Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:27:21 (7668): wrapper (7.7.26015): starting
12:27:21 (7668): wrapper: running run_atlas (--nthreads 12)
[2025-11-26 12:27:21] Arguments: --nthreads 12
[2025-11-26 12:27:21] Threads: 12
[2025-11-26 12:27:21] Checking for CVMFS
[2025-11-26 12:27:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-26 12:27:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-26 12:27:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-26 12:27:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-26 12:27:21] 2.11.2.0 723 117928 95068 153330 1 81 19635193 20275200 1 130560 0 50661726 99.904 6845390 33691 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-26 12:27:21] CVMFS is ok
[2025-11-26 12:27:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 12:27:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 12:27:21] Further information can be found at the LHC@home message board.
[2025-11-26 12:27:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 12:27:21] Checking for apptainer binary...
[2025-11-26 12:27:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-26 12:27:21] Running /usr/bin/apptainer --version
[2025-11-26 12:27:21] apptainer version 1.3.2-1.el7
[2025-11-26 12:27:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 12:27:23] c-205-1.aglt2.org
[2025-11-26 12:27:23] apptainer works
[2025-11-26 12:27:23] Set ATHENA_PROC_NUMBER=12
[2025-11-26 12:27:23] Set ATHENA_CORE_NUMBER=12
[2025-11-26 12:27:23] Starting ATLAS job with PandaID=6897372668
[2025-11-26 12:27:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 19:35:26]  *** The last 200 lines of the pilot log: ***
[2025-11-26 19:35:26] 2025-11-27 00:34:27,881 | INFO     | monitor loop #1920: job 0:6897372668 is in state 'finished'
[2025-11-26 19:35:26] 2025-11-27 00:34:27,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 19:35:26] 2025-11-27 00:34:28,378 | INFO     | time since job start (25609s) is within the limit (172800.0s)
[2025-11-26 19:35:26] 2025-11-27 00:34:29,984 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-26 19:35:26] 2025-11-27 00:34:29,988 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-11-26 19:35:26] 2025-11-27 00:34:29,989 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897372668/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 19:35:26] 2025-11-27 00:34:29,990 | INFO     | extracted standard info from prmon json
[2025-11-26 19:35:26] 2025-11-27 00:34:29,990 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 19:35:26] 2025-11-27 00:34:29,990 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 19:35:26] 2025-11-27 00:34:29,997 | INFO     | fitting pss+swap vs Time
[2025-11-26 19:35:26] 2025-11-27 00:34:29,997 | INFO     | sum of square deviations: 22973410447.247707
[2025-11-26 19:35:26] 2025-11-27 00:34:30,001 | INFO     | sum of deviations: 332652650237.0575
[2025-11-26 19:35:26] 2025-11-27 00:34:30,001 | INFO     | mean x: 1764190868.6809523
[2025-11-26 19:35:26] 2025-11-27 00:34:30,001 | INFO     | mean y: 3415001.157142857
[2025-11-26 19:35:26] 2025-11-27 00:34:30,001 | INFO     | intersect: -25541889616.905937
[2025-11-26 19:35:26] 2025-11-27 00:34:30,002 | INFO     | chi2: 6.178098476431991
[2025-11-26 19:35:26] 2025-11-27 00:34:30,002 | INFO     | sum of square deviations: 22162683542.081882
[2025-11-26 19:35:26] 2025-11-27 00:34:30,006 | INFO     | sum of deviations: 495451477801.6362
[2025-11-26 19:35:26] 2025-11-27 00:34:30,006 | INFO     | mean x: 1764190716.1831326
