: 3167164.8441649196
[2025-11-27 13:44:24] 2025-11-27 18:43:24,490 | INFO     | intersect: -10289611806.105137
[2025-11-27 13:44:24] 2025-11-27 18:43:24,492 | INFO     | chi2: 3.3493901895517477
[2025-11-27 13:44:24] 2025-11-27 18:43:24,492 | INFO     | current chi2=3.3493901895517477 (change=19.287630142732397 %)
[2025-11-27 13:44:24] 2025-11-27 18:43:24,492 | INFO     | right removable region: 1430
[2025-11-27 13:44:24] 2025-11-27 18:43:24,494 | INFO     | sum of square deviations: 918224734223.4692
[2025-11-27 13:44:24] 2025-11-27 18:43:24,544 | INFO     | sum of deviations: 4022229910635.866
[2025-11-27 13:44:24] 2025-11-27 18:43:24,544 | INFO     | mean x: 1764225194.5724235
[2025-11-27 13:44:24] 2025-11-27 18:43:24,544 | INFO     | mean y: 3162827.693593315
[2025-11-27 13:44:24] 2025-11-27 18:43:24,544 | INFO     | intersect: -7724922772.949347
[2025-11-27 13:44:24] 2025-11-27 18:43:24,546 | INFO     | chi2: 4.73930171698228
[2025-11-27 13:44:24] 2025-11-27 18:43:24,546 | INFO     | current chi2=4.73930171698228 (change=35.687148971112954 %)
[2025-11-27 13:44:24] 2025-11-27 18:43:24,548 | INFO     | sum of square deviations: 908666737248.4412
[2025-11-27 13:44:24] 2025-11-27 18:43:24,598 | INFO     | sum of deviations: 3891318734692.638
[2025-11-27 13:44:24] 2025-11-27 18:43:24,598 | INFO     | mean x: 1764225347.0726764
[2025-11-27 13:44:24] 2025-11-27 18:43:24,598 | INFO     | mean y: 3164916.080363382
[2025-11-27 13:44:24] 2025-11-27 18:43:24,598 | INFO     | intersect: -7552039719.308974
[2025-11-27 13:44:24] 2025-11-27 18:43:24,600 | INFO     | chi2: 4.652126866720774
[2025-11-27 13:44:24] 2025-11-27 18:43:24,600 | INFO     | current chi2=4.652126866720774 (change=1.8394028375347613 %)
[2025-11-27 13:44:24] 2025-11-27 18:43:24,601 | INFO     | left removable region: 20
[2025-11-27 13:44:24] 2025-11-27 18:43:24,602 | INFO     | sum of square deviations: 869248016382.4564
[2025-11-27 13:44:24] 2025-11-27 18:43:24,651 | INFO     | sum of deviations: 4492538367313.029
[2025-11-27 13:44:24] 2025-11-27 18:43:24,651 | INFO     | mean x: 1764225316.584397
[2025-11-27 13:44:24] 2025-11-27 18:43:24,651 | INFO     | mean y: 3180827.0375886527
[2025-11-27 13:44:24] 2025-11-27 18:43:24,651 | INFO     | intersect: -9114872678.940298
[2025-11-27 13:44:24] 2025-11-27 18:43:24,653 | INFO     | chi2: 0.5241516125059997
[2025-11-27 13:44:24] 2025-11-27 18:43:24,653 | INFO     | current memory leak: 5.17 B/s (using 1410 data points, chi2=0.52)
[2025-11-27 13:44:24] 2025-11-27 18:43:24,655 | INFO     | could have reported an average CPU frequency of 2599 MHz (52 samples)
[2025-11-27 13:44:24] 2025-11-27 18:43:24,655 | INFO     | ..............................
[2025-11-27 13:44:24] 2025-11-27 18:43:24,655 | INFO     | . Timing measurements:
[2025-11-27 13:44:24] 2025-11-27 18:43:24,655 | INFO     | . get job = 0 s
[2025-11-27 13:44:24] 2025-11-27 18:43:24,655 | INFO     | . initial setup = 5 s
[2025-11-27 13:44:24] 2025-11-27 18:43:24,655 | INFO     | . payload setup = 14 s
[2025-11-27 13:44:24] 2025-11-27 18:43:24,656 | INFO     | . stage-in = 0 s
[2025-11-27 13:44:24] 2025-11-27 18:43:24,656 | INFO     | . payload execution = 87869 s
[2025-11-27 13:44:24] 2025-11-27 18:43:24,656 | INFO     | . stage-out = 5 s
[2025-11-27 13:44:24] 2025-11-27 18:43:24,656 | INFO     | . log creation = 1 s
[2025-11-27 13:44:24] 2025-11-27 18:43:24,656 | INFO     | ..............................