[2025-11-26 19:35:26] 2025-11-27 00:34:30,006 | INFO     | mean y: 3445588.83373494
[2025-11-26 19:35:26] 2025-11-27 00:34:30,006 | INFO     | intersect: -39435410982.71812
[2025-11-26 19:35:26] 2025-11-27 00:34:30,007 | INFO     | chi2: 3.0781420792825345
[2025-11-26 19:35:26] 2025-11-27 00:34:30,007 | INFO     | current chi2=3.0781420792825345 (change=50.17654556616521 %)
[2025-11-26 19:35:26] 2025-11-27 00:34:30,007 | INFO     | sum of square deviations: 21371259324.41216
[2025-11-26 19:35:26] 2025-11-27 00:34:30,011 | INFO     | sum of deviations: 543239975161.35785
[2025-11-26 19:35:26] 2025-11-27 00:34:30,011 | INFO     | mean x: 1764190563.685366
[2025-11-26 19:35:26] 2025-11-27 00:34:30,011 | INFO     | mean y: 3454762.9097560975
[2025-11-26 19:35:26] 2025-11-27 00:34:30,011 | INFO     | intersect: -44840829958.374504
[2025-11-26 19:35:26] 2025-11-27 00:34:30,012 | INFO     | chi2: 2.611577771125886
[2025-11-26 19:35:26] 2025-11-27 00:34:30,012 | INFO     | current chi2=2.611577771125886 (change=15.157335046256126 %)
[2025-11-26 19:35:26] 2025-11-27 00:34:30,012 | INFO     | right removable region: 409
[2025-11-26 19:35:26] 2025-11-27 00:34:30,013 | INFO     | sum of square deviations: 22162637182.081882
[2025-11-26 19:35:26] 2025-11-27 00:34:30,016 | INFO     | sum of deviations: 188883807776.53766
[2025-11-26 19:35:26] 2025-11-27 00:34:30,017 | INFO     | mean x: 1764191021.1831326
[2025-11-26 19:35:26] 2025-11-27 00:34:30,017 | INFO     | mean y: 3441967.848192771
[2025-11-26 19:35:26] 2025-11-27 00:34:30,017 | INFO     | intersect: -15032093514.168226
[2025-11-26 19:35:26] 2025-11-27 00:34:30,017 | INFO     | chi2: 3.7194485174691074
[2025-11-26 19:35:26] 2025-11-27 00:34:30,017 | INFO     | current chi2=3.7194485174691074 (change=39.79622481483682 %)
[2025-11-26 19:35:26] 2025-11-27 00:34:30,018 | INFO     | sum of square deviations: 21371166604.41215
[2025-11-26 19:35:26] 2025-11-27 00:34:30,021 | INFO     | sum of deviations: 156525283967.08768
[2025-11-26 19:35:26] 2025-11-27 00:34:30,022 | INFO     | mean x: 1764191173.685366
[2025-11-26 19:35:26] 2025-11-27 00:34:30,022 | INFO     | mean y: 3448195.814634146
[2025-11-26 19:35:26] 2025-11-27 00:34:30,022 | INFO     | intersect: -12917724033.328974
[2025-11-26 19:35:26] 2025-11-27 00:34:30,022 | INFO     | chi2: 3.6593674867578043
[2025-11-26 19:35:26] 2025-11-27 00:34:30,022 | INFO     | current chi2=3.6593674867578043 (change=1.6153209388198535 %)
[2025-11-26 19:35:26] 2025-11-27 00:34:30,022 | INFO     | left removable region: 20
[2025-11-26 19:35:26] 2025-11-27 00:34:30,023 | INFO     | sum of square deviations: 18252677357.922928
[2025-11-26 19:35:26] 2025-11-27 00:34:30,026 | INFO     | sum of deviations: 323520107476.8276
[2025-11-26 19:35:26] 2025-11-27 00:34:30,026 | INFO     | mean x: 1764191143.1902313
[2025-11-26 19:35:26] 2025-11-27 00:34:30,026 | INFO     | mean y: 3497908.6915167095
[2025-11-26 19:35:26] 2025-11-27 00:34:30,027 | INFO     | intersect: -31265959007.820805
[2025-11-26 19:35:26] 2025-11-27 00:34:30,027 | INFO     | chi2: 0.028249423843305515
[2025-11-26 19:35:26] 2025-11-27 00:34:30,027 | INFO     | current memory leak: 17.72 B/s (using 389 data points, chi2=0.03)
[2025-11-26 19:35:26] 2025-11-27 00:34:30,028 | INFO     | could have reported an average CPU frequency of 2383 MHz (18 samples)
[2025-11-26 19:35:26] 2025-11-27 00:34:30,028 | INFO     | ..............................
[2025-11-26 19:35:26] 2025-11-27 00:34:30,028 | INFO     | . Timing measurements:
[2025-11-26 19:35:26] 2025-11-27 00:34:30,028 | INFO     | . get job = 0 s
[2025-11-26 19:35:26] 2025-11-27 00:34:30,028 | INFO     | . initial setup = 2 s
[2025-11-26 19:35:26] 2025-11-27 00:34:30,028 | INFO     | . payload setup = 8 s
[2025-11-26 19:35:26] 2025-11-27 00:34:30,028 | INFO     | . stage-in = 0 s
[2025-11-26 19:35:26] 2025-11-27 00:34:30,028 | INFO     | . payload execution = 25568 s
[2025-11-26 19:35:26] 2025-11-27 00:34:30,028 | INFO     | . stage-out = 3 s
[2025-11-26 19:35:26] 2025-11-27 00:34:30,029 | INFO     | . log creation = 0 s
[2025-11-26 19:35:26] 2025-11-27 00:34:30,029 | INFO     | ..............................
[2025-11-26 19:35:26] 2025-11-27 00:34:30,109 | INFO     | 
[2025-11-26 19:35:26] 2025-11-27 00:34:30,110 | INFO     | job summary report
[2025-11-26 19:35:26] 2025-11-27 00:34:30,110 | INFO     | --------------------------------------------------
[2025-11-26 19:35:26] 2025-11-27 00:34:30,110 | INFO     | PanDA job id: 6897372668
[2025-11-26 19:35:26] 2025-11-27 00:34:30,110 | INFO     | task id: 47556173
[2025-11-26 19:35:26] 2025-11-27 00:34:30,110 | INFO     | errors: (none)
[2025-11-26 19:35:26] 2025-11-27 00:34:30,110 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 19:35:26] 2025-11-27 00:34:30,111 | INFO     | pilot state: finished 
[2025-11-26 19:35:26] 2025-11-27 00:34:30,111 | INFO     | transexitcode: 0
[2025-11-26 19:35:26] 2025-11-27 00:34:30,111 | INFO     | exeerrorcode: 0
[2025-11-26 19:35:26] 2025-11-27 00:34:30,111 | INFO     | exeerrordiag: 
[2025-11-26 19:35:26] 2025-11-27 00:34:30,111 | INFO     | exitcode: 0
[2025-11-26 19:35:26] 2025-11-27 00:34:30,111 | INFO     | exitmsg: OK
[2025-11-26 19:35:26] 2025-11-27 00:34:30,112 | INFO     | cpuconsumptiontime: 293077 s
[2025-11-26 19:35:26] 2025-11-27 00:34:30,112 | INFO     | nevents: 1000
[2025-11-26 19:35:26] 2025-11-27 00:34:30,112 | INFO     | neventsw: 0
[2025-11-26 19:35:26] 2025-11-27 00:34:30,112 | INFO     | pid: 17873
[2025-11-26 19:35:26] 2025-11-27 00:34:30,112 | INFO     | pgrp: 17873
[2025-11-26 19:35:26] 2025-11-27 00:34:30,112 | INFO     | corecount: 12
[2025-11-26 19:35:26] 2025-11-27 00:34:30,113 | INFO     | event service: False
[2025-11-26 19:35:26] 2025-11-27 00:34:30,113 | INFO     | sizes: {0: 2283435, 1: 2284291, 6: 2284553, 12: 2284581, 25580: 2321760, 25583: 2330754, 25586: 2330938, 25594: 2331184}
[2025-11-26 19:35:26] 2025-11-27 00:34:30,113 | INFO     | --------------------------------------------------
[2025-11-26 19:35:26] 2025-11-27 00:34:30,113 | INFO     | 
[2025-11-26 19:35:26] 2025-11-27 00:34:30,113 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-26 19:35:26] 2025-11-27 00:34:30,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,139 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,139 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,139 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,139 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,140 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,140 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,140 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 19:35:26] 2025-11-27 00:34:30,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,141 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 19:35:26] 2025-11-27 00:34:30,141 | INFO     | job 6897372668 has completed (purged errors)
[2025-11-26 19:35:26] 2025-11-27 00:34:30,141 | INFO     | overall cleanup function is called
[2025-11-26 19:35:26] 2025-11-27 00:34:31,153 | INFO     | --- collectZombieJob: --- 10, [17873]
[2025-11-26 19:35:26] 2025-11-27 00:34:31,154 | INFO     | zombie collector waiting for pid 17873
[2025-11-26 19:35:26] 2025-11-27 00:34:31,154 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 19:35:26] 2025-11-27 00:34:31,154 | INFO     | collected zombie processes