[2025-11-27 13:44:24] 2025-11-27 18:43:25,275 | INFO     | 
[2025-11-27 13:44:24] 2025-11-27 18:43:25,275 | INFO     | job summary report
[2025-11-27 13:44:24] 2025-11-27 18:43:25,275 | INFO     | --------------------------------------------------
[2025-11-27 13:44:24] 2025-11-27 18:43:25,275 | INFO     | PanDA job id: 6891588092
[2025-11-27 13:44:24] 2025-11-27 18:43:25,275 | INFO     | task id: 47493068
[2025-11-27 13:44:24] 2025-11-27 18:43:25,275 | INFO     | errors: (none)
[2025-11-27 13:44:24] 2025-11-27 18:43:25,276 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:44:24] 2025-11-27 18:43:25,276 | INFO     | pilot state: finished 
[2025-11-27 13:44:24] 2025-11-27 18:43:25,276 | INFO     | transexitcode: 0
[2025-11-27 13:44:24] 2025-11-27 18:43:25,276 | INFO     | exeerrorcode: 0
[2025-11-27 13:44:24] 2025-11-27 18:43:25,276 | INFO     | exeerrordiag: 
[2025-11-27 13:44:24] 2025-11-27 18:43:25,276 | INFO     | exitcode: 0
[2025-11-27 13:44:24] 2025-11-27 18:43:25,276 | INFO     | exitmsg: OK
[2025-11-27 13:44:24] 2025-11-27 18:43:25,276 | INFO     | cpuconsumptiontime: 301802 s
[2025-11-27 13:44:24] 2025-11-27 18:43:25,276 | INFO     | nevents: 1000
[2025-11-27 13:44:24] 2025-11-27 18:43:25,276 | INFO     | neventsw: 0
[2025-11-27 13:44:24] 2025-11-27 18:43:25,277 | INFO     | pid: 3946661
[2025-11-27 13:44:24] 2025-11-27 18:43:25,277 | INFO     | pgrp: 3946661
[2025-11-27 13:44:24] 2025-11-27 18:43:25,277 | INFO     | corecount: 9
[2025-11-27 13:44:24] 2025-11-27 18:43:25,277 | INFO     | event service: False
[2025-11-27 13:44:24] 2025-11-27 18:43:25,277 | INFO     | sizes: {0: 2284133, 1: 2284332, 12: 2284332, 13: 2284622, 23: 2284678, 87888: 2352399, 87895: 2361421, 87898: 2361477, 87906: 2361723}
[2025-11-27 13:44:24] 2025-11-27 18:43:25,277 | INFO     | --------------------------------------------------
[2025-11-27 13:44:24] 2025-11-27 18:43:25,277 | INFO     | 
[2025-11-27 13:44:24] 2025-11-27 18:43:25,277 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-27 13:44:24] 2025-11-27 18:43:25,298 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,299 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,299 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,299 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,299 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,299 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,299 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,299 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,299 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,299 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,300 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,300 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,300 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,300 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,300 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,300 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,300 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,300 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:44:24] 2025-11-27 18:43:25,300 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,301 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:44:24] 2025-11-27 18:43:25,301 | INFO     | job 6891588092 has completed (purged errors)
[2025-11-27 13:44:24] 2025-11-27 18:43:25,301 | INFO     | overall cleanup function is called
[2025-11-27 13:44:24] 2025-11-27 18:43:26,319 | INFO     | --- collectZombieJob: --- 10, [3946661]
[2025-11-27 13:44:24] 2025-11-27 18:43:26,319 | INFO     | zombie collector waiting for pid 3946661
[2025-11-27 13:44:24] 2025-11-27 18:43:26,319 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:44:24] 2025-11-27 18:43:26,319 | INFO     | collected zombie processes
[2025-11-27 13:44:24] 2025-11-27 18:43:26,320 | INFO     | will attempt to kill all subprocesses of pid=3946661
[2025-11-27 13:44:24] 2025-11-27 18:43:26,815 | INFO     | process IDs to be killed: [3946661] (in reverse order)
[2025-11-27 13:44:24] 2025-11-27 18:43:26,994 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:44:24] 2025-11-27 18:43:26,994 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:44:24] 2025-11-27 18:43:27,009 | INFO     | did not find any defunct processes belonging to 3946661
[2025-11-27 13:44:24] 2025-11-27 18:43:27,024 | INFO     | did not find any defunct processes belonging to 3946661
[2025-11-27 13:44:24] 2025-11-27 18:43:27,025 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:44:24] 2025-11-27 18:43:27,025 | INFO     | ready for new job
[2025-11-27 13:44:24] 2025-11-27 18:43:27,025 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:44:24] 2025-11-27 18:43:27,031 | INFO     | ***************************************
[2025-11-27 13:44:24] 2025-11-27 18:43:27,031 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:44:24] 2025-11-27 18:43:27,031 | INFO     | ***************************************