[2025-11-26 19:35:26] 2025-11-27 00:34:31,154 | INFO     | will attempt to kill all subprocesses of pid=17873
[2025-11-26 19:35:26] 2025-11-27 00:34:31,245 | INFO     | process IDs to be killed: [17873] (in reverse order)
[2025-11-26 19:35:26] 2025-11-27 00:34:31,300 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 19:35:26] 2025-11-27 00:34:31,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 19:35:26] 2025-11-27 00:34:31,304 | INFO     | did not find any defunct processes belonging to 17873
[2025-11-26 19:35:26] 2025-11-27 00:34:31,307 | INFO     | did not find any defunct processes belonging to 17873
[2025-11-26 19:35:26] 2025-11-27 00:34:31,309 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 19:35:26] 2025-11-27 00:34:31,309 | INFO     | ready for new job
[2025-11-26 19:35:26] 2025-11-27 00:34:31,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 19:35:26] 2025-11-27 00:34:31,311 | INFO     | ***************************************
[2025-11-26 19:35:26] 2025-11-27 00:34:31,311 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 19:35:26] 2025-11-27 00:34:31,312 | INFO     | ***************************************
[2025-11-26 19:35:26] 2025-11-27 00:34:31,312 | INFO     | 
[2025-11-26 19:35:26] 2025-11-27 00:34:31,312 | INFO     | architecture information:
[2025-11-26 19:35:26] 2025-11-27 00:34:31,313 | INFO     | executing command: cat /etc/os-release
[2025-11-26 19:35:26] 2025-11-27 00:34:31,329 | INFO     | cat /etc/os-release:
[2025-11-26 19:35:26] NAME="CentOS Linux"
[2025-11-26 19:35:26] VERSION="7 (Core)"
[2025-11-26 19:35:26] ID="centos"
[2025-11-26 19:35:26] ID_LIKE="rhel fedora"
[2025-11-26 19:35:26] VERSION_ID="7"
[2025-11-26 19:35:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 19:35:26] ANSI_COLOR="0;31"
[2025-11-26 19:35:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 19:35:26] HOME_URL="https://www.centos.org/"
[2025-11-26 19:35:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 19:35:26] 
[2025-11-26 19:35:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 19:35:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 19:35:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 19:35:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 19:35:26] 
[2025-11-26 19:35:26] 2025-11-27 00:34:31,330 | INFO     | ***************************************
[2025-11-26 19:35:26] 2025-11-27 00:34:31,833 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-26 19:35:26] 2025-11-27 00:34:31,852 | INFO     | sufficient remaining disk space (28390195200 B)
[2025-11-26 19:35:26] 2025-11-27 00:34:31,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 19:35:26] 2025-11-27 00:34:31,852 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 19:35:26] 2025-11-27 00:34:31,852 | INFO     | update_server=False
[2025-11-26 19:35:26] 2025-11-27 00:34:31,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 19:35:26] 2025-11-27 00:34:31,853 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:35:26] 2025-11-27 00:34:31,854 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 19:35:26] 2025-11-27 00:34:31,854 | INFO     | aborting loop
[2025-11-26 19:35:26] 2025-11-27 00:34:31,918 | INFO     | all data control threads have been joined
[2025-11-26 19:35:26] 2025-11-27 00:34:32,226 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 19:35:26] 2025-11-27 00:34:32,394 | INFO     | all payload control threads have been joined
[2025-11-26 19:35:26] 2025-11-27 00:34:32,732 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 19:35:26] 2025-11-27 00:34:32,858 | INFO     | [job] job monitor thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:32,858 | INFO     | [job] retrieve thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:32,859 | INFO     | [job] queue monitor thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:32,924 | INFO     | [data] control thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:32,931 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:32,932 | INFO     | [data] copytool_in thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:33,096 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:33,338 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:33,399 | INFO     | [payload] control thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:33,559 | INFO     | all job control threads have been joined
[2025-11-26 19:35:26] 2025-11-27 00:34:34,114 | INFO     | [payload] failed_post thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:34,231 | INFO     | [data] copytool_out thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:34,270 | INFO     | [payload] validate_post thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:34,339 | INFO     | [job] validate thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:34,564 | INFO     | [job] control thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:36,737 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:34:41,906 | INFO     | job.realtimelogging is not enabled
[2025-11-26 19:35:26] 2025-11-27 00:34:42,912 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 19:35:26] 2025-11-27 00:35:01,580 | INFO     | PID=11369 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-26 19:35:26] 2025-11-27 00:35:01,581 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 19:35:26] 2025-11-27 00:35:01,581 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 19:35:26] 2025-11-27 00:35:01,581 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 19:35:26] 2025-11-27 00:35:20,642 | INFO     | [monitor] cgroup control has ended
[2025-11-26 19:35:26] 2025-11-27 00:35:21,190 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140565597968192)>', '<ExcThread(monitor, started 140564943070976)>']
[2025-11-26 19:35:26] 2025-11-27 00:35:21,677 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 19:35:26] 2025-11-27 00:35:21,677 | INFO     | [monitor] control thread has ended
[2025-11-26 19:35:26] 2025-11-27 00:35:26,198 | INFO     | all workflow threads have been joined
[2025-11-26 19:35:26] 2025-11-27 00:35:26,198 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 19:35:26] 2025-11-27 00:35:26,206 | INFO     | traces error code: 0
[2025-11-26 19:35:26] 2025-11-27 00:35:26,206 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 19:35:26] 2025-11-27 00:35:26,305 [wrapper] ==== pilot stdout END ====
[2025-11-26 19:35:26] 2025-11-27 00:35:26,309 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 19:35:26] 2025-11-27 00:35:26,313 [wrapper] pilotpid: 11369
[2025-11-26 19:35:26] 2025-11-27 00:35:26,317 [wrapper] Pilot exit status: 0
[2025-11-26 19:35:26] 2025-11-27 00:35:26,332 [wrapper] pandaids: 6897372668
[2025-11-26 19:35:26] 2025-11-27 00:35:26,379 [wrapper] cleanup supervisor_pilot 13125 11370
[2025-11-26 19:35:26] 2025-11-27 00:35:26,383 [wrapper] Test setup, not cleaning
[2025-11-26 19:35:26] 2025-11-27 00:35:26,387 [wrapper] apfmon messages muted
[2025-11-26 19:35:26] 2025-11-27 00:35:26,391 [wrapper] ==== wrapper stdout END ====
[2025-11-26 19:35:26] 2025-11-27 00:35:26,394 [wrapper] ==== wrapper stderr END ====
[2025-11-26 19:35:26]  *** Error codes and diagnostics ***
[2025-11-26 19:35:26]     "exeErrorCode": 0,
[2025-11-26 19:35:26]     "exeErrorDiag": "",
[2025-11-26 19:35:26]     "pilotErrorCode": 0,
[2025-11-26 19:35:26]     "pilotErrorDiag": "",
[2025-11-26 19:35:26]  *** Listing of results directory ***
[2025-11-26 19:35:26] total 1296612
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas    576529 Nov 25 11:48 pilot3.tar.gz
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas      5112 Nov 25 11:55 queuedata.json
[2025-11-26 19:35:26] -rwx------ 1 boincer umatlas     36292 Nov 25 11:57 runpilot2-wrapper.sh