[2025-11-27 13:44:24] 2025-11-27 18:43:27,031 | INFO     | 
[2025-11-27 13:44:24] 2025-11-27 18:43:27,033 | INFO     | architecture information:
[2025-11-27 13:44:24] 2025-11-27 18:43:27,034 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:44:24] 2025-11-27 18:43:27,052 | INFO     | cat /etc/os-release:
[2025-11-27 13:44:24] NAME="CentOS Linux"
[2025-11-27 13:44:24] VERSION="7 (Core)"
[2025-11-27 13:44:24] ID="centos"
[2025-11-27 13:44:24] ID_LIKE="rhel fedora"
[2025-11-27 13:44:24] VERSION_ID="7"
[2025-11-27 13:44:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:44:24] ANSI_COLOR="0;31"
[2025-11-27 13:44:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:44:24] HOME_URL="https://www.centos.org/"
[2025-11-27 13:44:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:44:24] 
[2025-11-27 13:44:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:44:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:44:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:44:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:44:24] 
[2025-11-27 13:44:24] 2025-11-27 18:43:27,052 | INFO     | ***************************************
[2025-11-27 13:44:24] 2025-11-27 18:43:27,555 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-27 13:44:24] 2025-11-27 18:43:27,575 | INFO     | sufficient remaining disk space (72706162688 B)
[2025-11-27 13:44:24] 2025-11-27 18:43:27,576 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:44:24] 2025-11-27 18:43:27,576 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:44:24] 2025-11-27 18:43:27,576 | INFO     | update_server=False
[2025-11-27 13:44:24] 2025-11-27 18:43:27,576 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:44:24] 2025-11-27 18:43:27,576 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:44:24] 2025-11-27 18:43:27,576 | INFO     | aborting loop
[2025-11-27 13:44:24] 2025-11-27 18:43:27,578 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:44:24] 2025-11-27 18:43:27,625 | INFO     | all data control threads have been joined
[2025-11-27 13:44:24] 2025-11-27 18:43:27,849 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:44:24] 2025-11-27 18:43:28,364 | INFO     | all job control threads have been joined
[2025-11-27 13:44:24] 2025-11-27 18:43:28,529 | INFO     | all payload control threads have been joined
[2025-11-27 13:44:24] 2025-11-27 18:43:28,582 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:28,606 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:28,631 | INFO     | [data] control thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,049 | INFO     | [job] validate thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,299 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,350 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,402 | INFO     | [job] control thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,454 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,460 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,513 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,535 | INFO     | [payload] control thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,585 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:29,821 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:44:24] 2025-11-27 18:43:30,035 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:30,826 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:31,870 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:44:24] 2025-11-27 18:43:57,563 | INFO     | PID=3938303 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 13:44:24] 2025-11-27 18:43:57,564 | INFO     | .. there are 42 such processes running
[2025-11-27 13:44:24] 2025-11-27 18:43:57,564 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:44:24] 2025-11-27 18:43:57,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:44:24] 2025-11-27 18:43:57,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:44:24] 2025-11-27 18:44:17,815 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:44:24] 2025-11-27 18:44:19,111 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140291415074624)>', '<ExcThread(monitor, started 140290937579264)>']
[2025-11-27 13:44:24] 2025-11-27 18:44:19,721 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:44:24] 2025-11-27 18:44:19,721 | INFO     | [monitor] control thread has ended
[2025-11-27 13:44:24] 2025-11-27 18:44:24,137 | INFO     | all workflow threads have been joined
[2025-11-27 13:44:24] 2025-11-27 18:44:24,137 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:44:24] 2025-11-27 18:44:24,137 | INFO     | traces error code: 0
[2025-11-27 13:44:24] 2025-11-27 18:44:24,138 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:44:24] 2025-11-27 18:44:24,300 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:44:24] 2025-11-27 18:44:24,303 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:44:24] 2025-11-27 18:44:24,305 [wrapper] pilotpid: 3938303