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas       100 Nov 26 12:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 19:35:26] -rwxr-xr-x 1 boincer umatlas      7986 Nov 26 12:27 run_atlas
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas       105 Nov 26 12:27 job.xml
[2025-11-26 19:35:26] -rw-r--r-- 2 boincer umatlas 407264294 Nov 26 12:27 EVNT.47483658._003090.pool.root.1
[2025-11-26 19:35:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 12:27 start_atlas.sh
[2025-11-26 19:35:26] drwxrwx--x 2 boincer umatlas      4096 Nov 26 12:27 shared
[2025-11-26 19:35:26] -rw-r--r-- 2 boincer umatlas    590101 Nov 26 12:27 input.tar.gz
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas         0 Nov 26 12:27 boinc_lockfile
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas      2785 Nov 26 12:27 pandaJob.out
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas        57 Nov 26 12:27 setup.sh.local
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas    991530 Nov 26 12:27 agis_schedconf.cvmfs.json
[2025-11-26 19:35:26] drwx------ 5 boincer umatlas      4096 Nov 26 12:27 pilot3
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas       532 Nov 26 19:25 boinc_task_state.xml
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas      5954 Nov 26 19:30 init_data.xml
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas 905008487 Nov 26 19:33 HITS.47556173._000726.pool.root.1
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas      1060 Nov 26 19:34 memory_monitor_summary.json
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas   1516240 Nov 26 19:34 agis_ddmendpoints.agis.ALL.json
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas   2176233 Nov 26 19:34 log.47556173._000726.job.log.tgz.1
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas      8664 Nov 26 19:34 heartbeat.json
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas        95 Nov 26 19:35 pilot_heartbeat.json
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas      8192 Nov 26 19:35 boinc_mmap_file
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas        29 Nov 26 19:35 wrapper_checkpoint.txt
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas      4818 Nov 26 19:35 pilotlog.txt
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas   3589965 Nov 26 19:35 log.47556173._000726.job.log.1
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas       353 Nov 26 19:35 output.list
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas       620 Nov 26 19:35 runtime_log
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas   5785600 Nov 26 19:35 result.tar.gz
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas       669 Nov 26 19:35 veNODm6WBi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGaJKDmmgFDHn.diag
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas      9340 Nov 26 19:35 runtime_log.err
[2025-11-26 19:35:26] -rw-r--r-- 1 boincer umatlas     21308 Nov 26 19:35 stderr.txt
[2025-11-26 19:35:26] HITS file was successfully produced:
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas 905008487 Nov 26 19:33 shared/HITS.pool.root.1
[2025-11-26 19:35:26]  *** Contents of shared directory: ***
[2025-11-26 19:35:26] total 1287776
[2025-11-26 19:35:26] -rw-r--r-- 2 boincer umatlas 407264294 Nov 26 12:27 ATLAS.root_0
[2025-11-26 19:35:26] -rw-r--r-- 2 boincer umatlas     15847 Nov 26 12:27 start_atlas.sh
[2025-11-26 19:35:26] -rw-r--r-- 2 boincer umatlas    590101 Nov 26 12:27 input.tar.gz
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas 905008487 Nov 26 19:33 HITS.pool.root.1
[2025-11-26 19:35:26] -rw------- 1 boincer umatlas   5785600 Nov 26 19:35 result.tar.gz
19:35:27 (7668): run_atlas exited; CPU time 286462.670405
19:35:27 (7668): called boinc_finish(0)

</stderr_txt>
]]>

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