[2025-11-27 13:44:24] 2025-11-27 18:44:24,308 [wrapper] Pilot exit status: 0
[2025-11-27 13:44:24] 2025-11-27 18:44:24,320 [wrapper] pandaids: 6891588092
[2025-11-27 13:44:24] 2025-11-27 18:44:24,412 [wrapper] cleanup supervisor_pilot 1149888 3938304
[2025-11-27 13:44:24] 2025-11-27 18:44:24,415 [wrapper] Test setup, not cleaning
[2025-11-27 13:44:24] 2025-11-27 18:44:24,418 [wrapper] apfmon messages muted
[2025-11-27 13:44:24] 2025-11-27 18:44:24,421 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:44:24] 2025-11-27 18:44:24,423 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:44:24]  *** Error codes and diagnostics ***
[2025-11-27 13:44:24]     "exeErrorCode": 0,
[2025-11-27 13:44:24]     "exeErrorDiag": "",
[2025-11-27 13:44:24]     "pilotErrorCode": 0,
[2025-11-27 13:44:24]     "pilotErrorDiag": "",
[2025-11-27 13:44:24]  *** Listing of results directory ***
[2025-11-27 13:44:24] total 1331228
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas    576529 Nov 18 12:24 pilot3.tar.gz
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas      5112 Nov 18 12:32 queuedata.json
[2025-11-27 13:44:24] -rwx------. 1 boincer umatlas     36292 Nov 18 12:33 runpilot2-wrapper.sh
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas       100 Nov 26 13:17 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:44:24] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 26 13:17 run_atlas
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas       105 Nov 26 13:17 job.xml
[2025-11-27 13:44:24] -rw-r--r--. 2 boincer umatlas 410370459 Nov 26 13:17 EVNT.47493065._000505.pool.root.1
[2025-11-27 13:44:24] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 13:17 start_atlas.sh
[2025-11-27 13:44:24] drwxrwx--x. 2 boincer umatlas      4096 Nov 26 13:17 shared
[2025-11-27 13:44:24] -rw-r--r--. 2 boincer umatlas    590095 Nov 26 13:17 input.tar.gz
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas         0 Nov 26 13:17 boinc_lockfile
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas      2773 Nov 26 13:17 pandaJob.out
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas    991522 Nov 26 13:17 agis_schedconf.cvmfs.json
[2025-11-27 13:44:24] drwx------. 5 boincer umatlas      4096 Nov 26 13:17 pilot3
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas       533 Nov 27 13:29 boinc_task_state.xml
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas      6661 Nov 27 13:38 init_data.xml
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas 920271879 Nov 27 13:42 HITS.47493068._005050.pool.root.1
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas      1059 Nov 27 13:43 memory_monitor_summary.json
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas   1516240 Nov 27 13:43 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas   2618157 Nov 27 13:43 log.47493068._005050.job.log.tgz.1
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas        95 Nov 27 13:43 pilot_heartbeat.json
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas      8618 Nov 27 13:43 heartbeat.json
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas        29 Nov 27 13:44 wrapper_checkpoint.txt
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas      8192 Nov 27 13:44 boinc_mmap_file
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas      4824 Nov 27 13:44 pilotlog.txt
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas  11691716 Nov 27 13:44 log.47493068._005050.job.log.1
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas       353 Nov 27 13:44 output.list
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas       620 Nov 27 13:44 runtime_log
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas  14325760 Nov 27 13:44 result.tar.gz
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas      8694 Nov 27 13:44 runtime_log.err
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas       658 Nov 27 13:44 MsjLDm2kef8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmO5FKDmJT7E7m.diag
[2025-11-27 13:44:24] -rw-r--r--. 1 boincer umatlas     21345 Nov 27 13:44 stderr.txt
[2025-11-27 13:44:24] HITS file was successfully produced:
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas 920271879 Nov 27 13:42 shared/HITS.pool.root.1
[2025-11-27 13:44:24]  *** Contents of shared directory: ***
[2025-11-27 13:44:24] total 1314052
[2025-11-27 13:44:24] -rw-r--r--. 2 boincer umatlas 410370459 Nov 26 13:17 ATLAS.root_0
[2025-11-27 13:44:24] -rw-r--r--. 2 boincer umatlas     15120 Nov 26 13:17 start_atlas.sh
[2025-11-27 13:44:24] -rw-r--r--. 2 boincer umatlas    590095 Nov 26 13:17 input.tar.gz
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas 920271879 Nov 27 13:42 HITS.pool.root.1
[2025-11-27 13:44:24] -rw-------. 1 boincer umatlas  14325760 Nov 27 13:44 result.tar.gz
13:44:46 (3933551): run_atlas exited; CPU time 304451.310745
13:44:46 (3933551): called boinc_finish(0)

</stderr_txt>
]]>

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